Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04725 and AO353_04730 are separated by 14 nucleotides AO353_04730 and AO353_04735 are separated by 309 nucleotides
AO353_04725: AO353_04725 - alginate O-acetyltransferase, at 1,022,986 to 1,024,161
_04725
AO353_04730: AO353_04730 - alginate O-acetyltransferase, at 1,024,176 to 1,024,829
_04730
AO353_04735: AO353_04735 - mannose-1-phosphate guanylyltransferase, at 1,025,139 to 1,026,590
_04735
Position (kb)
1024
1025 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1023.227 kb on + strand, within AO353_04725 at 1023.227 kb on + strand, within AO353_04725 at 1023.228 kb on - strand, within AO353_04725 at 1023.228 kb on - strand, within AO353_04725 at 1023.228 kb on - strand, within AO353_04725 at 1023.253 kb on + strand, within AO353_04725 at 1023.253 kb on + strand, within AO353_04725 at 1023.253 kb on + strand, within AO353_04725 at 1023.253 kb on + strand, within AO353_04725 at 1023.254 kb on - strand, within AO353_04725 at 1023.254 kb on - strand, within AO353_04725 at 1023.254 kb on - strand, within AO353_04725 at 1023.254 kb on - strand, within AO353_04725 at 1023.254 kb on - strand, within AO353_04725 at 1023.254 kb on - strand, within AO353_04725 at 1023.254 kb on - strand, within AO353_04725 at 1023.310 kb on + strand, within AO353_04725 at 1023.310 kb on + strand, within AO353_04725 at 1023.310 kb on + strand, within AO353_04725 at 1023.310 kb on + strand, within AO353_04725 at 1023.311 kb on - strand, within AO353_04725 at 1023.311 kb on - strand, within AO353_04725 at 1023.448 kb on + strand, within AO353_04725 at 1023.448 kb on + strand, within AO353_04725 at 1023.448 kb on + strand, within AO353_04725 at 1023.828 kb on - strand, within AO353_04725 at 1023.853 kb on + strand, within AO353_04725 at 1023.853 kb on + strand, within AO353_04725 at 1023.853 kb on + strand, within AO353_04725 at 1023.854 kb on - strand, within AO353_04725 at 1023.854 kb on - strand, within AO353_04725 at 1023.854 kb on - strand, within AO353_04725 at 1023.854 kb on - strand, within AO353_04725 at 1023.854 kb on - strand, within AO353_04725 at 1023.923 kb on - strand, within AO353_04725 at 1023.923 kb on - strand, within AO353_04725 at 1023.923 kb on - strand, within AO353_04725 at 1023.964 kb on + strand, within AO353_04725 at 1024.030 kb on + strand, within AO353_04725 at 1024.030 kb on + strand, within AO353_04725 at 1024.030 kb on + strand, within AO353_04725 at 1024.030 kb on + strand, within AO353_04725 at 1024.031 kb on - strand, within AO353_04725 at 1024.031 kb on - strand, within AO353_04725 at 1024.031 kb on - strand, within AO353_04725 at 1024.031 kb on - strand, within AO353_04725 at 1024.115 kb on + strand at 1024.115 kb on + strand at 1024.116 kb on - strand at 1024.116 kb on - strand at 1024.116 kb on - strand at 1024.116 kb on - strand at 1024.122 kb on + strand at 1024.168 kb on + strand at 1024.169 kb on - strand at 1024.169 kb on - strand at 1024.169 kb on - strand at 1024.175 kb on + strand at 1024.175 kb on + strand at 1024.175 kb on + strand at 1024.175 kb on + strand at 1024.176 kb on - strand at 1024.176 kb on - strand at 1024.187 kb on + strand at 1024.187 kb on + strand at 1024.187 kb on + strand at 1024.188 kb on - strand at 1024.225 kb on + strand at 1024.232 kb on + strand at 1024.278 kb on + strand, within AO353_04730 at 1024.279 kb on - strand, within AO353_04730 at 1024.321 kb on - strand, within AO353_04730 at 1024.321 kb on - strand, within AO353_04730 at 1024.321 kb on - strand, within AO353_04730 at 1024.321 kb on - strand, within AO353_04730 at 1024.321 kb on - strand, within AO353_04730 at 1024.321 kb on - strand, within AO353_04730 at 1024.321 kb on - strand, within AO353_04730 at 1024.331 kb on + strand, within AO353_04730 at 1024.425 kb on + strand, within AO353_04730 at 1024.426 kb on - strand, within AO353_04730 at 1024.479 kb on + strand, within AO353_04730 at 1024.479 kb on + strand, within AO353_04730 at 1024.480 kb on - strand, within AO353_04730 at 1024.482 kb on + strand, within AO353_04730 at 1024.482 kb on + strand, within AO353_04730 at 1024.482 kb on + strand, within AO353_04730 at 1024.482 kb on + strand, within AO353_04730 at 1024.482 kb on + strand, within AO353_04730 at 1024.482 kb on + strand, within AO353_04730 at 1024.483 kb on - strand, within AO353_04730 at 1024.483 kb on - strand, within AO353_04730 at 1024.483 kb on - strand, within AO353_04730 at 1024.483 kb on - strand, within AO353_04730 at 1024.483 kb on - strand, within AO353_04730 at 1024.483 kb on - strand, within AO353_04730 at 1024.483 kb on - strand, within AO353_04730 at 1024.483 kb on - strand, within AO353_04730 at 1024.764 kb on + strand at 1024.764 kb on + strand at 1024.764 kb on + strand at 1024.764 kb on + strand at 1024.764 kb on + strand at 1024.805 kb on - strand at 1024.861 kb on + strand at 1024.861 kb on + strand at 1024.862 kb on - strand at 1024.862 kb on - strand at 1024.862 kb on - strand at 1024.862 kb on - strand at 1024.862 kb on - strand at 1024.862 kb on - strand at 1024.862 kb on - strand at 1024.866 kb on - strand at 1024.882 kb on + strand at 1024.882 kb on + strand at 1024.882 kb on + strand at 1024.882 kb on + strand at 1024.883 kb on - strand at 1024.883 kb on - strand at 1024.883 kb on - strand at 1024.883 kb on - strand at 1024.883 kb on - strand at 1024.883 kb on - strand at 1024.883 kb on - strand at 1024.976 kb on - strand at 1024.976 kb on - strand at 1024.984 kb on + strand at 1024.984 kb on + strand at 1024.984 kb on + strand at 1024.985 kb on - strand at 1024.985 kb on - strand at 1024.985 kb on - strand at 1025.072 kb on + strand at 1025.072 kb on + strand at 1025.072 kb on + strand at 1025.072 kb on + strand at 1025.073 kb on - strand at 1025.073 kb on - strand at 1025.073 kb on - strand at 1025.073 kb on - strand at 1025.073 kb on - strand at 1025.109 kb on - strand at 1025.109 kb on - strand at 1025.132 kb on + strand at 1025.132 kb on + strand at 1025.133 kb on - strand at 1025.133 kb on - strand at 1025.479 kb on + strand, within AO353_04735 at 1025.479 kb on + strand, within AO353_04735 at 1025.479 kb on + strand, within AO353_04735 at 1025.479 kb on + strand, within AO353_04735 at 1025.479 kb on + strand, within AO353_04735 at 1025.522 kb on + strand, within AO353_04735 at 1025.595 kb on + strand, within