Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2456 and Ac3H11_2457 are separated by 57 nucleotides Ac3H11_2457 and Ac3H11_2458 are separated by 205 nucleotides Ac3H11_2458 and Ac3H11_2459 are separated by 121 nucleotides Ac3H11_2459 and Ac3H11_2460 overlap by 38 nucleotides
Ac3H11_2456 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 716,802 to 719,150
_2456
Ac3H11_2457 - ATP-dependent Clp protease adaptor protein ClpS, at 719,208 to 719,492
_2457
Ac3H11_2458 - DNA polymerase III alpha subunit (EC 2.7.7.7), at 719,698 to 723,312
_2458
Ac3H11_2459 - Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB), at 723,434 to 724,231
_2459
Ac3H11_2460 - DinG family ATP-dependent helicase YoaA, at 724,194 to 726,254
_2460
Position (kb) 719
720
721
722
723
724 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5
6
7
8 at 718.780 kb on + strand, within Ac3H11_2456 at 718.780 kb on + strand, within Ac3H11_2456 at 718.780 kb on + strand, within Ac3H11_2456 at 718.780 kb on + strand, within Ac3H11_2456 at 718.780 kb on + strand, within Ac3H11_2456 at 718.780 kb on + strand, within Ac3H11_2456 at 718.780 kb on + strand, within Ac3H11_2456 at 718.780 kb on + strand, within Ac3H11_2456 at 718.781 kb on - strand, within Ac3H11_2456 at 718.781 kb on - strand, within Ac3H11_2456 at 718.781 kb on - strand, within Ac3H11_2456 at 718.781 kb on - strand, within Ac3H11_2456 at 718.781 kb on - strand, within Ac3H11_2456 at 718.781 kb on - strand, within Ac3H11_2456 at 718.781 kb on - strand, within Ac3H11_2456 at 718.781 kb on - strand, within Ac3H11_2456 at 718.783 kb on + strand, within Ac3H11_2456 at 718.783 kb on + strand, within Ac3H11_2456 at 718.783 kb on + strand, within Ac3H11_2456 at 718.783 kb on + strand, within Ac3H11_2456 at 718.783 kb on + strand, within Ac3H11_2456 at 718.783 kb on + strand, within Ac3H11_2456 at 718.783 kb on + strand, within Ac3H11_2456 at 718.783 kb on + strand, within Ac3H11_2456 at 718.783 kb on + strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.784 kb on - strand, within Ac3H11_2456 at 718.956 kb on - strand at 718.956 kb on - strand at 719.181 kb on + strand at 719.182 kb on - strand at 719.182 kb on - strand at 719.182 kb on - strand at 719.182 kb on - strand at 719.182 kb on - strand at 719.182 kb on - strand at 719.182 kb on - strand at 719.187 kb on + strand at 719.187 kb on + strand at 719.187 kb on + strand at 719.187 kb on + strand at 719.187 kb on + strand at 719.187 kb on + strand at 719.188 kb on - strand at 719.188 kb on - strand at 719.188 kb on - strand at 719.188 kb on - strand at 719.188 kb on - strand at 719.188 kb on - strand at 719.188 kb on - strand at 719.209 kb on + strand at 719.210 kb on - strand at 719.210 kb on - strand at 719.305 kb on + strand, within Ac3H11_2457 at 719.305 kb on + strand, within Ac3H11_2457 at 719.305 kb on + strand, within Ac3H11_2457 at 719.305 kb on + strand, within Ac3H11_2457 at 719.306 kb on - strand, within Ac3H11_2457 at 719.306 kb on - strand, within