Strain Fitness in Pantoea sp. MT58 around IAI47_11450

Experiment: Nickel (II) chloride 20 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 20 uM, anaerobic
2,422,299	-		IAI47_11445	0.66	-1.3
2,422,322	-		IAI47_11445	0.70	+0.7
2,422,344	+		IAI47_11445	0.73	-1.2
2,422,344	+		IAI47_11445	0.73	-1.4
2,422,348	-		IAI47_11445	0.73	+2.0
2,422,348	-		IAI47_11445	0.73	+0.0
2,422,381	+		IAI47_11445	0.78	-1.1
2,422,382	-		IAI47_11445	0.78	+0.4
2,422,452	-		IAI47_11445	0.88	-1.4
2,422,559	-				+0.6
2,422,604	-				+2.8
2,422,752	-				+0.5
2,422,753	+				-1.3
2,422,753	+				+0.8
2,422,754	-				+0.1
2,422,768	-				-1.4
2,422,802	-				-0.8
2,422,805	+				+0.1
2,422,806	-				-0.3
2,422,824	-				-1.0
2,423,015	+				-0.8
2,423,026	+				-0.5
2,423,027	-				-0.0
2,423,027	-				-0.8
2,423,114	+				+0.0
2,423,156	-				-0.4
2,423,222	-				+1.6
2,423,259	-				+0.9
2,423,284	-				+0.7
2,423,314	+				+0.6
2,423,359	+		IAI47_11450	0.10	-1.0
2,423,426	-		IAI47_11450	0.19	-2.5
2,423,447	+		IAI47_11450	0.22	-0.8
2,423,461	+		IAI47_11450	0.24	-2.3
2,423,465	+		IAI47_11450	0.24	-1.0
2,423,465	+		IAI47_11450	0.24	-0.7
2,423,465	+		IAI47_11450	0.24	+1.6
2,423,465	+		IAI47_11450	0.24	-2.1
2,423,491	+		IAI47_11450	0.28	-2.7
2,423,492	-		IAI47_11450	0.28	+0.2
2,423,492	-		IAI47_11450	0.28	-1.5
2,423,525	-		IAI47_11450	0.33	+0.7
2,423,543	+		IAI47_11450	0.35	-1.8
2,423,564	+		IAI47_11450	0.38	-1.7
2,423,565	-		IAI47_11450	0.38	-2.1
2,423,569	+		IAI47_11450	0.38	-2.1
2,423,570	-		IAI47_11450	0.39	+0.2
2,423,614	+		IAI47_11450	0.44	+0.9
2,423,614	+		IAI47_11450	0.44	-0.3
2,423,642	+		IAI47_11450	0.48	+0.0
2,423,682	-		IAI47_11450	0.54	-0.8
2,423,701	+		IAI47_11450	0.56	-0.3
2,423,701	+		IAI47_11450	0.56	+0.7
2,423,824	+		IAI47_11450	0.73	+0.8
2,423,824	+		IAI47_11450	0.73	-0.3
2,423,825	-		IAI47_11450	0.73	+0.0
2,423,837	-		IAI47_11450	0.74	-2.8
2,423,855	+		IAI47_11450	0.77	-1.2
2,423,855	+		IAI47_11450	0.77	-0.5
2,423,855	+		IAI47_11450	0.77	+0.0
2,423,914	+		IAI47_11450	0.85	-1.3
2,423,941	-		IAI47_11450	0.88	-1.7
2,423,941	-		IAI47_11450	0.88	-0.6
2,423,945	-		IAI47_11450	0.89	-0.1
2,423,945	-		IAI47_11450	0.89	+0.5
2,423,956	+				-0.6
2,423,957	-				-2.6
2,423,957	-				-2.4
2,423,976	-				+0.5
2,424,051	-				+0.2
2,424,086	-				-0.9
2,424,086	-				+0.7
2,424,096	-				+0.6
2,424,115	+				+0.2
2,424,116	-				-0.1
2,424,145	+				-0.6
2,424,145	+				-1.2
2,424,145	+				+0.1
2,424,145	+				-1.3
2,424,145	+				-1.6
2,424,145	+				-0.3
2,424,146	-				+1.0
2,424,146	-				+0.8
2,424,146	-				+1.3
2,424,146	-				-0.7
2,424,146	-				+0.6
2,424,146	-				-0.1
2,424,146	-				-0.4
2,424,180	-		IAI47_11455	0.11	+0.4
2,424,245	-		IAI47_11455	0.16	+0.3
2,424,245	-		IAI47_11455	0.16	-0.4
2,424,251	+		IAI47_11455	0.16	-1.2
2,424,252	-		IAI47_11455	0.16	-2.7
2,424,296	+		IAI47_11455	0.20	-1.5
2,424,297	-		IAI47_11455	0.20	+0.5
2,424,301	+		IAI47_11455	0.20	-1.7
2,424,301	+		IAI47_11455	0.20	+1.3
2,424,301	+		IAI47_11455	0.20	-0.7
