Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14775 and AO353_14780 are separated by 216 nucleotides AO353_14780 and AO353_14785 overlap by 4 nucleotides
AO353_14775: AO353_14775 - hypothetical protein, at 3,271,582 to 3,273,306
_14775
AO353_14780: AO353_14780 - glutamyl-tRNA reductase, at 3,273,523 to 3,274,812
_14780
AO353_14785: AO353_14785 - peptide chain release factor 1, at 3,274,809 to 3,275,891
_14785
Position (kb)
3273
3274
3275 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.907 kb on - strand, within AO353_14775 at 3272.992 kb on - strand, within AO353_14775 at 3273.087 kb on - strand, within AO353_14775 at 3273.087 kb on - strand, within AO353_14775 at 3273.087 kb on - strand, within AO353_14775 at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.307 kb on - strand at 3273.324 kb on - strand at 3273.324 kb on - strand at 3273.367 kb on + strand at 3273.367 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.438 kb on + strand at 3273.438 kb on + strand at 3273.439 kb on - strand at 3273.449 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 3,272,532 - AO353_14775 0.55 -0.1 3,272,532 - AO353_14775 0.55 -0.5 3,272,532 - AO353_14775 0.55 -1.1 3,272,532 - AO353_14775 0.55 -0.5 3,272,532 - AO353_14775 0.55 -1.1 3,272,532 - AO353_14775 0.55 -1.2 3,272,532 - AO353_14775 0.55 -1.1 3,272,532 - AO353_14775 0.55 -0.3 3,272,532 - AO353_14775 0.55 -0.5 3,272,889 - AO353_14775 0.76 -0.7 3,272,889 - AO353_14775 0.76 -0.8 3,272,889 - AO353_14775 0.76 -2.5 3,272,889 - AO353_14775 0.76 -1.9 3,272,889 - AO353_14775 0.76 -0.6 3,272,889 - AO353_14775 0.76 -1.4 3,272,907 - AO353_14775 0.77 +0.4 3,272,992 - AO353_14775 0.82 -2.5 3,273,087 - AO353_14775 0.87 -1.2 3,273,087 - AO353_14775 0.87 -2.0 3,273,087 - AO353_14775 0.87 -1.9 3,273,301 - -1.8 3,273,301 - -0.9 3,273,301 - -1.3 3,273,301 - -1.1 3,273,301 - -0.6 3,273,301 - -1.0 3,273,301 - -1.3 3,273,301 - -0.9 3,273,301 - -2.2 3,273,301 - -0.3 3,273,301 - -1.4 3,273,307 - +0.4 3,273,324 - +1.7 3,273,324 - -1.1 3,273,367 + +1.1 3,273,367 + -2.2 3,273,423 + -1.4 3,273,423 + -0.3 3,273,423 + +0.1 3,273,423 + -2.1 3,273,423 + +1.3 3,273,423 + +0.4 3,273,423 + -0.5 3,273,423 + -1.3 3,273,425 + -0.3 3,273,425 + -1.4 3,273,425 + -0.5 3,273,425 + -1.0 3,273,425 + -0.5 3,273,425 + +0.1 3,273,425 + -1.5 3,273,425 + -0.9 3,273,425 + +1.7 3,273,425 + -0.4 3,273,425 + -1.9 3,273,425 + -0.8 3,273,425 + +0.5 3,273,425 + -1.4 3,273,426 - +2.0 3,273,426 - +0.2 3,273,426 - +1.8 3,273,426 - +1.3 3,273,426 - +0.2 3,273,426 - +0.0 3,273,427 + -0.3 3,273,427 + -0.8 3,273,427 + -0.5 3,273,427 + -1.8 3,273,427 + -2.4 3,273,427 + +0.4 3,273,427 + -1.8 3,273,427 + -1.1 3,273,427 + +0.1 3,273,427 + -2.2 3,273,427 + -1.3 3,273,427 + -1.0 3,273,427 + -1.2 3,273,427 + -0.5 3,273,427 + -1.4 3,273,427 + +0.1 3,273,427 + -0.1 3,273,427 + -1.4 3,273,427 + -1.7 3,273,427 + -0.4 3,273,427 + -1.2 3,273,427 + -1.6 3,273,427 + -1.6 3,273,427 + -1.1 3,273,427 + -1.9 3,273,427 + -0.8 3,273,428 - +1.2 3,273,428 - +0.8 3,273,428 - +0.2 3,273,428 - +0.8 3,273,428 - +0.9 3,273,428 - +0.5 3,273,428 - +1.1 3,273,428 - +1.4 3,273,428 - -0.0 3,273,428 - +1.1 3,273,428 - -0.1 3,273,428 - +1.7 3,273,428 - +1.3 3,273,438 + +0.7 3,273,438 + -1.1 3,273,439 - +0.3 3,273,449 + -1.9
Or see this region's nucleotide sequence