AO353_04735 at 1025.596 kb on - strand, within AO353_04735 at 1025.596 kb on - strand, within AO353_04735 at 1025.596 kb on - strand, within AO353_04735 at 1025.597 kb on + strand, within AO353_04735 at 1025.597 kb on + strand, within AO353_04735 at 1025.597 kb on + strand, within AO353_04735 at 1025.597 kb on + strand, within AO353_04735 at 1025.598 kb on - strand, within AO353_04735 at 1025.598 kb on - strand, within AO353_04735 at 1025.707 kb on - strand, within AO353_04735 at 1025.784 kb on + strand, within AO353_04735 at 1025.784 kb on + strand, within AO353_04735 at 1025.784 kb on + strand, within AO353_04735 at 1025.784 kb on + strand, within AO353_04735 at 1025.784 kb on + strand, within AO353_04735 at 1025.784 kb on + strand, within AO353_04735 at 1025.784 kb on + strand, within AO353_04735 at 1025.784 kb on + strand, within AO353_04735 at 1025.784 kb on + strand, within AO353_04735 at 1025.785 kb on - strand, within AO353_04735 at 1025.785 kb on - strand, within AO353_04735 at 1025.785 kb on - strand, within AO353_04735 at 1025.785 kb on - strand, within AO353_04735 at 1025.785 kb on - strand, within AO353_04735 at 1025.785 kb on - strand, within AO353_04735 at 1025.785 kb on - strand, within AO353_04735 at 1025.813 kb on + strand, within AO353_04735
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 1,023,227 + AO353_04725 0.20 -1.9 1,023,227 + AO353_04725 0.20 +0.4 1,023,228 - AO353_04725 0.21 -0.2 1,023,228 - AO353_04725 0.21 -1.3 1,023,228 - AO353_04725 0.21 -1.0 1,023,253 + AO353_04725 0.23 -0.9 1,023,253 + AO353_04725 0.23 -1.1 1,023,253 + AO353_04725 0.23 -0.6 1,023,253 + AO353_04725 0.23 +1.4 1,023,254 - AO353_04725 0.23 +1.0 1,023,254 - AO353_04725 0.23 -0.2 1,023,254 - AO353_04725 0.23 -0.6 1,023,254 - AO353_04725 0.23 +1.2 1,023,254 - AO353_04725 0.23 +0.3 1,023,254 - AO353_04725 0.23 +1.2 1,023,254 - AO353_04725 0.23 -0.4 1,023,310 + AO353_04725 0.28 +0.8 1,023,310 + AO353_04725 0.28 -0.7 1,023,310 + AO353_04725 0.28 -0.3 1,023,310 + AO353_04725 0.28 +1.2 1,023,311 - AO353_04725 0.28 +0.4 1,023,311 - AO353_04725 0.28 -0.2 1,023,448 + AO353_04725 0.39 +1.4 1,023,448 + AO353_04725 0.39 -0.5 1,023,448 + AO353_04725 0.39 -0.5 1,023,828 - AO353_04725 0.72 -0.2 1,023,853 + AO353_04725 0.74 -0.5 1,023,853 + AO353_04725 0.74 +1.0 1,023,853 + AO353_04725 0.74 -0.0 1,023,854 - AO353_04725 0.74 -0.7 1,023,854 - AO353_04725 0.74 -0.1 1,023,854 - AO353_04725 0.74 +0.4 1,023,854 - AO353_04725 0.74 +0.4 1,023,854 - AO353_04725 0.74 +1.5 1,023,923 - AO353_04725 0.80 -0.2 1,023,923 - AO353_04725 0.80 -1.3 1,023,923 - AO353_04725 0.80 -0.2 1,023,964 + AO353_04725 0.83 -1.2 1,024,030 + AO353_04725 0.89 +0.6 1,024,030 + AO353_04725 0.89 -1.4 1,024,030 + AO353_04725 0.89 +0.5 1,024,030 + AO353_04725 0.89 +0.3 1,024,031 - AO353_04725 0.89 +0.2 1,024,031 - AO353_04725 0.89 -0.2 1,024,031 - AO353_04725 0.89 -0.5 1,024,031 - AO353_04725 0.89 +0.1 1,024,115 + -0.4 1,024,115 + -1.2 1,024,116 - +1.1 1,024,116 - +0.6 1,024,116 - +0.1 1,024,116 - +1.1 1,024,122 + -2.1 1,024,168 + +0.8 1,024,169 - -0.2 1,024,169 - -0.1 1,024,169 - -0.2 1,024,175 + +0.1 1,024,175 + -0.9 1,024,175 + +0.3 1,024,175 + -1.7 