Ac3H11_2457 at 719.306 kb on - strand, within Ac3H11_2457 at 719.306 kb on - strand, within Ac3H11_2457 at 719.306 kb on - strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.422 kb on + strand, within Ac3H11_2457 at 719.423 kb on - strand, within Ac3H11_2457 at 719.423 kb on - strand, within Ac3H11_2457 at 719.449 kb on + strand, within Ac3H11_2457 at 719.449 kb on + strand, within Ac3H11_2457 at 719.449 kb on + strand, within Ac3H11_2457 at 719.449 kb on + strand, within Ac3H11_2457 at 719.449 kb on + strand, within Ac3H11_2457 at 719.449 kb on + strand, within Ac3H11_2457 at 719.449 kb on + strand, within Ac3H11_2457 at 719.449 kb on + strand, within Ac3H11_2457 at 719.449 kb on + strand, within Ac3H11_2457 at 719.450 kb on - strand, within Ac3H11_2457 at 719.450 kb on - strand, within Ac3H11_2457 at 719.450 kb on - strand, within Ac3H11_2457 at 719.450 kb on - strand, within Ac3H11_2457 at 719.450 kb on - strand, within Ac3H11_2457 at 719.450 kb on - strand, within Ac3H11_2457 at 719.450 kb on - strand, within Ac3H11_2457 at 719.450 kb on - strand, within Ac3H11_2457 at 719.525 kb on + strand at 719.579 kb on + strand at 719.579 kb on + strand at 719.579 kb on + strand at 719.579 kb on + strand at 719.580 kb on - strand at 719.580 kb on - strand at 719.580 kb on - strand at 719.580 kb on - strand at 719.699 kb on + strand at 719.699 kb on + strand at 719.699 kb on + strand at 719.700 kb on - strand at 719.700 kb on - strand at 719.700 kb on - strand at 723.248 kb on + strand at 723.248 kb on + strand at 723.248 kb on + strand at 723.248 kb on + strand at 723.248 kb on + strand at 723.248 kb on + strand at 723.248 kb on + strand at 723.248 kb on + strand at 723.248 kb on + strand at 723.249 kb on - strand at 723.249 kb on - strand at 723.316 kb on + strand at 723.316 kb on + strand at 723.316 kb on + strand at 723.316 kb on + strand at 723.316 kb on + strand at 723.316 kb on + strand at 723.316 kb on + strand at 723.316 kb on + strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 723.317 kb on - strand at 724.178 kb on + strand at 724.179 kb on - strand at 724.179 kb on - strand at 724.229 kb on + strand at 724.229 kb on + strand at 724.230 kb on - strand at 724.230 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 718,780 + Ac3H11_2456 0.84 +6.3 718,780 + Ac3H11_2456 0.84 +7.8 718,780 + Ac3H11_2456 0.84 +3.4 718,780 + Ac3H11_2456 0.84 +5.2 718,780 + Ac3H11_2456 0.84 +5.4 718,780 + Ac3H11_2456 0.84 +4.9 718,780 + Ac3H11_2456 0.84 +7.2 718,780 + Ac3H11_2456 0.84 +5.7 718,781 - Ac3H11_2456 0.84 +1.3 718,781 - Ac3H11_2456 0.84 +6.9 718,781 - Ac3H11_2456 0.84 +6.0 718,781 - Ac3H11_2456 0.84 +5.6 718,781 - Ac3H11_2456 0.84 +5.2 718,781 - Ac3H11_2456 0.84 +6.3 718,781 - Ac3H11_2456 0.84 +6.0 718,781 - Ac3H11_2456 0.84 +5.0 718,783 + Ac3H11_2456 0.84 +7.0 718,783 + Ac3H11_2456 0.84 +6.9 718,783 + Ac3H11_2456 0.84 +0.4 718,783 + Ac3H11_2456 0.84 +5.1 718,783 + Ac3H11_2456 0.84 +5.2 718,783 + Ac3H11_2456 0.84 +4.5 718,783 + Ac3H11_2456 