Experiment: Nickel (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25255 and AO353_25260 are separated by 15 nucleotides AO353_25260 and AO353_25265 are separated by 112 nucleotides
AO353_25255: AO353_25255 - large subunit of pyruvate transporter (CstA) (from data) , at 5,570,728 to 5,572,785
_25255
AO353_25260: AO353_25260 - hypothetical protein, at 5,572,801 to 5,572,998
_25260
AO353_25265: AO353_25265 - chemotaxis protein, at 5,573,111 to 5,574,730
_25265
Position (kb)
5572
5573 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5571.895 kb on + strand, within AO353_25255 at 5571.941 kb on + strand, within AO353_25255 at 5571.942 kb on - strand, within AO353_25255 at 5571.982 kb on - strand, within AO353_25255 at 5572.407 kb on + strand, within AO353_25255 at 5572.445 kb on - strand, within AO353_25255 at 5572.445 kb on - strand, within AO353_25255 at 5572.445 kb on - strand, within AO353_25255 at 5572.562 kb on - strand, within AO353_25255 at 5572.562 kb on - strand, within AO353_25255 at 5572.562 kb on - strand, within AO353_25255 at 5572.784 kb on - strand at 5572.882 kb on + strand, within AO353_25260 at 5572.882 kb on + strand, within AO353_25260 at 5572.882 kb on + strand, within AO353_25260 at 5572.882 kb on + strand, within AO353_25260 at 5572.882 kb on + strand, within AO353_25260 at 5572.930 kb on + strand, within AO353_25260 at 5572.930 kb on + strand, within AO353_25260 at 5572.931 kb on - strand, within AO353_25260 at 5572.931 kb on - strand, within AO353_25260 at 5573.113 kb on - strand at 5573.185 kb on + strand at 5573.185 kb on + strand at 5573.222 kb on - strand at 5573.389 kb on - strand, within AO353_25265 at 5573.633 kb on + strand, within AO353_25265 at 5573.633 kb on + strand, within AO353_25265 at 5573.633 kb on + strand, within AO353_25265 at 5573.633 kb on + strand, within AO353_25265 at 5573.634 kb on - strand, within AO353_25265
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.625 mM remove 5,571,895 + AO353_25255 0.57 -1.4 5,571,941 + AO353_25255 0.59 +1.9 5,571,942 - AO353_25255 0.59 +0.4 5,571,982 - AO353_25255 0.61 +0.4 5,572,407 + AO353_25255 0.82 -1.0 5,572,445 - AO353_25255 0.83 -1.1 5,572,445 - AO353_25255 0.83 -0.1 5,572,445 - AO353_25255 0.83 -0.4 5,572,562 - AO353_25255 0.89 +0.1 5,572,562 - AO353_25255 0.89 -0.7 5,572,562 - AO353_25255 0.89 +1.0 5,572,784 - -1.0 5,572,882 + AO353_25260 0.41 -0.7 5,572,882 + AO353_25260 0.41 -0.5 5,572,882 + AO353_25260 0.41 -1.1 5,572,882 + AO353_25260 0.41 -2.1 5,572,882 + AO353_25260 0.41 +1.5 5,572,930 + AO353_25260 0.65 +0.2 5,572,930 + AO353_25260 0.65 -1.7 5,572,931 - AO353_25260 0.66 +0.0 5,572,931 - AO353_25260 0.66 -0.4 5,573,113 - +0.7 5,573,185 + +0.6 5,573,185 + -2.6 5,573,222 - +0.2 5,573,389 - AO353_25265 0.17 +1.5 5,573,633 + AO353_25265 0.32 -0.8 5,573,633 + AO353_25265 0.32 +0.3 5,573,633 + AO353_25265 0.32 +0.2 5,573,633 + AO353_25265 0.32 +0.3 5,573,634 - AO353_25265 0.32 -0.1
Or see this region's nucleotide sequence