Strain Fitness in Pantoea sp. MT58 around IAI47_21370

Experiment: Nickel (II) chloride 20 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 20 uM, anaerobic
7,191	+		IAI47_21360	0.17	+1.2
7,191	+		IAI47_21360	0.17	+1.0
7,192	-		IAI47_21360	0.17	+0.3
7,257	+		IAI47_21360	0.45	+1.7
7,258	-		IAI47_21360	0.45	+0.3
7,304	+		IAI47_21360	0.64	-0.6
7,304	+		IAI47_21360	0.64	-0.1
7,304	+		IAI47_21360	0.64	-1.4
7,304	+		IAI47_21360	0.64	+0.6
7,305	-		IAI47_21360	0.65	+1.6
7,305	-		IAI47_21360	0.65	-0.6
7,305	-		IAI47_21360	0.65	+1.9
7,305	-		IAI47_21360	0.65	+1.1
7,307	+		IAI47_21360	0.65	-1.1
7,307	+		IAI47_21360	0.65	+0.6
7,307	+		IAI47_21360	0.65	-0.3
7,308	-		IAI47_21360	0.66	+0.9
7,308	-		IAI47_21360	0.66	+1.1
7,322	-		IAI47_21360	0.72	+1.0
7,331	+		IAI47_21360	0.75	+0.6
7,331	+		IAI47_21360	0.75	-0.8
7,331	+		IAI47_21360	0.75	-0.2
7,331	+		IAI47_21360	0.75	+0.2
7,331	+		IAI47_21360	0.75	+2.2
7,331	+		IAI47_21360	0.75	-0.8
7,332	-		IAI47_21360	0.76	-0.9
7,332	-		IAI47_21360	0.76	+0.6
7,334	+		IAI47_21360	0.77	+0.6
7,334	+		IAI47_21360	0.77	+1.4
7,335	-		IAI47_21360	0.77	-0.6
7,335	-		IAI47_21360	0.77	+1.1
7,335	-		IAI47_21360	0.77	+1.0
7,335	-		IAI47_21360	0.77	-0.1
7,335	-		IAI47_21360	0.77	+0.6
7,337	+		IAI47_21360	0.78	+0.3
7,337	+		IAI47_21360	0.78	+1.9
7,338	-		IAI47_21360	0.78	+0.7
7,381	-				-0.7
7,381	-				-0.3
7,381	-				+2.3
7,408	+				+0.6
7,409	-				+3.2
7,409	-				+0.2
7,414	+				-0.3
7,415	-				+2.2
7,426	+				-0.4
7,426	+				+0.4
7,436	+				+0.1
7,436	+				+0.6
7,437	-				-1.1
7,437	-				+0.5
7,437	-				+0.9
7,441	+				-1.0
7,441	+				+0.1
7,441	+				+0.2
7,442	-				+0.8
7,442	-				-0.4
7,442	-				-1.0
7,490	+				+0.2
7,490	+				-1.2
7,490	+				-0.9
7,490	+				+0.7
7,490	+				+2.0
7,491	-				+0.9
7,494	+				+1.6
7,494	+				+0.6
7,495	-				-1.1
7,495	-				+2.2
7,558	+				-0.7
7,558	+				+1.6
7,564	+				-0.3
7,564	+				+2.9
7,564	+				+2.2
7,564	+				-0.2
7,564	+				+0.1
7,565	-				-0.2
7,565	-				-0.7
7,565	-				-1.8
7,565	-				+2.2
7,572	+				+1.1
7,572	+				+0.5
7,572	+				+3.2
7,573	-				-0.8
7,628	-		IAI47_21365	0.13	+2.2
7,639	+		IAI47_21365	0.15	+1.6
7,639	+		IAI47_21365	0.15	-0.8
7,639	+		IAI47_21365	0.15	-0.3
7,640	-		IAI47_21365	0.15	-0.4
7,640	-		IAI47_21365	0.15	+1.2
7,640	-		IAI47_21365	0.15	+0.3
7,640	-		IAI47_21365	0.15	+1.3
7,640	-		IAI47_21365	0.15	-0.4
7,640	-		IAI47_21365	0.15	+1.6
7,648	+		IAI47_21365	0.17	-0.3
7,648	+		IAI47_21365	0.17	+0.9
7,657	+		IAI47_21365	0.19	+0.9
7,658	-		IAI47_21365	0.19	+0.6
7,675	-		IAI47_21365	0.22	-1.1
7,691	+		IAI47_21365	0.26	+1.2
7,691	+		IAI47_21365	0.26	+0.8
7,691	+		IAI47_21365	0.26	-0.7
7,691	+		IAI47_21365	0.26	-0.7
7,692	-		IAI47_21365	0.26	+1.5
