Strain Fitness in Pantoea sp. MT58 around IAI47_16725

Experiment: copper (II) chloride 2 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 uM, anaerobic
3,538,966	+		IAI47_16720	0.37	-0.2
3,539,092	-		IAI47_16720	0.46	+0.6
3,539,109	+		IAI47_16720	0.47	+1.0
3,539,109	+		IAI47_16720	0.47	-1.9
3,539,109	+		IAI47_16720	0.47	+0.6
3,539,110	-		IAI47_16720	0.47	-0.5
3,539,110	-		IAI47_16720	0.47	-0.2
3,539,110	-		IAI47_16720	0.47	+0.3
3,539,145	+		IAI47_16720	0.49	-0.7
3,539,145	+		IAI47_16720	0.49	+1.0
3,539,145	+		IAI47_16720	0.49	+1.2
3,539,145	+		IAI47_16720	0.49	-0.5
3,539,146	-		IAI47_16720	0.49	-1.8
3,539,324	+		IAI47_16720	0.61	-0.5
3,539,324	+		IAI47_16720	0.61	+0.4
3,539,324	+		IAI47_16720	0.61	-2.4
3,539,324	+		IAI47_16720	0.61	+1.5
3,539,325	-		IAI47_16720	0.61	-0.2
3,539,325	-		IAI47_16720	0.61	-0.7
3,539,325	-		IAI47_16720	0.61	-0.8
3,539,325	-		IAI47_16720	0.61	+0.5
3,539,325	-		IAI47_16720	0.61	-0.2
3,539,325	-		IAI47_16720	0.61	-0.2
3,539,447	+		IAI47_16720	0.69	-1.6
3,539,447	+		IAI47_16720	0.69	+4.5
3,539,448	-		IAI47_16720	0.69	+0.0
3,539,448	-		IAI47_16720	0.69	+0.5
3,539,448	-		IAI47_16720	0.69	+4.0
3,539,599	+		IAI47_16720	0.79	+0.5
3,539,620	-		IAI47_16720	0.81	+2.7
3,539,620	-		IAI47_16720	0.81	+0.8
3,539,628	+		IAI47_16720	0.81	-0.7
3,539,628	+		IAI47_16720	0.81	+3.1
3,539,628	+		IAI47_16720	0.81	+1.0
3,539,628	+		IAI47_16720	0.81	+2.7
3,539,628	+		IAI47_16720	0.81	+1.1
3,539,628	+		IAI47_16720	0.81	-0.2
3,539,628	+		IAI47_16720	0.81	-1.4
3,539,628	+		IAI47_16720	0.81	+3.6
3,539,629	-		IAI47_16720	0.81	-0.3
3,539,629	-		IAI47_16720	0.81	+1.0
3,539,629	-		IAI47_16720	0.81	-1.2
3,539,629	-		IAI47_16720	0.81	+0.6
3,539,629	-		IAI47_16720	0.81	-1.0
3,539,629	-		IAI47_16720	0.81	-0.7
3,539,750	+		IAI47_16720	0.89	+1.3
3,539,752	+		IAI47_16720	0.89	-0.2
3,539,802	-				+1.6
3,539,875	+				+0.4
3,539,875	+				-0.4
3,539,876	-				-1.2
3,539,876	-				+1.4
3,539,924	+				+0.1
3,539,925	-				+3.3
3,539,925	-				+3.9
3,539,941	+				-0.6
3,539,941	+				-1.6
3,539,941	+				+0.1
3,539,942	-				-2.0
3,539,948	+				+0.0
3,539,949	-				+0.2
3,539,949	-				+0.6
3,539,949	-				+1.0
3,539,949	-				-0.0
3,539,949	-				-0.3
3,539,988	+				+0.7
3,539,988	+				+0.7
3,540,010	+				+4.9
3,540,010	+				+0.8
3,540,011	-				-0.8
3,540,142	+		IAI47_16725	0.16	-1.2
3,540,142	+		IAI47_16725	0.16	-0.4
3,540,142	+		IAI47_16725	0.16	-1.0
3,540,142	+		IAI47_16725	0.16	-0.9
3,540,143	-		IAI47_16725	0.16	-0.5
3,540,185	-		IAI47_16725	0.19	-0.5
3,540,229	+		IAI47_16725	0.23	-1.3
