Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_01948 and CCNA_01949 overlap by 20 nucleotides CCNA_01949 and CCNA_01950 are separated by 77 nucleotides
CCNA_01948: CCNA_01948 - peptidoglycan-specific endopeptidase, M23 family, at 2,090,363 to 2,091,514
_01948
CCNA_01949: CCNA_01949 - bactofilin A BacA, at 2,091,495 to 2,091,980
_01949
CCNA_01950: CCNA_01950 - peptide chain Release factor 2 (RF-2), at 2,092,058 to 2,093,173
_01950
Position (kb)
2091
2092 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2090.526 kb on - strand, within CCNA_01948 at 2090.526 kb on - strand, within CCNA_01948 at 2090.612 kb on + strand, within CCNA_01948 at 2090.627 kb on + strand, within CCNA_01948 at 2090.635 kb on - strand, within CCNA_01948 at 2090.636 kb on + strand, within CCNA_01948 at 2090.636 kb on + strand, within CCNA_01948 at 2090.636 kb on + strand, within CCNA_01948 at 2090.640 kb on - strand, within CCNA_01948 at 2090.644 kb on - strand, within CCNA_01948 at 2090.644 kb on - strand, within CCNA_01948 at 2090.644 kb on - strand, within CCNA_01948 at 2090.727 kb on + strand, within CCNA_01948 at 2090.727 kb on + strand, within CCNA_01948 at 2090.735 kb on - strand, within CCNA_01948 at 2090.737 kb on - strand, within CCNA_01948 at 2090.840 kb on + strand, within CCNA_01948 at 2090.848 kb on - strand, within CCNA_01948 at 2090.849 kb on + strand, within CCNA_01948 at 2090.864 kb on + strand, within CCNA_01948 at 2090.864 kb on + strand, within CCNA_01948 at 2090.864 kb on + strand, within CCNA_01948 at 2090.872 kb on - strand, within CCNA_01948 at 2090.872 kb on - strand, within CCNA_01948 at 2090.921 kb on + strand, within CCNA_01948 at 2090.986 kb on + strand, within CCNA_01948 at 2091.016 kb on - strand, within CCNA_01948 at 2091.016 kb on - strand, within CCNA_01948 at 2091.028 kb on - strand, within CCNA_01948 at 2091.164 kb on - strand, within CCNA_01948 at 2091.194 kb on + strand, within CCNA_01948 at 2091.234 kb on - strand, within CCNA_01948 at 2091.248 kb on - strand, within CCNA_01948 at 2091.253 kb on - strand, within CCNA_01948 at 2091.281 kb on + strand, within CCNA_01948 at 2091.393 kb on + strand, within CCNA_01948 at 2091.443 kb on - strand at 2091.448 kb on - strand at 2091.451 kb on + strand at 2091.458 kb on + strand at 2091.458 kb on + strand at 2091.466 kb on - strand at 2091.535 kb on - strand at 2091.565 kb on - strand, within CCNA_01949 at 2091.597 kb on + strand, within CCNA_01949 at 2091.599 kb on + strand, within CCNA_01949 at 2091.599 kb on + strand, within CCNA_01949 at 2091.617 kb on + strand, within CCNA_01949 at 2091.796 kb on + strand, within CCNA_01949 at 2091.806 kb on + strand, within CCNA_01949 at 2091.942 kb on + strand at 2091.975 kb on + strand at 2092.082 kb on + strand at 2092.090 kb on - strand at 2092.090 kb on - strand at 2092.097 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 2,090,526 - CCNA_01948 0.14 -0.5 2,090,526 - CCNA_01948 0.14 +1.4 2,090,612 + CCNA_01948 0.22 -0.3 2,090,627 + CCNA_01948 0.23 +0.6 2,090,635 - CCNA_01948 0.24 -0.7 2,090,636 + CCNA_01948 0.24 +2.6 2,090,636 + CCNA_01948 0.24 +1.4 2,090,636 + CCNA_01948 0.24 +1.5 2,090,640 - CCNA_01948 0.24 +1.0 2,090,644 - CCNA_01948 0.24 -0.1 2,090,644 - CCNA_01948 0.24 -0.3 2,090,644 - CCNA_01948 0.24 -1.3 2,090,727 + CCNA_01948 0.32 +1.1 2,090,727 + CCNA_01948 0.32 +1.2 2,090,735 - CCNA_01948 0.32 +0.1 2,090,737 - CCNA_01948 0.32 +0.6 2,090,840 + CCNA_01948 0.41 +1.0 2,090,848 - CCNA_01948 0.42 -1.4 2,090,849 + CCNA_01948 0.42 +0.1 2,090,864 + CCNA_01948 0.43 +1.4 2,090,864 + CCNA_01948 0.43 +1.5 2,090,864 + CCNA_01948 0.43 +3.2 2,090,872 - CCNA_01948 0.44 -1.9 2,090,872 - CCNA_01948 0.44 -0.5 2,090,921 + CCNA_01948 0.48 +1.5 2,090,986 + CCNA_01948 0.54 +1.0 2,091,016 - CCNA_01948 0.57 -0.8 2,091,016 - CCNA_01948 0.57 +0.7 2,091,028 - CCNA_01948 0.58 +0.5 2,091,164 - CCNA_01948 0.70 -1.2 2,091,194 + CCNA_01948 0.72 +1.3 2,091,234 - CCNA_01948 0.76 -0.4 2,091,248 - CCNA_01948 0.77 -0.5 2,091,253 - CCNA_01948 0.77 -0.6 2,091,281 + CCNA_01948 0.80 +2.5 2,091,393 + CCNA_01948 0.89 +0.9 2,091,443 - +0.4 2,091,448 - +0.0 2,091,451 + +1.2 2,091,458 + +1.3 2,091,458 + +1.3 2,091,466 - +0.0 2,091,535 - -0.8 2,091,565 - CCNA_01949 0.14 +0.7 2,091,597 + CCNA_01949 0.21 +1.6 2,091,599 + CCNA_01949 0.21 +5.1 2,091,599 + CCNA_01949 0.21 +1.3 2,091,617 + CCNA_01949 0.25 +1.6 2,091,796 + CCNA_01949 0.62 +1.6 2,091,806 + CCNA_01949 0.64 +0.7 2,091,942 + +1.5 2,091,975 + +1.7 2,092,082 + +0.1 2,092,090 - +2.0 2,092,090 - +1.0 2,092,097 - +1.4
Or see this region's nucleotide sequence