Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14840

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_14835 and AO353_14840 are separated by 196 nucleotidesAO353_14840 and AO353_14845 are separated by 13 nucleotides AO353_14835: AO353_14835 - FAD-dependent oxidoreductase, at 3,283,674 to 3,284,660 _14835 AO353_14840: AO353_14840 - NAD-dependent dehydratase, at 3,284,857 to 3,285,759 _14840 AO353_14845: AO353_14845 - ferrochelatase, at 3,285,773 to 3,286,795 _14845 Position (kb) 3284 3285 3286Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3283.925 kb on + strand, within AO353_14835at 3283.925 kb on + strand, within AO353_14835at 3283.926 kb on - strand, within AO353_14835at 3283.926 kb on - strand, within AO353_14835at 3283.926 kb on - strand, within AO353_14835at 3283.937 kb on + strand, within AO353_14835at 3283.937 kb on + strand, within AO353_14835at 3283.937 kb on + strand, within AO353_14835at 3283.937 kb on + strand, within AO353_14835at 3283.938 kb on - strand, within AO353_14835at 3283.938 kb on - strand, within AO353_14835at 3283.938 kb on - strand, within AO353_14835at 3283.938 kb on - strand, within AO353_14835at 3283.938 kb on - strand, within AO353_14835at 3283.972 kb on - strand, within AO353_14835at 3283.972 kb on - strand, within AO353_14835at 3284.046 kb on + strand, within AO353_14835at 3284.046 kb on + strand, within AO353_14835at 3284.046 kb on + strand, within AO353_14835at 3284.047 kb on - strand, within AO353_14835at 3284.047 kb on - strand, within AO353_14835at 3284.122 kb on - strand, within AO353_14835at 3284.267 kb on - strand, within AO353_14835at 3284.267 kb on - strand, within AO353_14835at 3284.267 kb on - strand, within AO353_14835at 3284.267 kb on - strand, within AO353_14835at 3284.399 kb on - strand, within AO353_14835at 3284.405 kb on - strand, within AO353_14835at 3284.405 kb on - strand, within AO353_14835at 3284.405 kb on - strand, within AO353_14835at 3284.405 kb on - strand, within AO353_14835at 3284.491 kb on + strand, within AO353_14835at 3284.492 kb on - strand, within AO353_14835at 3284.492 kb on - strand, within AO353_14835at 3284.492 kb on - strand, within AO353_14835at 3284.492 kb on - strand, within AO353_14835at 3284.492 kb on - strand, within AO353_14835at 3284.584 kb on + strandat 3284.652 kb on + strandat 3284.652 kb on + strandat 3284.653 kb on - strandat 3284.653 kb on - strandat 3284.653 kb on - strandat 3284.653 kb on - strandat 3284.660 kb on + strandat 3284.660 kb on + strandat 3284.660 kb on + strandat 3284.660 kb on + strandat 3284.661 kb on - strandat 3284.674 kb on - strandat 3284.674 kb on - strandat 3284.674 kb on - strandat 3284.683 kb on + strandat 3284.684 kb on - strandat 3284.690 kb on + strandat 3284.702 kb on + strandat 3284.708 kb on + strandat 3284.709 kb on - strandat 3284.710 kb on + strandat 3284.710 kb on + strandat 3284.710 kb on + strandat 3284.710 kb on + strandat 3284.711 kb on - strandat 3284.711 kb on - strandat 3284.711 kb on - strandat 3284.711 kb on - strandat 3284.711 kb on - strandat 3284.711 kb on - strandat 3284.730 kb on + strandat 3284.730 kb on + strandat 3284.764 kb on + strandat 3284.764 kb on + strandat 3284.764 kb on + strandat 3284.764 kb on + strandat 3284.764 kb on + strandat 3284.765 kb on - strandat 3284.765 kb on - strandat 3284.770 kb on + strandat 3284.770 kb on + strandat 3284.770 kb on + strandat 3284.771 kb on - strandat 3284.807 kb on + strandat 3284.808 kb on - strandat 3284.808 kb on - strandat 3284.809 kb on + strandat 3284.809 kb on + strandat 