7,699	+		IAI47_21365	0.27	+1.8
7,699	+		IAI47_21365	0.27	+0.4
7,699	+		IAI47_21365	0.27	-0.0
7,699	+		IAI47_21365	0.27	-0.1
7,699	+		IAI47_21365	0.27	+1.5
7,700	-		IAI47_21365	0.28	-0.4
7,700	-		IAI47_21365	0.28	+1.4
7,700	-		IAI47_21365	0.28	-0.4
7,700	-		IAI47_21365	0.28	+0.2
7,721	+		IAI47_21365	0.32	+1.2
7,776	+		IAI47_21365	0.43	+0.2
7,776	+		IAI47_21365	0.43	-0.4
7,777	-		IAI47_21365	0.43	+0.0
7,777	-		IAI47_21365	0.43	+0.2
7,922	-		IAI47_21365	0.73	-0.5
7,922	-		IAI47_21365	0.73	+0.4
7,922	-		IAI47_21365	0.73	+0.0
7,922	-		IAI47_21365	0.73	-0.3
7,923	+		IAI47_21365	0.73	+1.6
7,923	+		IAI47_21365	0.73	-1.0
7,923	+		IAI47_21365	0.73	+0.8
7,923	+		IAI47_21365	0.73	+0.6
7,923	+		IAI47_21365	0.73	+1.6
7,923	+		IAI47_21365	0.73	-0.8
7,923	+		IAI47_21365	0.73	+2.5
7,923	+		IAI47_21365	0.73	+2.3
7,923	+		IAI47_21365	0.73	+1.2
7,924	-		IAI47_21365	0.73	-0.4
7,924	-		IAI47_21365	0.73	-1.3
7,924	-		IAI47_21365	0.73	-1.2
7,924	-		IAI47_21365	0.73	-1.0
7,924	-		IAI47_21365	0.73	-1.0
7,924	-		IAI47_21365	0.73	+0.2
7,983	+		IAI47_21365	0.85	-1.7
7,983	+		IAI47_21365	0.85	+0.9
7,984	-		IAI47_21365	0.86	+1.0
8,008	+				+2.2
8,009	-				-0.1
8,035	+				-0.4
8,035	+				-0.3
8,035	+				-0.5
8,051	+				+0.1
8,051	+				+0.5
8,051	+				+1.0
8,051	+				-0.0
8,052	-				-1.0
8,052	-				+0.1
8,052	-				+0.9
8,052	-				+1.0
8,052	-				+1.1
8,054	+				+0.2
8,055	-				+1.1
8,055	-				+1.6
8,055	-				+3.8
8,094	+				+0.3
8,094	+				+0.2
8,094	+				+2.2
8,142	+				-0.2
8,142	+				+0.6
8,143	-				+0.1
8,143	-				-1.3
8,143	-				+1.2
8,143	-				+0.0
8,148	+				+0.6
8,148	+				+0.9
8,149	-				+1.4
8,149	-				+0.2
8,149	-				+2.0
8,149	-				+1.5
8,172	+				-0.3
8,217	+		IAI47_21370	0.12	-0.7
8,218	-		IAI47_21370	0.12	-0.5
8,218	-		IAI47_21370	0.12	+1.2
8,218	-		IAI47_21370	0.12	-0.3
8,218	-		IAI47_21370	0.12	+0.1
8,241	+		IAI47_21370	0.15	-1.0
8,242	-		IAI47_21370	0.15	-0.4
8,242	-		IAI47_21370	0.15	-0.4
8,346	+		IAI47_21370	0.29	+0.6
8,347	-		IAI47_21370	0.29	-0.7
8,347	-		IAI47_21370	0.29	+0.0
8,386	-		IAI47_21370	0.34	-0.1
8,546	+		IAI47_21370	0.55	-0.4
8,547	-		IAI47_21370	0.55	-0.3
8,554	-		IAI47_21370	0.56	-0.9
8,554	-		IAI47_21370	0.56	+2.8
8,558	+		IAI47_21370	0.57	+1.8
8,558	+		IAI47_21370	0.57	+1.2
8,559	-		IAI47_21370	0.57	-0.3
8,559	-		IAI47_21370	0.57	+1.0
8,559	-		IAI47_21370	0.57	+1.4
8,559	-		IAI47_21370	0.57	-0.1
8,574	-		IAI47_21370	0.59	-0.7
8,574	-		IAI47_21370	0.59	-1.3
8,608	-		IAI47_21370	0.63	-0.1
8,643	+		IAI47_21370	0.68	+0.9
8,644	-		IAI47_21370	0.68	+0.4
8,644	-		IAI47_21370	0.68	+1.2
8,644	-		IAI47_21370	0.68	-0.6
8,644	-		IAI47_21370	0.68	-0.3
8,694	+		IAI47_21370	0.74	-0.1
8,694	+		IAI47_21370	0.74	-0.8
