Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3371 and Ac3H11_3372 are separated by 89 nucleotides Ac3H11_3372 and Ac3H11_3373 are separated by 54 nucleotides Ac3H11_3373 and Ac3H11_3374 are separated by 75 nucleotides Ac3H11_3374 and Ac3H11_3375 are separated by 200 nucleotides
Ac3H11_3371 - DNA repair protein RadA, at 53,690 to 55,150
_3371
Ac3H11_3372 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.n4), at 55,240 to 56,073
_3372
Ac3H11_3373 - 2-dehydropantoate 2-reductase (EC 1.1.1.169), at 56,128 to 57,105
_3373
Ac3H11_3374 - Glutathione S-transferase (EC 2.5.1.18), at 57,181 to 57,804
_3374
Ac3H11_3375 - putative binding-protein-dependent transport protein (periplasmic), at 58,005 to 59,585
_3375
Position (kb) 56
57
58 Strain fitness (log2 ratio) -2
-1
0
1
2 at 55.153 kb on + strand at 55.154 kb on - strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.166 kb on + strand at 55.166 kb on + strand at 55.166 kb on + strand at 55.166 kb on + strand at 55.166 kb on + strand at 55.167 kb on - strand at 55.167 kb on - strand at 55.167 kb on - strand at 55.167 kb on - strand at 55.188 kb on + strand at 55.324 kb on + strand, within Ac3H11_3372 at 55.324 kb on + strand, within Ac3H11_3372 at 55.324 kb on + strand, within Ac3H11_3372 at 55.325 kb on - strand at 55.355 kb on - strand, within Ac3H11_3372 at 55.519 kb on + strand, within Ac3H11_3372 at 55.519 kb on + strand, within Ac3H11_3372 at 55.604 kb on - strand, within Ac3H11_3372 at 55.675 kb on + strand, within Ac3H11_3372 at 55.675 kb on + strand, within Ac3H11_3372 at 55.675 kb on + strand, within Ac3H11_3372 at 56.068 kb on + strand at 56.069 kb on - strand at 56.071 kb on + strand at 56.071 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.139 kb on + strand at 56.139 kb on + strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.144 kb on - strand at 56.144 kb on - strand at 57.153 kb on - strand at 57.165 kb on + strand at 57.199 kb on + strand at 57.199 kb on + strand at 57.200 kb on - strand at 57.202 kb on + strand at 57.203 kb on - strand at 57.262 kb on + strand, within Ac3H11_3374 at 57.263 kb on - strand, within Ac3H11_3374 at 57.397 kb on + strand, within Ac3H11_3374 at 57.397 kb on + strand, within Ac3H11_3374 at 57.397 kb on + strand, within Ac3H11_3374 at 57.478 kb on + strand, within Ac3H11_3374 at 57.479 kb on - strand, within Ac3H11_3374 at 57.479 kb on - strand, within Ac3H11_3374 at 57.494 kb on + strand, within Ac3H11_3374 at 57.494 kb on + strand, within Ac3H11_3374 at 57.494 kb on + strand, within Ac3H11_3374 at 57.494 kb on + strand, within Ac3H11_3374 at 57.495 kb on - strand, within Ac3H11_3374 at 57.495 kb on - strand, within Ac3H11_3374 at 57.619 kb on + strand, within Ac3H11_3374 at 57.619 kb on + strand, within Ac3H11_3374 at 