Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14835 and AO353_14840 are separated by 196 nucleotides AO353_14840 and AO353_14845 are separated by 13 nucleotides
AO353_14835: AO353_14835 - FAD-dependent oxidoreductase, at 3,283,674 to 3,284,660
_14835
AO353_14840: AO353_14840 - NAD-dependent dehydratase, at 3,284,857 to 3,285,759
_14840
AO353_14845: AO353_14845 - ferrochelatase, at 3,285,773 to 3,286,795
_14845
Position (kb)
3284
3285
3286 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3283.925 kb on + strand, within AO353_14835 at 3283.925 kb on + strand, within AO353_14835 at 3283.926 kb on - strand, within AO353_14835 at 3283.926 kb on - strand, within AO353_14835 at 3283.926 kb on - strand, within AO353_14835 at 3283.937 kb on + strand, within AO353_14835 at 3283.937 kb on + strand, within AO353_14835 at 3283.937 kb on + strand, within AO353_14835 at 3283.937 kb on + strand, within AO353_14835 at 3283.938 kb on - strand, within AO353_14835 at 3283.938 kb on - strand, within AO353_14835 at 3283.938 kb on - strand, within AO353_14835 at 3283.938 kb on - strand, within AO353_14835 at 3283.938 kb on - strand, within AO353_14835 at 3283.972 kb on - strand, within AO353_14835 at 3283.972 kb on - strand, within AO353_14835 at 3284.046 kb on + strand, within AO353_14835 at 3284.046 kb on + strand, within AO353_14835 at 3284.046 kb on + strand, within AO353_14835 at 3284.047 kb on - strand, within AO353_14835 at 3284.047 kb on - strand, within AO353_14835 at 3284.122 kb on - strand, within AO353_14835 at 3284.267 kb on - strand, within AO353_14835 at 3284.267 kb on - strand, within AO353_14835 at 3284.267 kb on - strand, within AO353_14835 at 3284.267 kb on - strand, within AO353_14835 at 3284.399 kb on - strand, within AO353_14835 at 3284.405 kb on - strand, within AO353_14835 at 3284.405 kb on - strand, within AO353_14835 at 3284.405 kb on - strand, within AO353_14835 at 3284.405 kb on - strand, within AO353_14835 at 3284.491 kb on + strand, within AO353_14835 at 3284.492 kb on - strand, within AO353_14835 at 3284.492 kb on - strand, within AO353_14835 at 3284.492 kb on - strand, within AO353_14835 at 3284.492 kb on - strand, within AO353_14835 at 3284.492 kb on - strand, within AO353_14835 at 3284.584 kb on + strand at 3284.652 kb on + strand at 3284.652 kb on + strand at 3284.653 kb on - strand at 3284.653 kb on - strand at 3284.653 kb on - strand at 3284.653 kb on - strand at 3284.660 kb on + strand at 3284.660 kb on + strand at 3284.660 kb on + strand at 3284.660 kb on + strand at 3284.661 kb on - strand at 3284.674 kb on - strand at 3284.674 kb on - strand at 3284.674 kb on - strand at 3284.683 kb on + strand at 3284.684 kb on - strand at 3284.690 kb on + strand at 3284.702 kb on + strand at 3284.708 kb on + strand at 3284.709 kb on - strand at 3284.710 kb on + strand at 3284.710 kb on + strand at 3284.710 kb on + strand at 3284.710 kb on + strand at 3284.711 kb on - strand at 3284.711 kb on - strand at 3284.711 kb on - strand at 3284.711 kb on - strand at 3284.711 kb on - strand at 3284.711 kb on - strand at 3284.730 kb on + strand at 3284.730 kb on + strand at 3284.764 kb on + strand at 3284.764 kb on + strand at 3284.764 kb on + strand at 3284.764 kb on + strand at 3284.764 kb on + strand at 3284.765 kb on - strand at 3284.765 kb on - strand at 3284.770 kb on + strand at 3284.770 kb on + strand at 3284.770 kb on + strand at 3284.771 kb on - strand at 3284.807 kb on + strand at 3284.808 kb on - strand at 3284.808 kb on - strand at 3284.809 kb on + strand at 