3284.810 kb on - strandat 3284.815 kb on + strandat 3284.816 kb on - strandat 3284.816 kb on - strandat 3284.816 kb on - strandat 3284.816 kb on - strandat 3284.820 kb on + strandat 3284.820 kb on + strandat 3284.820 kb on + strandat 3284.820 kb on + strandat 3284.820 kb on + strandat 3284.820 kb on + strandat 3284.821 kb on - strandat 3284.821 kb on - strandat 3284.821 kb on - strandat 3284.832 kb on + strandat 3284.832 kb on + strandat 3284.833 kb on - strandat 3284.833 kb on - strandat 3284.833 kb on - strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.864 kb on + strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.865 kb on - strandat 3284.891 kb on + strandat 3284.891 kb on + strandat 3284.891 kb on + strandat 3284.892 kb on - strandat 3284.932 kb on - strandat 3284.990 kb on + strand, within AO353_14840at 3284.990 kb on + strand, within AO353_14840at 3284.990 kb on + strand, within AO353_14840at 3284.990 kb on + strand, within AO353_14840at 3284.991 kb on - strand, within AO353_14840at 3284.991 kb on - strand, within AO353_14840at 3284.991 kb on - strand, within AO353_14840at 3284.991 kb on - strand, within AO353_14840at 3285.205 kb on + strand, within AO353_14840at 3285.389 kb on + strand, within AO353_14840at 3285.390 kb on - strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.517 kb on + strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.518 kb on - strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.519 kb on + strand, within AO353_14840at 3285.520 kb on - strand, within AO353_14840at 3285.520 kb on - strand, within AO353_14840at 3285.520 kb on - strand, within AO353_14840at 3285.520 kb on - strand, within AO353_14840at 3285.520 kb on - strand, within AO353_14840at 3285.520 kb on - strand, within AO353_14840at 3285.762 kb on + strandat 3285.762 kb on + strandat 3285.762 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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3,283,925 + AO353_14835 0.25 -1.0
3,283,925 + AO353_14835 0.25 -1.1
3,283,926 - AO353_14835 0.26 +0.6
3,283,926 - AO353_14835 0.26 -1.3
3,283,926 - AO353_14835 0.26 -2.1
3,283,937 + AO353_14835 0.27 -0.4
3,283,937 + AO353_14835 0.27 +1.4
3,283,937 + AO353_14835 0.27 -1.9
3,283,937 + AO353_14835 0.27 -0.5
3,283,938 - AO353_14835 0.27 -0.5
3,283,938 - AO353_14835 0.27 -1.7
3,283,938 - AO353_14835 0.27 +0.1
3,283,938 - AO353_14835 0.27 +0.6
3,283,938 - AO353_14835 0.27 -0.6
3,283,972 - AO353_14835 0.30 +0.7
3,283,972 - AO353_14835 0.30 +2.0
3,284,046 + AO353_14835 0.38 -1.1
3,284,046 + AO353_14835 0.38 -0.8
3,284,046 + AO353_14835 0.38 +0.2
3,284,047 - AO353_14835 0.38 -0.5
3,284,047 - AO353_14835 0.38 -0.5
3,284,122 - AO353_14835 0.45 -0.8
3,284,267 - AO353_14835 0.60 +0.3
3,284,267 - AO353_14835 0.60 +0.2
3,284,267 - AO353_14835 0.60 +1.9
3,284,267 - AO353_14835 0.60 +0.3
3,284,399 - AO353_14835 0.73 +0.0
3,284,405 - AO353_14835 0.74 +0.5
3,284,405 - AO353_14835 0.74 -1.2
3,284,405 - AO353_14835 0.74 +0.1
3,284,405 - AO353_14835 0.74 -0.2
3,284,491 + AO353_14835 0.83 +1.9
3,284,492 - AO353_14835 0.83 -0.7
3,284,492 - AO353_14835 0.83 -0.8
3,284,492 - AO353_14835 0.83 +0.2
3,284,492 - AO353_14835 0.83 -0.3
3,284,492 - AO353_14835 0.83 -1.1
3,284,584 + +0.1
3,284,652 + +0.2
3,284,652 + +0.7
3,284,653 - -1.7
3,284,653 - +1.5
3,284,653 - +0.9
3,284,653 - -0.5
3,284,660 + -0.9
3,284,660 + -0.8
3,284,660 + +0.6
3,284,660 + -0.4
3,284,661 - -1.5
3,284,674 - -0.1
3,284,674 - -1.1
3,284,674 - -1.1
3,284,683 + +1.4
3,284,684 - -0.8
3,284,690 + -0.5
3,284,702 + +1.4
