Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002062

Experiment: D-Sorbitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Sorbitol (C)
2,309,543	+				+0.1
2,309,543	+				-0.2
2,309,543	+				+0.3
2,309,544	-				+0.2
2,309,544	-				-0.2
2,309,625	-				-2.0
2,309,675	+				+0.6
2,309,675	+				+3.4
2,309,676	-				+0.8
2,309,676	-				-0.5
2,309,676	-				+0.8
2,309,676	-				+0.5
2,309,676	-				-0.8
2,310,494	-				+1.1
2,310,494	-				-0.9
2,310,494	-				+0.2
2,310,494	-				-0.9
2,310,500	-				+0.2
2,310,500	-				-0.2
2,310,500	-				+4.5
2,310,500	-				+1.4
2,310,500	-				+2.2
2,310,500	-				-0.6
2,310,537	-				+1.4
2,310,537	-				+0.2
2,310,537	-				+2.4
2,310,537	-				+3.0
2,310,567	-				+1.3
2,310,580	-				+0.5
2,310,580	-				-0.2
2,310,580	-				+0.8
2,310,580	-				+1.0
2,310,581	+				+3.6
2,310,582	-				+0.2
2,310,582	-				+1.1
2,310,582	-				+0.1
2,310,586	+				+0.1
2,310,586	+				+1.1
2,310,586	+				+2.5
2,310,586	+				+1.5
2,310,586	+				+2.8
2,310,586	+				+0.6
2,310,586	+				+2.2
2,310,586	+				+0.4
2,310,586	+				+3.4
2,310,587	-				+0.5
2,310,587	-				-0.3
2,310,587	-				+0.5
2,310,587	-				+0.4
2,310,587	-				+0.1
2,310,587	-				-1.0
2,310,587	-				+2.0
2,310,587	-				+0.2
2,310,587	-				-0.9
2,310,587	-				-0.2
2,310,961	-		ABIE53_002062	0.33	+0.7
2,311,059	+		ABIE53_002062	0.40	+0.4
2,311,059	+		ABIE53_002062	0.40	+1.4
2,311,060	-		ABIE53_002062	0.41	-0.2
2,311,060	-		ABIE53_002062	0.41	-0.0
2,311,060	-		ABIE53_002062	0.41	+2.1
2,311,065	+		ABIE53_002062	0.41	+0.3
2,311,065	+		ABIE53_002062	0.41	-0.4
2,311,212	+		ABIE53_002062	0.52	+0.8
2,311,213	-		ABIE53_002062	0.52	+0.5
2,311,213	-		ABIE53_002062	0.52	+0.1
2,311,213	-		ABIE53_002062	0.52	-0.2
2,311,213	-		ABIE53_002062	0.52	+1.9
2,311,445	+		ABIE53_002062	0.70	+1.8
2,311,446	-		ABIE53_002062	0.70	+0.5
2,311,446	-		ABIE53_002062	0.70	+0.4
2,311,476	+		ABIE53_002062	0.72	+0.7
2,311,476	+		ABIE53_002062	0.72	+2.0
2,311,476	+		ABIE53_002062	0.72	+0.1
2,311,476	+		ABIE53_002062	0.72	+0.2
2,311,476	+		ABIE53_002062	0.72	+1.8
2,311,477	-		ABIE53_002062	0.72	+0.7
2,311,477	-		ABIE53_002062	0.72	-0.1
2,311,477	-		ABIE53_002062	0.72	+1.4
2,311,477	-		ABIE53_002062	0.72	+0.1
2,311,477	-		ABIE53_002062	0.72	-1.8
2,311,616	+		ABIE53_002062	0.83	-1.9
2,311,616	+		ABIE53_002062	0.83	+1.4
2,311,617	-		ABIE53_002062	0.83	+2.1