3284.809 kb on + strand at 3284.810 kb on - strand at 3284.815 kb on + strand at 3284.816 kb on - strand at 3284.816 kb on - strand at 3284.816 kb on - strand at 3284.816 kb on - strand at 3284.820 kb on + strand at 3284.820 kb on + strand at 3284.820 kb on + strand at 3284.820 kb on + strand at 3284.820 kb on + strand at 3284.820 kb on + strand at 3284.821 kb on - strand at 3284.821 kb on - strand at 3284.821 kb on - strand at 3284.832 kb on + strand at 3284.832 kb on + strand at 3284.833 kb on - strand at 3284.833 kb on - strand at 3284.833 kb on - strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.864 kb on + strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.865 kb on - strand at 3284.891 kb on + strand at 3284.891 kb on + strand at 3284.891 kb on + strand at 3284.892 kb on - strand at 3284.932 kb on - strand at 3284.990 kb on + strand, within AO353_14840 at 3284.990 kb on + strand, within AO353_14840 at 3284.990 kb on + strand, within AO353_14840 at 3284.990 kb on + strand, within AO353_14840 at 3284.991 kb on - strand, within AO353_14840 at 3284.991 kb on - strand, within AO353_14840 at 3284.991 kb on - strand, within AO353_14840 at 3284.991 kb on - strand, within AO353_14840 at 3285.205 kb on + strand, within AO353_14840 at 3285.389 kb on + strand, within AO353_14840 at 3285.390 kb on - strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.517 kb on + strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.518 kb on - strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.519 kb on + strand, within AO353_14840 at 3285.520 kb on - strand, within AO353_14840 at 3285.520 kb on - strand, within AO353_14840 at 3285.520 kb on - strand, within AO353_14840 at 3285.520 kb on - strand, within AO353_14840 at 3285.520 kb on - strand, within AO353_14840 at 3285.520 kb on - strand, within AO353_14840 at 3285.762 kb on + strand at 3285.762 kb on + strand at 3285.762 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,283,925 + AO353_14835 0.25 -1.0 3,283,925 + AO353_14835 0.25 -1.1 3,283,926 - AO353_14835 0.26 +0.6 3,283,926 - AO353_14835 0.26 -1.3 3,283,926 - AO353_14835 0.26 -2.1 3,283,937 + AO353_14835 0.27 -0.4 3,283,937 + AO353_14835 0.27 +1.4 3,283,937 + AO353_14835 0.27 -1.9 3,283,937 + AO353_14835 0.27 -0.5 3,283,938 - AO353_14835 0.27 -0.5 3,283,938 - AO353_14835 0.27 -1.7 3,283,938 - AO353_14835 0.27 +0.1 3,283,938 - AO353_14835 0.27 +0.6 3,283,938 - AO353_14835 0.27 -0.6 3,283,972 - AO353_14835 0.30 +0.7 3,283,972 - AO353_14835 0.30 +2.0 3,284,046 + AO353_14835 0.38 -1.1 3,284,046 + AO353_14835 0.38 -0.8 3,284,046 + AO353_14835 0.38 +0.2 3,284,047 - AO353_14835 0.38 -0.5 3,284,047 - AO353_14835 0.38 -0.5 3,284,122 - AO353_14835 0.45 -0.8 3,284,267 - AO353_14835 0.60 +0.3 3,284,267 - AO353_14835 0.60 +0.2 3,284,267 - AO353_14835 0.60 +1.9 3,284,267 - AO353_14835 0.60 +0.3 3,284,399 - AO353_14835 0.73 +0.0 3,284,405 - AO353_14835 0.74 +0.5 3,284,405 - AO353_14835 0.74 -1.2 3,284,405 - AO353_14835 0.74 +0.1 3,284,405 - AO353_14835 0.74 -0.2 3,284,491 + AO353_14835 0.83 +1.9 3,284,492 - AO353_14835 0.83 -0.7 3,284,492 - AO353_14835 0.83 -0.8 3,284,492 - AO353_14835 0.83 +0.2 3,284,492 - AO353_14835 0.83 -0.3 3,284,492 - AO353_14835 0.83 -1.1 3,284,584 + +0.1 3,284,652 + +0.2 3,284,652 + +0.7 3,284,653 - -1.7 3,284,653 - +1.5 3,284,653 - +0.9 3,284,653 - -0.5 3,284,660 + -0.9 3,284,660 + -0.8 3,284,660 + +0.6 3,284,660 + -0.4 3,284,661 - -1.5 3,284,674 - -0.1 3,284,674 - -1.1 3,284,674 - -1.1 3,284,683 + +1.4 3,284,684 - -0.8 3,284,690 + -0.5 3,284,702 + +1.4 