57.664 kb on + strand, within Ac3H11_3374 at 57.664 kb on + strand, within Ac3H11_3374 at 57.665 kb on - strand, within Ac3H11_3374 at 57.682 kb on + strand, within Ac3H11_3374 at 57.683 kb on - strand, within Ac3H11_3374 at 57.683 kb on - strand, within Ac3H11_3374 at 57.683 kb on - strand, within Ac3H11_3374 at 57.960 kb on + strand at 58.021 kb on + strand at 58.099 kb on + strand at 58.099 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 55,153 + +1.5 55,154 - -0.0 55,164 + +0.8 55,164 + -0.2 55,164 + +0.6 55,164 + +1.5 55,164 + -1.3 55,164 + -0.7 55,164 + -0.6 55,164 + +0.5 55,164 + +0.3 55,164 + +0.9 55,164 + -0.4 55,164 + +1.4 55,164 + +1.5 55,164 + -0.4 55,164 + +1.0 55,165 - +0.9 55,165 - -0.2 55,165 - -0.5 55,165 - +0.1 55,165 - +0.2 55,165 - +0.3 55,165 - -0.1 55,165 - +0.2 55,165 - +1.4 55,165 - -0.2 55,165 - -1.5 55,165 - +2.3 55,165 - -0.2 55,165 - +0.1 55,165 - +0.4 55,166 + -1.5 55,166 + +1.0 55,166 + -1.4 55,166 + -0.9 55,166 + +0.3 55,167 - +0.2 55,167 - -2.1 55,167 - -0.1 55,167 - +0.2 55,188 + +2.1 55,324 + Ac3H11_3372 0.10 -0.2 55,324 + Ac3H11_3372 0.10 -1.0 55,324 + Ac3H11_3372 0.10 +0.3 55,325 - +1.5 55,355 - Ac3H11_3372 0.14 +1.7 55,519 + Ac3H11_3372 0.33 +0.7 55,519 + Ac3H11_3372 0.33 +0.7 55,604 - Ac3H11_3372 0.44 -0.3 55,675 + Ac3H11_3372 0.52 -0.4 55,675 + Ac3H11_3372 0.52 +0.9 55,675 + Ac3H11_3372 0.52 -1.5 56,068 + +2.5 56,069 - -0.1 56,071 + -0.5 56,071 + +0.7 56,102 + +0.2 56,102 + +1.3 56,102 + +0.9 56,102 + +0.0 56,102 + +0.9 56,102 + +0.4 56,102 + -0.4 56,102 + +0.4 56,102 + +0.5 56,103 - -0.3 56,103 - +1.1 56,103 - -0.8 56,103 - +1.5 56,103 - +0.8 56,103 - +0.1 56,103 - +0.6 56,139 + -0.1 56,139 + +0.1 56,140 - -2.2 56,140 - -0.3 56,140 - -0.2 56,140 - +1.2 56,140 - +1.0 56,140 - +0.4 56,140 - +0.8 56,140 - -0.3 56,140 - -0.6 56,140 - -0.9 56,140 - -0.2 56,140 - -0.2 56,140 - -0.1 56,144 - +0.4 56,144 - -0.7 57,153 - -0.0 57,165 + +1.2 57,199 + -0.3 57,199 + +0.8 57,200 - +1.5 57,202 + -1.2 57,203 - +0.2 57,262 + Ac3H11_3374 0.13 -0.1 57,263 - Ac3H11_3374 0.13 -1.0 57,397 + Ac3H11_3374 0.35 +0.2 57,397 + Ac3H11_3374 0.35 -0.5 57,397 + Ac3H11_3374 0.35 +0.8 57,478 + Ac3H11_3374 0.48 +2.6 57,479 - Ac3H11_3374 0.48 +0.8 57,479 - Ac3H11_3374 0.48 -0.6 57,494 + Ac3H11_3374 0.50 -0.3 57,494 + Ac3H11_3374 0.50 -1.5 57,494 + Ac3H11_3374 0.50 -0.7 57,494 + Ac3H11_3374 0.50 -0.4 57,495 - Ac3H11_3374 0.50 -1.1 57,495 - Ac3H11_3374 0.50 +1.3 57,619 + Ac3H11_3374 0.70 -0.4 57,619 + Ac3H11_3374 0.70 -1.1 57,664 + Ac3H11_3374 0.77 -0.3 57,664 + Ac3H11_3374 0.77 +0.5 57,665 - Ac3H11_3374 0.78 -1.2 57,682 + Ac3H11_3374 0.80 -0.4 57,683 - Ac3H11_3374 0.80 -0.8 57,683 - Ac3H11_3374 0.80 -0.3 57,683 - Ac3H11_3374 0.80 +0.1 57,960 + -0.4 58,021 + -0.6 58,099 + -0.9 58,099 + +0.1
Or see this region's nucleotide sequence