2,311,680	+		ABIE53_002062	0.87	+0.4
2,311,680	+		ABIE53_002062	0.87	+1.4
2,311,680	+		ABIE53_002062	0.87	-0.6
2,311,680	+		ABIE53_002062	0.87	+0.2
2,311,680	+		ABIE53_002062	0.87	+3.5
2,311,680	+		ABIE53_002062	0.87	-0.3
2,311,680	+		ABIE53_002062	0.87	+1.4
2,311,680	+		ABIE53_002062	0.87	-0.3
2,311,680	+		ABIE53_002062	0.87	+0.2
2,311,680	+		ABIE53_002062	0.87	+3.7
2,311,680	+		ABIE53_002062	0.87	+0.1
2,311,680	+		ABIE53_002062	0.87	+1.2
2,311,680	+		ABIE53_002062	0.87	-0.2
2,311,680	+		ABIE53_002062	0.87	+0.8
2,311,680	+		ABIE53_002062	0.87	+3.5
2,311,680	+		ABIE53_002062	0.87	+0.8
2,311,680	+		ABIE53_002062	0.87	+2.8
2,311,680	+		ABIE53_002062	0.87	-1.0
2,311,681	-		ABIE53_002062	0.87	-0.3
2,311,681	-		ABIE53_002062	0.87	+2.8
2,311,681	-		ABIE53_002062	0.87	+0.4
2,311,681	-		ABIE53_002062	0.87	-0.2
2,311,681	-		ABIE53_002062	0.87	-0.6
2,311,681	-		ABIE53_002062	0.87	-0.4
2,311,681	-		ABIE53_002062	0.87	-0.4
2,311,681	-		ABIE53_002062	0.87	-1.6
2,311,681	-		ABIE53_002062	0.87	-0.7
2,311,681	-		ABIE53_002062	0.87	+0.5
2,311,681	-		ABIE53_002062	0.87	-1.2
2,311,681	-		ABIE53_002062	0.87	+0.4
2,311,681	-		ABIE53_002062	0.87	+1.6
2,311,681	-		ABIE53_002062	0.87	-2.0
2,311,681	-		ABIE53_002062	0.87	-0.5
2,311,681	-		ABIE53_002062	0.87	-0.8
2,311,681	-		ABIE53_002062	0.87	-2.1
2,311,681	-		ABIE53_002062	0.87	-0.2
2,311,683	+		ABIE53_002062	0.88	-1.3
2,311,683	+		ABIE53_002062	0.88	-0.5
2,311,683	+		ABIE53_002062	0.88	-1.3
2,311,683	+		ABIE53_002062	0.88	+0.4
2,311,683	+		ABIE53_002062	0.88	-1.5
2,311,683	+		ABIE53_002062	0.88	-1.0
2,311,683	+		ABIE53_002062	0.88	-0.2
2,311,683	+		ABIE53_002062	0.88	+0.7
2,311,683	+		ABIE53_002062	0.88	+0.1
2,311,683	+		ABIE53_002062	0.88	+0.3
2,311,683	+		ABIE53_002062	0.88	-0.8
2,311,684	-		ABIE53_002062	0.88	-0.9
2,311,684	-		ABIE53_002062	0.88	+0.4
2,311,684	-		ABIE53_002062	0.88	-0.3
2,311,684	-		ABIE53_002062	0.88	+0.5
2,311,684	-		ABIE53_002062	0.88	-1.8
2,311,684	-		ABIE53_002062	0.88	-2.5
2,311,684	-		ABIE53_002062	0.88	+1.8
2,311,684	-		ABIE53_002062	0.88	+3.9
2,311,684	-		ABIE53_002062	0.88	+0.4
2,311,684	-		ABIE53_002062	0.88	-2.0
2,311,684	-		ABIE53_002062	0.88	+0.1
2,311,684	-		ABIE53_002062	0.88	+1.2
2,311,684	-		ABIE53_002062	0.88	+1.0
2,311,713	+		ABIE53_002062	0.90	+0.6
2,311,713	+		ABIE53_002062	0.90	-1.4
2,311,713	+		ABIE53_002062	0.90	+4.2