3,284,708 + +2.2
3,284,709 - +0.3
3,284,710 + +0.6
3,284,710 + +0.8
3,284,710 + -0.7
3,284,710 + +0.4
3,284,711 - +1.7
3,284,711 - -1.0
3,284,711 - +0.9
3,284,711 - +0.6
3,284,711 - +1.0
3,284,711 - -0.4
3,284,730 + -0.3
3,284,730 + +1.5
3,284,764 + +1.7
3,284,764 + -1.1
3,284,764 + -0.1
3,284,764 + +1.9
3,284,764 + +0.8
3,284,765 - -1.4
3,284,765 - +0.4
3,284,770 + +1.2
3,284,770 + -0.0
3,284,770 + -0.0
3,284,771 - -1.6
3,284,807 + +1.0
3,284,808 - -0.4
3,284,808 - -0.6
3,284,809 + +0.2
3,284,809 + -0.5
3,284,810 - +0.8
3,284,815 + +0.0
3,284,816 - +0.2
3,284,816 - -1.0
3,284,816 - +0.1
3,284,816 - -0.0
3,284,820 + +2.2
3,284,820 + -0.3
3,284,820 + +0.4
3,284,820 + +1.8
3,284,820 + +0.9
3,284,820 + +1.7
3,284,821 - -0.4
3,284,821 - -0.1
3,284,821 - +0.1
3,284,832 + +1.8
3,284,832 + -0.6
3,284,833 - -0.1
3,284,833 - -3.1
3,284,833 - +0.6
3,284,864 + -0.2
3,284,864 + +1.2
3,284,864 + -0.3
3,284,864 + -0.4
3,284,864 + -0.0
3,284,864 + +1.3
3,284,864 + +0.4
3,284,864 + +0.6
3,284,864 + +0.4
3,284,864 + -0.2
3,284,864 + -0.5
3,284,864 + +2.8
3,284,864 + +0.3
3,284,865 - +1.2
3,284,865 - +1.7
3,284,865 - +0.5
3,284,865 - -0.2
3,284,865 - +1.0
3,284,865 - -0.5
3,284,865 - +1.4
3,284,865 - -1.5
3,284,865 - -0.2
3,284,865 - +3.3
3,284,865 - +0.1
3,284,865 - -0.1
3,284,865 - +0.1
3,284,865 - +0.9
3,284,865 - -1.1
3,284,865 - +0.0
3,284,865 - +0.1
3,284,865 - -0.1
3,284,865 - -0.8
3,284,865 - +0.5
3,284,865 - +0.8
3,284,891 + -0.3
3,284,891 + +1.0
3,284,891 + +0.9
3,284,892 - -0.1
3,284,932 - -0.0
3,284,990 + AO353_14840 0.15 +0.2
3,284,990 + AO353_14840 0.15 +0.1
3,284,990 + AO353_14840 0.15 -0.4
3,284,990 + AO353_14840 0.15 +0.7
3,284,991 - AO353_14840 0.15 -0.2
3,284,991 - AO353_14840 0.15 -0.9
3,284,991 - AO353_14840 0.15 +0.3
3,284,991 - AO353_14840 0.15 -1.6
3,285,205 + AO353_14840 0.39 +0.9
3,285,389 + AO353_14840 0.59 +1.2
3,285,390 - AO353_14840 0.59 +0.6
3,285,517 + AO353_14840 0.73 +1.0
3,285,517 + AO353_14840 0.73 +0.8
3,285,517 + AO353_14840 0.73 +0.2
3,285,517 + AO353_14840 0.73 +0.2
3,285,517 + AO353_14840 0.73 +1.6
3,285,517 + AO353_14840 0.73 +1.4
3,285,517 + AO353_14840 0.73 +1.8
3,285,517 + AO353_14840 0.73 +1.0
3,285,517 + AO353_14840 0.73 -0.6
3,285,517 + AO353_14840 0.73 +1.5
3,285,517 + AO353_14840 0.73 +0.1
3,285,517 + AO353_14840 0.73 +1.6
3,285,517 + AO353_14840 0.73 +0.6
3,285,517 + AO353_14840 0.73 +2.0
3,285,518 - AO353_14840 0.73 -0.5
3,285,518 - AO353_14840 0.73 +0.5
3,285,518 - AO353_14840 0.73 -0.6
3,285,518 - AO353_14840 0.73 +0.7
3,285,518 - AO353_14840 0.73 +0.7
3,285,518 - AO353_14840 0.73 -0.1
3,285,518 - AO353_14840 0.73 +0.8
3,285,518 - AO353_14840 0.73 -0.8
3,285,518 - AO353_14840 0.73 +0.9
3,285,518 - AO353_14840 0.73 -1.4
3,285,518 - AO353_14840 0.73 +1.2
3,285,518 - AO353_14840 0.73 +1.4
3,285,518 - AO353_14840 0.73 -0.8
3,285,519 + AO353_14840 0.73 +1.7
3,285,519 + AO353_14840 0.73 +0.8
3,285,519 + AO353_14840 0.73 +0.5
3,285,519 + AO353_14840 0.73 +0.6
3,285,519 + AO353_14840 0.73 +2.2
3,285,519 + AO353_14840 0.73 +1.1
3,285,519 + AO353_14840 0.73 -0.1
3,285,519 + AO353_14840 0.73 +2.2
3,285,519 + AO353_14840 0.73 +1.6
3,285,519 + AO353_14840 0.73 +0.9
3,285,519 + AO353_14840 0.73 +1.3
3,285,519 + AO353_14840 0.73 +1.2
3,285,519 + AO353_14840 0.73 +1.8
3,285,520 - AO353_14840 0.73 -1.5
3,285,520 - AO353_14840 0.73 -0.1
3,285,520 - AO353_14840 0.73 +0.3
3,285,520 - AO353_14840 0.73 -0.4
3,285,520 - AO353_14840 0.73 -1.0
3,285,520 - AO353_14840 0.73 -0.1
3,285,762 + +1.4
3,285,762 + -0.0
3,285,762 + +0.4

Or see this region's nucleotide sequence