Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001581

Experiment: D-Sorbitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Sorbitol (C)
1,761,326	+		ABIE53_001580	0.46	-0.2
1,761,326	+		ABIE53_001580	0.46	+0.0
1,761,326	+		ABIE53_001580	0.46	+0.3
1,761,326	+		ABIE53_001580	0.46	-0.6
1,761,326	+		ABIE53_001580	0.46	-1.0
1,761,326	+		ABIE53_001580	0.46	+0.1
1,761,327	-		ABIE53_001580	0.46	+0.4
1,761,327	-		ABIE53_001580	0.46	-0.0
1,761,327	-		ABIE53_001580	0.46	-0.0
1,761,327	-		ABIE53_001580	0.46	-1.4
1,761,327	-		ABIE53_001580	0.46	-0.9
1,761,327	-		ABIE53_001580	0.46	-0.6
1,761,373	-		ABIE53_001580	0.49	-0.9
1,761,373	-		ABIE53_001580	0.49	-0.8
1,761,373	-		ABIE53_001580	0.49	+1.8
1,761,543	+		ABIE53_001580	0.60	-0.6
1,761,543	+		ABIE53_001580	0.60	-1.3
1,761,543	+		ABIE53_001580	0.60	-1.3
1,761,543	+		ABIE53_001580	0.60	+1.0
1,761,544	-		ABIE53_001580	0.60	+3.4
1,761,544	-		ABIE53_001580	0.60	+0.1
1,761,544	-		ABIE53_001580	0.60	-1.4
1,761,544	-		ABIE53_001580	0.60	-1.5
1,761,756	+		ABIE53_001580	0.74	-0.4
1,761,789	+		ABIE53_001580	0.76	-0.0
1,761,789	+		ABIE53_001580	0.76	-1.0
1,761,789	+		ABIE53_001580	0.76	+0.2
1,761,789	+		ABIE53_001580	0.76	-0.9
1,761,789	+		ABIE53_001580	0.76	-0.2
1,761,789	+		ABIE53_001580	0.76	-0.8
1,761,789	+		ABIE53_001580	0.76	-0.9
1,761,789	+		ABIE53_001580	0.76	-0.7
1,761,789	+		ABIE53_001580	0.76	-0.4
1,761,789	+		ABIE53_001580	0.76	-0.8
1,761,789	+		ABIE53_001580	0.76	+0.0
1,761,790	-		ABIE53_001580	0.76	-0.4
1,761,790	-		ABIE53_001580	0.76	-0.3
1,761,790	-		ABIE53_001580	0.76	+0.1
1,761,790	-		ABIE53_001580	0.76	-1.0
1,761,790	-		ABIE53_001580	0.76	-0.6
1,761,790	-		ABIE53_001580	0.76	-1.9
1,761,790	-		ABIE53_001580	0.76	+0.7
1,762,038	-				+1.8
1,762,038	-				-1.0
1,762,038	-				-1.2
1,762,092	+				-1.6
1,762,092	+				-0.2
1,762,092	+				-0.4
1,762,092	+				-1.9
1,762,092	+				-0.6
1,762,092	+				+1.1
1,762,092	+				-0.2
1,762,092	+				-1.2
1,762,092	+				+2.4
1,762,092	+				+0.5
1,762,092	+				-0.3
1,762,092	+				-0.4
1,762,093	-				-1.2
1,762,093	-				-1.0
1,762,093	-				+0.8
1,762,093	-				-0.0
1,762,093	-				+0.1
1,762,093	-				-1.0
1,762,093	-				-0.1
1,762,093	-				-0.5
1,762,093	-				-0.3
1,762,093	-				+0.6
1,762,093	-				+0.1
1,762,094	+				-1.2
1,762,094	+				-0.4
1,762,094	+				-0.2
1,762,094	+				+1.6
1,762,095	-				+1.8
1,762,095	-				-0.0
1,762,095	-				-1.3
1,762,180	+				+1.4
1,762,180	+				-0.5
1,762,180	+				+1.9
1,762,180	+				-0.2
1,762,180	+				-0.7
1,762,180	+				-1.0
1,762,181	-				+0.8
1,762,181	-				+0.1
1,762,184	+				-0.7
1,762,184	+				-0.6
1,762,185	-				+0.8
1,762,185	-				+0.1
1,762,185	-				-3.0
1,762,185	-				+0.1
1,762,185	-				+0.3
1,762,228	-				-0.0
1,762,273	+				-0.7
1,762,274	-				-0.2
1,762,274	-				-1.3
1,762,474	+		ABIE53_001581	0.13	-0.6
1,762,474	+		ABIE53_001581	0.13	-1.0
1,762,474	+		ABIE53_001581	0.13	-0.6
1,762,474	+		ABIE53_001581	0.13	-0.4