2,311,714	-		ABIE53_002062	0.90	+1.6
2,311,758	+				-0.4
2,311,758	+				-1.0
2,311,759	-				-0.2
2,312,103	+		ABIE53_002063	0.30	-0.4
2,312,104	-		ABIE53_002063	0.30	+0.6
2,312,104	-		ABIE53_002063	0.30	+1.5
2,312,104	-		ABIE53_002063	0.30	+0.1
2,312,214	+		ABIE53_002063	0.43	-0.6
2,312,214	+		ABIE53_002063	0.43	+0.8
2,312,214	+		ABIE53_002063	0.43	+0.4
2,312,214	+		ABIE53_002063	0.43	+0.8
2,312,214	+		ABIE53_002063	0.43	-0.3
2,312,214	+		ABIE53_002063	0.43	-1.4
2,312,214	+		ABIE53_002063	0.43	+1.4
2,312,214	+		ABIE53_002063	0.43	-0.2
2,312,215	-		ABIE53_002063	0.43	-0.2
2,312,215	-		ABIE53_002063	0.43	+1.4
2,312,355	+		ABIE53_002063	0.59	+1.0
2,312,356	-		ABIE53_002063	0.59	-0.2
2,312,356	-		ABIE53_002063	0.59	-0.9
2,312,356	-		ABIE53_002063	0.59	-1.5
2,312,356	-		ABIE53_002063	0.59	-0.1
2,312,378	+		ABIE53_002063	0.62	-0.4
2,312,378	+		ABIE53_002063	0.62	-0.6
2,312,378	+		ABIE53_002063	0.62	-0.2
2,312,378	+		ABIE53_002063	0.62	-0.8
2,312,378	+		ABIE53_002063	0.62	-0.5
2,312,379	-		ABIE53_002063	0.62	-0.4
2,312,379	-		ABIE53_002063	0.62	-0.1
2,312,379	-		ABIE53_002063	0.62	+1.4
2,312,379	-		ABIE53_002063	0.62	+0.4
2,312,379	-		ABIE53_002063	0.62	-1.0
2,312,379	-		ABIE53_002063	0.62	-2.0
2,312,516	+		ABIE53_002063	0.78	+0.3
2,312,516	+		ABIE53_002063	0.78	-0.5
2,312,516	+		ABIE53_002063	0.78	-0.2
2,312,517	-		ABIE53_002063	0.78	-0.0
2,312,517	-		ABIE53_002063	0.78	+0.0
2,312,517	-		ABIE53_002063	0.78	+0.8
2,312,517	-		ABIE53_002063	0.78	-0.1
2,312,621	+				-0.8
2,312,621	+				-0.4
2,312,621	+				-0.4
2,312,621	+				+1.8
2,312,621	+				+0.6
2,312,621	+				+0.9
2,312,621	+				-0.9
2,312,621	+				-0.1
2,312,621	+				+1.4
2,312,621	+				+2.4
2,312,621	+				-0.2
2,312,621	+				+2.4
2,312,621	+				-1.0
2,312,622	-				-0.6
2,312,622	-				-2.6
2,312,622	-				-0.3
2,312,622	-				-0.0
2,312,622	-				+0.4
2,312,622	-				+2.4
2,312,622	-				+0.9
2,312,622	-				-1.5
2,312,622	-				+1.2
2,312,622	-				+2.2
2,312,622	-				+0.7
2,312,622	-				+2.6
2,312,767	+				-0.3
2,312,770	+				-1.3
2,312,770	+				-0.2
2,312,792	+				-1.5
2,312,792	+				-1.7
2,312,792	+				-1.6
2,312,803	+				+0.9
2,312,803	+				-0.5
2,312,804	-				-1.8
2,312,815	+				-0.2
2,312,815	+				+0.4
2,312,815	+				-0.1
2,312,815	+				+1.4
2,312,816	-				-0.2
2,312,816	-				+0.1
2,312,816	-				+0.4
2,312,816	-				+2.4