8,694	+		IAI47_21370	0.74	+0.3
8,694	+		IAI47_21370	0.74	+0.9
8,695	-		IAI47_21370	0.75	+0.4
8,695	-		IAI47_21370	0.75	+1.1
8,695	-		IAI47_21370	0.75	+1.5
8,695	-		IAI47_21370	0.75	-0.5
8,704	-		IAI47_21370	0.76	+0.9
8,721	+		IAI47_21370	0.78	+1.1
8,721	+		IAI47_21370	0.78	+1.1
8,721	+		IAI47_21370	0.78	-1.3
8,721	+		IAI47_21370	0.78	+1.6
8,721	+		IAI47_21370	0.78	-1.2
8,721	+		IAI47_21370	0.78	+0.6
8,721	+		IAI47_21370	0.78	+1.1
8,721	+		IAI47_21370	0.78	+0.6
8,721	+		IAI47_21370	0.78	-0.7
8,721	+		IAI47_21370	0.78	-0.9
8,722	-		IAI47_21370	0.78	+1.3
8,722	-		IAI47_21370	0.78	+1.8
8,722	-		IAI47_21370	0.78	-1.4
8,722	-		IAI47_21370	0.78	-1.8
8,722	-		IAI47_21370	0.78	-0.2
8,722	-		IAI47_21370	0.78	+0.2
8,722	-		IAI47_21370	0.78	-0.6
8,722	-		IAI47_21370	0.78	+1.1
8,752	+		IAI47_21370	0.82	-1.1
8,752	+		IAI47_21370	0.82	+0.0
8,752	+		IAI47_21370	0.82	-0.4
8,752	+		IAI47_21370	0.82	+0.0
8,753	-		IAI47_21370	0.82	-1.0
8,753	-		IAI47_21370	0.82	+1.0
8,753	-		IAI47_21370	0.82	-0.1
8,772	+		IAI47_21370	0.85	-1.4
8,772	+		IAI47_21370	0.85	-0.8
8,772	+		IAI47_21370	0.85	+0.0
8,773	-		IAI47_21370	0.85	+2.6
8,773	-		IAI47_21370	0.85	-1.0
8,773	-		IAI47_21370	0.85	+4.2
8,773	-		IAI47_21370	0.85	+1.2
8,781	-		IAI47_21370	0.86	-0.1
8,807	-		IAI47_21370	0.89	+0.2
8,863	+				+2.0
8,863	+				+1.1
8,863	+				+0.7
8,863	+				+1.3
8,863	+				+1.7
8,863	+				-0.3
8,863	+				+1.5
8,863	+				+0.7
8,863	+				-1.0
8,863	+				+1.9
8,864	-				-1.0
8,864	-				+2.2
8,864	-				+1.6
8,864	-				+1.4
8,864	-				+0.2
8,864	-				+2.4
8,864	-				-0.8
8,864	-				+2.6
8,864	-				+1.7
8,874	+				-1.1
8,875	-				+0.3
8,889	+				-0.4
8,889	+				+0.5
8,889	+				+0.9
8,889	+				+1.0
8,889	+				-0.9
8,889	+				+0.2
8,889	+				+2.2
8,889	+				+0.9
8,889	+				-0.1
8,889	+				-0.9
8,889	+				+0.4
8,889	+				-0.3
8,889	+				-0.1
8,889	+				+1.7
8,889	+				+0.2
8,890	-				+1.1
8,890	-				+0.1
8,890	-				-0.1
8,890	-				+1.8
8,890	-				-0.0
8,890	-				+0.3
8,890	-				+1.7
8,890	-				+1.6
8,890	-				-0.5
8,890	-				-0.0
8,890	-				+0.2
8,893	+				+0.0
8,893	+				+0.2
8,893	+				-0.0
8,893	+				+2.2
8,893	+				+0.0
8,893	+				-2.3
8,893	+				-0.6
8,893	+				-1.0
8,893	+				-0.6
8,893	+				-0.8
8,893	+				-0.6
8,893	+				+0.6
8,893	+				+0.2
8,893	+				-0.5
8,894	-				+0.9
8,894	-				+1.2
8,894	-				-0.1
8,894	-				+0.7
8,894	-				+1.9
8,894	-				-2.5
8,894	-				+2.6
8,894	-				+1.2
8,897	-				+2.7
8,943	-				-1.0
8,943	-				+0.3
8,943	-				+0.0
8,970	-				-0.1
9,014	-				-1.6
9,014	-				+1.2
9,026	+				+0.6
9,026	+				+0.6
9,064	+				+0.5
9,065	-				-0.5
9,098	+				+0.4
9,098	+				-0.5
9,098	+				+1.6
9,098	+				+1.2
9,098	+				-0.3
9,098	+				+0.6
9,099	-				+0.7