1,762,474	+		ABIE53_001581	0.13	+0.8
1,762,474	+		ABIE53_001581	0.13	-1.0
1,762,474	+		ABIE53_001581	0.13	-0.5
1,762,475	-		ABIE53_001581	0.13	+2.4
1,762,475	-		ABIE53_001581	0.13	-1.9
1,762,475	-		ABIE53_001581	0.13	+3.2
1,762,475	-		ABIE53_001581	0.13	+0.2
1,762,475	-		ABIE53_001581	0.13	+0.1
1,762,559	+		ABIE53_001581	0.18	+1.0
1,762,579	+		ABIE53_001581	0.20	+1.0
1,762,579	+		ABIE53_001581	0.20	+1.8
1,762,579	+		ABIE53_001581	0.20	-0.4
1,762,580	-		ABIE53_001581	0.20	-1.5
1,762,580	-		ABIE53_001581	0.20	-0.3
1,762,580	-		ABIE53_001581	0.20	-0.2
1,762,580	-		ABIE53_001581	0.20	-1.3
1,762,665	-		ABIE53_001581	0.25	+1.4
1,762,665	-		ABIE53_001581	0.25	-0.9
1,762,745	+		ABIE53_001581	0.30	+0.6
1,762,746	-		ABIE53_001581	0.30	+0.2
1,762,746	-		ABIE53_001581	0.30	+0.4
1,762,746	-		ABIE53_001581	0.30	+0.2
1,762,821	+		ABIE53_001581	0.35	-0.2
1,762,821	+		ABIE53_001581	0.35	-0.4
1,762,822	-		ABIE53_001581	0.35	+3.9
1,762,822	-		ABIE53_001581	0.35	-1.3
1,763,506	+		ABIE53_001581	0.79	-1.8
1,763,506	+		ABIE53_001581	0.79	+0.7
1,763,506	+		ABIE53_001581	0.79	+0.4
1,763,506	+		ABIE53_001581	0.79	-2.1
1,763,506	+		ABIE53_001581	0.79	-1.5
1,763,506	+		ABIE53_001581	0.79	+1.0
1,763,506	+		ABIE53_001581	0.79	-0.2
1,763,506	+		ABIE53_001581	0.79	+2.8
1,763,506	+		ABIE53_001581	0.79	+0.2
1,763,506	+		ABIE53_001581	0.79	+0.8
1,763,507	-		ABIE53_001581	0.79	+0.1
1,763,507	-		ABIE53_001581	0.79	-1.3
1,763,507	-		ABIE53_001581	0.79	-0.2
1,763,507	-		ABIE53_001581	0.79	+1.2
1,763,507	-		ABIE53_001581	0.79	+1.7
1,763,507	-		ABIE53_001581	0.79	-0.3
1,763,507	-		ABIE53_001581	0.79	+3.4
1,763,507	-		ABIE53_001581	0.79	-1.1
1,763,507	-		ABIE53_001581	0.79	-0.4
1,763,507	-		ABIE53_001581	0.79	+2.4
1,763,760	+				+1.4
1,763,761	-				-0.4
1,763,824	+				+1.4
1,763,824	+				+1.4
1,763,824	+				-0.2
1,763,825	-				-1.8
1,763,857	+				-1.4
1,763,857	+				-1.2
1,763,857	+				-1.8
1,763,857	+				+0.7
1,763,857	+				-0.1
1,763,857	+				-0.2
1,763,857	+				-0.8
1,763,857	+				+1.1
1,763,858	-				+1.8
1,763,858	-				-1.4
1,763,858	-				-0.2
1,763,858	-				-1.0
1,763,858	-				-2.5
1,763,871	+				+0.2
1,763,871	+				-0.9
1,763,871	+				+1.4
1,763,872	-				+1.1
1,763,872	-				-0.3
1,763,872	-				+1.8
1,763,947	-				-0.7
1,763,997	+				-0.9
1,763,998	-				-0.2
1,764,285	+		ABIE53_001582	0.53	-0.0
1,764,285	+		ABIE53_001582	0.53	-0.9
1,764,333	+		ABIE53_001582	0.61	-0.6
1,764,333	+		ABIE53_001582	0.61	-0.6
1,764,334	-		ABIE53_001582	0.61	-0.6
1,764,386	-		ABIE53_001582	0.69	-1.0
1,764,386	-		ABIE53_001582	0.69	-0.4
1,764,386	-		ABIE53_001582	0.69	-1.3
1,764,568	+				+0.9
1,764,568	+				-1.5
1,764,568	+				+0.6
1,764,569	-				+0.8
1,764,686	+				-0.4
1,764,686	+				-0.3
1,764,687	-				-0.8
1,764,701	-				+0.2
1,764,711	+				+0.1
1,764,730	+				-0.4
1,764,752	+				-0.5
1,764,752	+				+2.7
1,764,800	+				+0.7
1,764,820	+				-1.0
1,764,820	+				-0.2
1,764,820	+				-0.3
1,764,821	-				-0.4
1,764,821	-				+0.8