Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14780

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_14775 and AO353_14780 are separated by 216 nucleotidesAO353_14780 and AO353_14785 overlap by 4 nucleotides AO353_14775: AO353_14775 - hypothetical protein, at 3,271,582 to 3,273,306 _14775 AO353_14780: AO353_14780 - glutamyl-tRNA reductase, at 3,273,523 to 3,274,812 _14780 AO353_14785: AO353_14785 - peptide chain release factor 1, at 3,274,809 to 3,275,891 _14785 Position (kb) 3273 3274 3275Strain fitness (log2 ratio) -2 -1 0 1 2at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.907 kb on - strand, within AO353_14775at 3272.992 kb on - strand, within AO353_14775at 3273.087 kb on - strand, within AO353_14775at 3273.087 kb on - strand, within AO353_14775at 3273.087 kb on - strand, within AO353_14775at 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.307 kb on - strandat 3273.324 kb on - strandat 3273.324 kb on - strandat 3273.367 kb on + strandat 3273.367 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.438 kb on + strandat 3273.438 kb on + strandat 3273.439 kb on - strandat 3273.449 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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3,272,532 - AO353_14775 0.55 -0.1
3,272,532 - AO353_14775 0.55 -0.5
3,272,532 - AO353_14775 0.55 -1.1
3,272,532 - AO353_14775 0.55 -0.5
3,272,532 - AO353_14775 0.55 -1.1
3,272,532 - AO353_14775 0.55 -1.2
3,272,532 - AO353_14775 0.55 -1.1
3,272,532 - AO353_14775 0.55 -0.3
3,272,532 - AO353_14775 0.55 -0.5
3,272,889 - AO353_14775 0.76 -0.7
3,272,889 - AO353_14775 0.76 -0.8
3,272,889 - AO353_14775 0.76 -2.5
3,272,889 - AO353_14775 0.76 -1.9
3,272,889 - AO353_14775 0.76 -0.6
3,272,889 - AO353_14775 0.76 -1.4
3,272,907 - AO353_14775 0.77 +0.4
3,272,992 - AO353_14775 0.82 -2.5
3,273,087 - AO353_14775 0.87 -1.2
3,273,087 - AO353_14775 0.87 -2.0
3,273,087 - AO353_14775 0.87 -1.9
3,273,301 - -1.8
3,273,301 - -0.9
3,273,301 - -1.3
3,273,301 - -1.1
3,273,301 - -0.6
3,273,301 - -1.0
3,273,301 - -1.3
3,273,301 - -0.9
3,273,301 - -2.2
3,273,301 - -0.3
3,273,301 - -1.4
3,273,307 - +0.4
3,273,324 - +1.7
3,273,324 - -1.1
3,273,367 + +1.1
3,273,367 + -2.2
3,273,423 + -1.4
3,273,423 + -0.3
3,273,423 + +0.1
3,273,423 + -2.1
3,273,423 + +1.3
3,273,423 + +0.4
3,273,423 + -0.5
3,273,423 + -1.3
3,273,425 + -0.3
3,273,425 + -1.4
3,273,425 + -0.5
3,273,425 + -1.0
3,273,425 + -0.5
3,273,425 + +0.1
3,273,425 + -1.5
3,273,425 + -0.9
3,273,425 + +1.7
3,273,425 + -0.4
3,273,425 + -1.9
3,273,425 + -0.8
3,273,425 + +0.5
3,273,425 + -1.4
3,273,426 - +2.0
3,273,426 - +0.2
3,273,426 - +1.8
3,273,426 - +1.3
3,273,426 - +0.2
3,273,426 - +0.0
3,273,427 + -0.3
3,273,427 + -0.8
3,273,427 + -0.5
3,273,427 + -1.8
3,273,427 + -2.4
3,273,427 + +0.4
3,273,427 + -1.8
3,273,427 + -1.1
3,273,427 + +0.1
3,273,427 + -2.2
3,273,427 + -1.3
3,273,427 + -1.0
3,273,427 + -1.2
3,273,427 + -0.5
3,273,427 + -1.4
3,273,427 + +0.1
3,273,427 + -0.1
3,273,427 + -1.4
3,273,427 + -1.7
3,273,427 + -0.4
3,273,427 + -1.2
3,273,427 + -1.6
3,273,427 + -1.6
3,273,427 + -1.1
3,273,427 + -1.9
3,273,427 + -0.8
3,273,428 - +1.2
3,273,428 - +0.8
3,273,428 - +0.2
3,273,428 - +0.8
3,273,428 - +0.9
3,273,428 - +0.5
3,273,428 - +1.1
3,273,428 - +1.4
3,273,428 - -0.0
3,273,428 - +1.1
3,273,428 - -0.1
3,273,428 - +1.7
3,273,428 - +1.3
3,273,438 + +0.7
3,273,438 + -1.1
3,273,439 - +0.3
3,273,449 + -1.9

Or see this region's nucleotide sequence