9,099	-				+1.8
9,099	-				+0.9
9,099	-				+0.4
9,099	-				+2.2
9,099	-				-0.5
9,099	-				+0.9
9,099	-				+0.9
9,099	-				+1.5
9,102	+				-0.3
9,102	+				-0.1
9,102	+				+0.0
9,103	-				-0.3
9,103	-				+1.4
9,103	-				+2.1
9,152	+		IAI47_21375	0.30	-0.4
9,152	+		IAI47_21375	0.30	+1.6
9,158	+		IAI47_21375	0.33	-0.6
9,158	+		IAI47_21375	0.33	+1.5
9,159	-		IAI47_21375	0.34	-0.1
9,159	-		IAI47_21375	0.34	+0.3
9,174	+		IAI47_21375	0.41	-0.3
9,213	+		IAI47_21375	0.60	+1.2
9,213	+		IAI47_21375	0.60	-0.4
9,213	+		IAI47_21375	0.60	+1.5
9,213	+		IAI47_21375	0.60	+0.4
9,213	+		IAI47_21375	0.60	+0.4
9,214	-		IAI47_21375	0.60	+0.5
9,214	-		IAI47_21375	0.60	-0.3
9,214	-		IAI47_21375	0.60	-0.3
9,214	-		IAI47_21375	0.60	+0.4
9,225	+		IAI47_21375	0.65	+0.2
9,225	+		IAI47_21375	0.65	+1.2
9,225	+		IAI47_21375	0.65	+0.3
9,225	+		IAI47_21375	0.65	-1.6
9,252	+		IAI47_21375	0.78	-0.8
9,252	+		IAI47_21375	0.78	+0.0
9,252	+		IAI47_21375	0.78	-0.9
9,252	+		IAI47_21375	0.78	+1.2
9,252	+		IAI47_21375	0.78	+0.2
9,252	+		IAI47_21375	0.78	+0.2
9,253	-		IAI47_21375	0.79	+0.8
9,253	-		IAI47_21375	0.79	-0.7
9,253	-		IAI47_21375	0.79	+0.6
9,253	-		IAI47_21375	0.79	-0.7
9,253	-		IAI47_21375	0.79	+0.4
9,253	-		IAI47_21375	0.79	+0.0
9,273	+		IAI47_21375	0.88	-0.8
9,322	+				-0.6
9,322	+				-0.8
9,323	-				+0.1
9,341	+				+0.9
9,341	+				+1.2
9,341	+				+0.6
9,341	+				+0.8
9,341	+				+1.9
9,341	+				+0.3
9,342	-				+1.2
9,342	-				+0.7
9,342	-				-0.4
9,342	-				-0.4
9,342	-				+0.7
9,342	-				+0.2
9,342	-				+2.4
9,342	-				-0.5
9,342	-				+1.3
9,342	-				-0.8
9,372	+				-0.3
9,372	+				+1.0
9,373	-				+0.2
9,373	-				+0.0
9,448	+				+1.0
9,448	+				+1.4
9,449	-				-1.0
9,449	-				+1.9
9,469	+				+0.3
9,469	+				+1.1
9,469	+				+2.0
9,499	+				-0.9
9,499	+				-1.0
9,499	+				+0.7
9,499	+				+0.0
9,500	-				-1.1
9,548	+				-1.3
9,548	+				+1.0
9,549	-				-1.0
9,549	-				+0.2
9,549	-				-0.9
9,551	+				+2.5
9,552	-				-0.0
9,598	+		IAI47_21380	0.10	-1.3
9,599	-		IAI47_21380	0.10	-0.1
9,643	-		IAI47_21380	0.14	-0.5
9,643	-		IAI47_21380	0.14	+0.9
9,643	-		IAI47_21380	0.14	+2.0
9,643	-		IAI47_21380	0.14	+2.5
9,643	-		IAI47_21380	0.14	+0.4
9,655	+		IAI47_21380	0.15	-0.0
9,655	+		IAI47_21380	0.15	+1.8
9,655	+		IAI47_21380	0.15	+1.0
9,656	-		IAI47_21380	0.15	+1.7
9,656	-		IAI47_21380	0.15	+1.2
9,656	-		IAI47_21380	0.15	-1.8
9,656	-		IAI47_21380	0.15	+1.6
9,658	+		IAI47_21380	0.15	-1.2
9,659	-		IAI47_21380	0.15	+1.6
9,659	-		IAI47_21380	0.15	+0.6
9,659	-		IAI47_21380	0.15	+0.7
9,715	-		IAI47_21380	0.20	+0.0
9,804	+		IAI47_21380	0.27	+2.2
9,805	-		IAI47_21380	0.27	-0.5
9,814	+		IAI47_21380	0.28	+0.4
9,814	+		IAI47_21380	0.28	+2.5
9,814	+		IAI47_21380	0.28	+0.2