1,024,176 - -0.7 1,024,176 - -2.1 1,024,187 + -0.4 1,024,187 + -0.7 1,024,187 + -0.9 1,024,188 - +0.5 1,024,225 + -1.1 1,024,232 + -0.0 1,024,278 + AO353_04730 0.16 +2.6 1,024,279 - AO353_04730 0.16 +0.6 1,024,321 - AO353_04730 0.22 +0.2 1,024,321 - AO353_04730 0.22 +0.8 1,024,321 - AO353_04730 0.22 -0.3 1,024,321 - AO353_04730 0.22 -1.8 1,024,321 - AO353_04730 0.22 +1.5 1,024,321 - AO353_04730 0.22 -0.7 1,024,321 - AO353_04730 0.22 +0.2 1,024,331 + AO353_04730 0.24 +0.1 1,024,425 + AO353_04730 0.38 -0.0 1,024,426 - AO353_04730 0.38 +1.1 1,024,479 + AO353_04730 0.46 +0.8 1,024,479 + AO353_04730 0.46 -0.3 1,024,480 - AO353_04730 0.46 -0.6 1,024,482 + AO353_04730 0.47 +1.0 1,024,482 + AO353_04730 0.47 +0.7 1,024,482 + AO353_04730 0.47 +0.1 1,024,482 + AO353_04730 0.47 +1.3 1,024,482 + AO353_04730 0.47 +1.4 1,024,482 + AO353_04730 0.47 -0.4 1,024,483 - AO353_04730 0.47 +1.3 1,024,483 - AO353_04730 0.47 -0.2 1,024,483 - AO353_04730 0.47 -0.1 1,024,483 - AO353_04730 0.47 -0.3 1,024,483 - AO353_04730 0.47 +2.6 1,024,483 - AO353_04730 0.47 +0.9 1,024,483 - AO353_04730 0.47 -0.4 1,024,483 - AO353_04730 0.47 +0.1 1,024,764 + -0.9 1,024,764 + +1.6 1,024,764 + -1.6 1,024,764 + -0.7 1,024,764 + -1.2 1,024,805 - +0.3 1,024,861 + -1.0 1,024,861 + -0.1 1,024,862 - +0.8 1,024,862 - +0.1 1,024,862 - -0.4 1,024,862 - +0.6 1,024,862 - -1.0 1,024,862 - +0.6 1,024,862 - +0.1 1,024,866 - -0.6 1,024,882 + +0.3 1,024,882 + +1.2 1,024,882 + -1.9 1,024,882 + -1.5 1,024,883 - +0.1 1,024,883 - -0.5 1,024,883 - -1.8 1,024,883 - +0.3 1,024,883 - -0.7 1,024,883 - -0.0 1,024,883 - +1.0 1,024,976 - +0.7 1,024,976 - -1.1 1,024,984 + -1.8 1,024,984 + -1.1 1,024,984 + -0.7 1,024,985 - -0.9 1,024,985 - -0.4 1,024,985 - +0.4 1,025,072 + +0.5 1,025,072 + +1.3 1,025,072 + -0.6 1,025,072 + +0.8 1,025,073 - -1.3 1,025,073 - +0.1 1,025,073 - +0.7 1,025,073 - +0.2 1,025,073 - -0.9 1,025,109 - -2.8 1,025,109 - +0.3 1,025,132 + -0.9 1,025,132 + -1.3 1,025,133 - -0.1 1,025,133 - +1.0 1,025,479 + AO353_04735 0.23 -0.4 1,025,479 + AO353_04735 0.23 -0.6 1,025,479 + AO353_04735 0.23 -0.1 1,025,479 + AO353_04735 0.23 +0.4 1,025,479 + AO353_04735 0.23 +0.3 1,025,522 + AO353_04735 0.26 +0.3 1,025,595 + AO353_04735 0.31 +0.6 1,025,596 - AO353_04735 0.31 -0.4 1,025,596 - AO353_04735 0.31 +0.8 1,025,596 - AO353_04735 0.31 -0.3 1,025,597 + AO353_04735 0.32 +1.3 1,025,597 + AO353_04735 0.32 +1.0 1,025,597 + AO353_04735 0.32 +0.3 1,025,597 + AO353_04735 0.32 +0.3 1,025,598 - AO353_04735 0.32 +0.8 1,025,598 - AO353_04735 0.32 -0.1 1,025,707 - AO353_04735 0.39 +0.5 1,025,784 + AO353_04735 0.44 +0.5 1,025,784 + AO353_04735 0.44 +0.2 1,025,784 + AO353_04735 0.44 -0.2 1,025,784 + AO353_04735 0.44 -0.3 1,025,784 + AO353_04735 0.44 -0.8 1,025,784 + AO353_04735 0.44 +0.4 1,025,784 + AO353_04735 0.44 +0.4 1,025,784 + AO353_04735 0.44 -1.1 1,025,784 + AO353_04735 0.44 +1.6 1,025,785 - AO353_04735 0.44 -0.4 1,025,785 - AO353_04735 0.44 -1.7 1,025,785 - AO353_04735 0.44 +0.7 1,025,785 - AO353_04735 0.44 +0.3 1,025,785 - AO353_04735 0.44 -1.7 1,025,785 - AO353_04735 0.44 -0.5 1,025,785 - AO353_04735 0.44 +0.1 1,025,813 + AO353_04735 0.46 -0.3
Or see this region's nucleotide sequence