3,284,708 + +2.2 3,284,709 - +0.3 3,284,710 + +0.6 3,284,710 + +0.8 3,284,710 + -0.7 3,284,710 + +0.4 3,284,711 - +1.7 3,284,711 - -1.0 3,284,711 - +0.9 3,284,711 - +0.6 3,284,711 - +1.0 3,284,711 - -0.4 3,284,730 + -0.3 3,284,730 + +1.5 3,284,764 + +1.7 3,284,764 + -1.1 3,284,764 + -0.1 3,284,764 + +1.9 3,284,764 + +0.8 3,284,765 - -1.4 3,284,765 - +0.4 3,284,770 + +1.2 3,284,770 + -0.0 3,284,770 + -0.0 3,284,771 - -1.6 3,284,807 + +1.0 3,284,808 - -0.4 3,284,808 - -0.6 3,284,809 + +0.2 3,284,809 + -0.5 3,284,810 - +0.8 3,284,815 + +0.0 3,284,816 - +0.2 3,284,816 - -1.0 3,284,816 - +0.1 3,284,816 - -0.0 3,284,820 + +2.2 3,284,820 + -0.3 3,284,820 + +0.4 3,284,820 + +1.8 3,284,820 + +0.9 3,284,820 + +1.7 3,284,821 - -0.4 3,284,821 - -0.1 3,284,821 - +0.1 3,284,832 + +1.8 3,284,832 + -0.6 3,284,833 - -0.1 3,284,833 - -3.1 3,284,833 - +0.6 3,284,864 + -0.2 3,284,864 + +1.2 3,284,864 + -0.3 3,284,864 + -0.4 3,284,864 + -0.0 3,284,864 + +1.3 3,284,864 + +0.4 3,284,864 + +0.6 3,284,864 + +0.4 3,284,864 + -0.2 3,284,864 + -0.5 3,284,864 + +2.8 3,284,864 + +0.3 3,284,865 - +1.2 3,284,865 - +1.7 3,284,865 - +0.5 3,284,865 - -0.2 3,284,865 - +1.0 3,284,865 - -0.5 3,284,865 - +1.4 3,284,865 - -1.5 3,284,865 - -0.2 3,284,865 - +3.3 3,284,865 - +0.1 3,284,865 - -0.1 3,284,865 - +0.1 3,284,865 - +0.9 3,284,865 - -1.1 3,284,865 - +0.0 3,284,865 - +0.1 3,284,865 - -0.1 3,284,865 - -0.8 3,284,865 - +0.5 3,284,865 - +0.8 3,284,891 + -0.3 3,284,891 + +1.0 3,284,891 + +0.9 3,284,892 - -0.1 3,284,932 - -0.0 3,284,990 + AO353_14840 0.15 +0.2 3,284,990 + AO353_14840 0.15 +0.1 3,284,990 + AO353_14840 0.15 -0.4 3,284,990 + AO353_14840 0.15 +0.7 3,284,991 - AO353_14840 0.15 -0.2 3,284,991 - AO353_14840 0.15 -0.9 3,284,991 - AO353_14840 0.15 +0.3 3,284,991 - AO353_14840 0.15 -1.6 3,285,205 + AO353_14840 0.39 +0.9 3,285,389 + AO353_14840 0.59 +1.2 3,285,390 - AO353_14840 0.59 +0.6 3,285,517 + AO353_14840 0.73 +1.0 3,285,517 + AO353_14840 0.73 +0.8 3,285,517 + AO353_14840 0.73 +0.2 3,285,517 + AO353_14840 0.73 +0.2 3,285,517 + AO353_14840 0.73 +1.6 3,285,517 + AO353_14840 0.73 +1.4 3,285,517 + AO353_14840 0.73 +1.8 3,285,517 + AO353_14840 0.73 +1.0 3,285,517 + AO353_14840 0.73 -0.6 3,285,517 + AO353_14840 0.73 +1.5 3,285,517 + AO353_14840 0.73 +0.1 3,285,517 + AO353_14840 0.73 +1.6 3,285,517 + AO353_14840 0.73 +0.6 3,285,517 + AO353_14840 0.73 +2.0 3,285,518 - AO353_14840 0.73 -0.5 3,285,518 - AO353_14840 0.73 +0.5 3,285,518 - AO353_14840 0.73 -0.6 3,285,518 - AO353_14840 0.73 +0.7 3,285,518 - AO353_14840 0.73 +0.7 3,285,518 - AO353_14840 0.73 -0.1 3,285,518 - AO353_14840 0.73 +0.8 3,285,518 - AO353_14840 0.73 -0.8 3,285,518 - AO353_14840 0.73 +0.9 3,285,518 - AO353_14840 0.73 -1.4 3,285,518 - AO353_14840 0.73 +1.2 3,285,518 - AO353_14840 0.73 +1.4 3,285,518 - AO353_14840 0.73 -0.8 3,285,519 + AO353_14840 0.73 +1.7 3,285,519 + AO353_14840 0.73 +0.8 3,285,519 + AO353_14840 0.73 +0.5 3,285,519 + AO353_14840 0.73 +0.6 3,285,519 + AO353_14840 0.73 +2.2 3,285,519 + AO353_14840 0.73 +1.1 3,285,519 + AO353_14840 0.73 -0.1 3,285,519 + AO353_14840 0.73 +2.2 3,285,519 + AO353_14840 0.73 +1.6 3,285,519 + AO353_14840 0.73 +0.9 3,285,519 + AO353_14840 0.73 +1.3 3,285,519 + AO353_14840 0.73 +1.2 3,285,519 + AO353_14840 0.73 +1.8 3,285,520 - AO353_14840 0.73 -1.5 3,285,520 - AO353_14840 0.73 -0.1 3,285,520 - AO353_14840 0.73 +0.3 3,285,520 - AO353_14840 0.73 -0.4 3,285,520 - AO353_14840 0.73 -1.0 3,285,520 - AO353_14840 0.73 -0.1 3,285,762 + +1.4 3,285,762 + -0.0 3,285,762 + +0.4
Or see this region's nucleotide sequence