2,424,301	+		IAI47_11455	0.20	+0.3
2,424,301	+		IAI47_11455	0.20	-0.1
2,424,301	+		IAI47_11455	0.20	+0.8
2,424,302	-		IAI47_11455	0.20	-1.2
2,424,302	-		IAI47_11455	0.20	+0.0
2,424,302	-		IAI47_11455	0.20	+0.1
2,424,302	-		IAI47_11455	0.20	+1.5
2,424,305	-		IAI47_11455	0.21	+0.4
2,424,305	-		IAI47_11455	0.21	-0.7
2,424,327	+		IAI47_11455	0.22	+1.3
2,424,337	+		IAI47_11455	0.23	+0.9
2,424,338	-		IAI47_11455	0.23	-0.3
2,424,338	-		IAI47_11455	0.23	+0.6
2,424,362	+		IAI47_11455	0.25	+1.0
2,424,375	+		IAI47_11455	0.26	+0.0
2,424,487	+		IAI47_11455	0.35	-1.0
2,424,525	-		IAI47_11455	0.37	+0.5
2,424,525	-		IAI47_11455	0.37	-1.7
2,424,557	+		IAI47_11455	0.40	+0.9
2,424,558	-		IAI47_11455	0.40	-0.2
2,424,558	-		IAI47_11455	0.40	+0.8
2,424,614	-		IAI47_11455	0.44	-0.3
2,424,640	+		IAI47_11455	0.46	-0.8
2,424,640	+		IAI47_11455	0.46	+1.3
2,424,641	-		IAI47_11455	0.46	-0.9
2,424,641	-		IAI47_11455	0.46	+0.6
2,424,641	-		IAI47_11455	0.46	-1.0
2,424,672	+		IAI47_11455	0.49	+0.6
2,424,672	+		IAI47_11455	0.49	+1.3
2,424,672	+		IAI47_11455	0.49	-0.9
2,424,672	+		IAI47_11455	0.49	-1.0
2,424,672	+		IAI47_11455	0.49	+0.8
2,424,672	+		IAI47_11455	0.49	+0.0
2,424,673	-		IAI47_11455	0.49	-0.3
2,424,673	-		IAI47_11455	0.49	+0.0
2,424,674	+		IAI47_11455	0.49	+0.7
2,424,674	+		IAI47_11455	0.49	-0.3
2,424,674	+		IAI47_11455	0.49	-1.0
2,424,674	+		IAI47_11455	0.49	+1.7
2,424,674	+		IAI47_11455	0.49	+0.8
2,424,675	-		IAI47_11455	0.49	-0.6
2,424,675	-		IAI47_11455	0.49	-1.3
2,424,675	-		IAI47_11455	0.49	+0.2
2,424,675	-		IAI47_11455	0.49	+0.1
2,424,675	-		IAI47_11455	0.49	+0.4
2,424,710	+		IAI47_11455	0.52	-0.3
2,424,711	-		IAI47_11455	0.52	-0.0
2,424,724	+		IAI47_11455	0.53	-0.4
2,424,724	+		IAI47_11455	0.53	+2.2
2,424,731	-		IAI47_11455	0.53	-0.7
2,424,731	-		IAI47_11455	0.53	+0.3
2,424,732	+		IAI47_11455	0.53	-0.9
2,424,732	+		IAI47_11455	0.53	+0.9
2,424,733	-		IAI47_11455	0.54	+0.8
2,424,764	-		IAI47_11455	0.56	+0.2
2,424,783	-		IAI47_11455	0.57	+1.6
2,424,793	+		IAI47_11455	0.58	-1.3
2,424,793	+		IAI47_11455	0.58	-2.0
2,424,793	+		IAI47_11455	0.58	-0.7
2,424,793	+		IAI47_11455	0.58	+1.0
2,424,794	-		IAI47_11455	0.58	-2.0
2,424,794	-		IAI47_11455	0.58	+1.1
2,424,819	+		IAI47_11455	0.60	-0.2
2,424,825	+		IAI47_11455	0.61	+0.2
2,424,825	+		IAI47_11455	0.61	+0.2
2,424,825	+		IAI47_11455	0.61	+0.4
2,424,825	+		IAI47_11455	0.61	-0.1
2,424,825	+		IAI47_11455	0.61	+0.8
2,424,825	+		IAI47_11455	0.61	+0.2
2,424,826	-		IAI47_11455	0.61	-0.6
2,424,826	-		IAI47_11455	0.61	+0.8
2,424,826	-		IAI47_11455	0.61	-1.2
2,424,826	-		IAI47_11455	0.61	+0.1
2,424,826	-		IAI47_11455	0.61	-0.4
2,424,826	-		IAI47_11455	0.61	+0.4
2,424,826	-		IAI47_11455	0.61	+0.1
2,424,857	-		IAI47_11455	0.63	+0.3
2,424,857	-		IAI47_11455	0.63	-0.6
2,424,860	-		IAI47_11455	0.63	+0.1
2,424,895	+		IAI47_11455	0.66	-0.9
2,424,896	-		IAI47_11455	0.66	-0.9
2,424,905	-		IAI47_11455	0.67	-0.5
2,424,924	-		IAI47_11455	0.68	+0.3
2,425,026	-		IAI47_11455	0.76	-2.6