0.84 +6.9 718,783 + Ac3H11_2456 0.84 +6.0 718,783 + Ac3H11_2456 0.84 +6.1 718,784 - Ac3H11_2456 0.84 +6.2 718,784 - Ac3H11_2456 0.84 +4.1 718,784 - Ac3H11_2456 0.84 +5.1 718,784 - Ac3H11_2456 0.84 +6.3 718,784 - Ac3H11_2456 0.84 +4.4 718,784 - Ac3H11_2456 0.84 +6.0 718,784 - Ac3H11_2456 0.84 +0.4 718,784 - Ac3H11_2456 0.84 +5.5 718,784 - Ac3H11_2456 0.84 +5.2 718,784 - Ac3H11_2456 0.84 +5.1 718,784 - Ac3H11_2456 0.84 +7.8 718,784 - Ac3H11_2456 0.84 +6.5 718,784 - Ac3H11_2456 0.84 +7.4 718,784 - Ac3H11_2456 0.84 +4.1 718,956 - +6.9 718,956 - +7.4 719,181 + +4.3 719,182 - +1.3 719,182 - -0.9 719,182 - +0.1 719,182 - -0.5 719,182 - -2.0 719,182 - +0.0 719,182 - +0.2 719,187 + +0.1 719,187 + +0.2 719,187 + +0.0 719,187 + -0.2 719,187 + +1.5 719,187 + -0.3 719,188 - +0.1 719,188 - -0.1 719,188 - -0.5 719,188 - -2.1 719,188 - -0.0 719,188 - -1.0 719,188 - +0.1 719,209 + +3.4 719,210 - -0.1 719,210 - -0.3 719,305 + Ac3H11_2457 0.34 +1.3 719,305 + Ac3H11_2457 0.34 +2.6 719,305 + Ac3H11_2457 0.34 +0.7 719,305 + Ac3H11_2457 0.34 +1.0 719,306 - Ac3H11_2457 0.34 -0.3 719,306 - Ac3H11_2457 0.34 +0.6 719,306 - Ac3H11_2457 0.34 +0.1 719,306 - Ac3H11_2457 0.34 -0.3 719,306 - Ac3H11_2457 0.34 +0.3 719,422 + Ac3H11_2457 0.75 +1.2 719,422 + Ac3H11_2457 0.75 -0.4 719,422 + Ac3H11_2457 0.75 -1.3 719,422 + Ac3H11_2457 0.75 +1.7 719,422 + Ac3H11_2457 0.75 +2.3 719,422 + Ac3H11_2457 0.75 +1.5 719,422 + Ac3H11_2457 0.75 +2.0 719,422 + Ac3H11_2457 0.75 +1.4 719,422 + Ac3H11_2457 0.75 +1.3 719,422 + Ac3H11_2457 0.75 +0.9 719,423 - Ac3H11_2457 0.75 +0.0 719,423 - Ac3H11_2457 0.75 +0.6 719,449 + Ac3H11_2457 0.85 +1.2 719,449 + Ac3H11_2457 0.85 +1.0 719,449 + Ac3H11_2457 0.85 +1.0 719,449 + Ac3H11_2457 0.85 +0.7 719,449 + Ac3H11_2457 0.85 +1.7 719,449 + Ac3H11_2457 0.85 +0.5 719,449 + Ac3H11_2457 0.85 +1.1 719,449 + Ac3H11_2457 0.85 +0.7 719,449 + Ac3H11_2457 0.85 +1.7 719,450 - Ac3H11_2457 0.85 -1.5 719,450 - Ac3H11_2457 0.85 +0.2 719,450 - Ac3H11_2457 0.85 -2.1 719,450 - Ac3H11_2457 0.85 -0.4 719,450 - Ac3H11_2457 0.85 -0.2 719,450 - Ac3H11_2457 0.85 -0.5 719,450 - Ac3H11_2457 0.85 -1.6 719,450 - Ac3H11_2457 0.85 -0.0 719,525 + +0.3 719,579 + +0.4 719,579 + +1.4 719,579 + +0.3 719,579 + -0.3 719,580 - -0.6 719,580 - -0.8 719,580 - -0.2 719,580 - +2.2 719,699 + +1.3 719,699 + -0.0 719,699 + -0.6 719,700 - +0.3 719,700 - +2.3 719,700 - -1.0 723,248 + -2.2 723,248 + -1.1 723,248 + -1.4 723,248 + -1.9 723,248 + +0.1 723,248 + +0.6 723,248 + +0.5 723,248 + +0.4 723,248 + -2.0 723,249 - +0.9 723,249 - -0.0 723,316 + -0.4 723,316 + -1.5 723,316 + -0.5 723,316 + +0.4 723,316 + -0.3 723,316 + -0.3 723,316 + +1.8 723,316 + +0.0 723,317 - -0.4 723,317 - +1.3 723,317 - -1.1 723,317 - +1.4 723,317 - +0.1 723,317 - -0.3 723,317 - +0.1 723,317 - +1.0 723,317 - +2.6 723,317 - -1.5 723,317 - +0.0 723,317 - +1.5 723,317 - +1.1 723,317 - -0.6 724,178 + +0.7 724,179 - +0.8 724,179 - -0.8 724,229 + +0.0 724,229 + -0.6 724,230 - -0.2 724,230 - +0.5
Or see this region's nucleotide sequence