3,540,229	+		IAI47_16725	0.23	+1.3
3,540,229	+		IAI47_16725	0.23	+1.4
3,540,229	+		IAI47_16725	0.23	+0.5
3,540,230	-		IAI47_16725	0.23	+0.2
3,540,389	-		IAI47_16725	0.35	-0.3
3,540,389	-		IAI47_16725	0.35	-0.6
3,540,472	+		IAI47_16725	0.42	-1.1
3,540,473	-		IAI47_16725	0.42	+0.1
3,540,530	-		IAI47_16725	0.46	-0.3
3,540,550	+		IAI47_16725	0.48	+0.2
3,540,550	+		IAI47_16725	0.48	-0.7
3,540,551	-		IAI47_16725	0.48	-0.2
3,540,551	-		IAI47_16725	0.48	-1.3
3,540,746	-		IAI47_16725	0.63	-0.4
3,540,827	+		IAI47_16725	0.70	-1.2
3,540,827	+		IAI47_16725	0.70	-0.4
3,540,828	-		IAI47_16725	0.70	-0.8
3,540,909	+		IAI47_16725	0.76	-1.6
3,540,909	+		IAI47_16725	0.76	-0.1
3,540,910	-		IAI47_16725	0.76	-0.2
3,541,099	+				+1.6
3,541,169	+				-0.9
3,541,169	+				+0.4
3,541,169	+				-1.5
3,541,170	-				-0.2
3,541,170	-				-1.3
3,541,185	+				-0.5
3,541,185	+				-1.1
3,541,195	-				-0.5
3,541,245	+				+1.3
3,541,246	-				+0.5
3,541,246	-				+1.4
3,541,273	+				+0.3
3,541,274	-				+0.5
3,541,274	-				+0.7
3,541,319	+		IAI47_16730	0.10	-0.3
3,541,319	+		IAI47_16730	0.10	+0.2
3,541,350	+		IAI47_16730	0.14	-1.2
3,541,351	-		IAI47_16730	0.14	-0.3
3,541,519	+		IAI47_16730	0.32	+0.8
3,541,520	-		IAI47_16730	0.32	-1.2
3,541,520	-		IAI47_16730	0.32	+0.9
3,541,520	-		IAI47_16730	0.32	-1.0
3,541,520	-		IAI47_16730	0.32	+2.7
3,541,560	+		IAI47_16730	0.37	+1.5
3,541,561	-		IAI47_16730	0.37	+0.3
3,541,624	-		IAI47_16730	0.44	-0.5
3,541,644	-		IAI47_16730	0.46	-1.0
3,541,644	-		IAI47_16730	0.46	-0.7
3,541,654	-		IAI47_16730	0.47	-0.2
3,541,654	-		IAI47_16730	0.47	+1.0
3,541,661	+		IAI47_16730	0.48	+0.1
3,541,661	+		IAI47_16730	0.48	+0.5
3,541,662	-		IAI47_16730	0.48	+0.6
3,541,662	-		IAI47_16730	0.48	-0.7
3,541,684	+		IAI47_16730	0.50	-0.1
3,541,684	+		IAI47_16730	0.50	+1.3
3,541,685	-		IAI47_16730	0.50	-0.4
3,541,685	-		IAI47_16730	0.50	-1.0
3,541,719	+		IAI47_16730	0.54	+4.2
3,541,719	+		IAI47_16730	0.54	+1.5
3,541,720	-		IAI47_16730	0.54	-0.2
3,541,720	-		IAI47_16730	0.54	+0.2
3,541,774	+		IAI47_16730	0.60	+0.9
3,541,774	+		IAI47_16730	0.60	-0.1
3,541,795	-		IAI47_16730	0.63	-0.0
3,541,819	+		IAI47_16730	0.65	+0.2
3,541,819	+		IAI47_16730	0.65	-0.8
3,541,820	-		IAI47_16730	0.65	-0.5
3,541,820	-		IAI47_16730	0.65	-0.7
3,541,853	+		IAI47_16730	0.69	+0.9
3,541,853	+		IAI47_16730	0.69	-2.3
3,541,858	+		IAI47_16730	0.70	+2.0
3,541,859	-		IAI47_16730	0.70	+0.6
3,541,879	+		IAI47_16730	0.72	+1.3
3,541,880	-		IAI47_16730	0.72	-0.5
3,541,938	+		IAI47_16730	0.78	+1.4
3,541,938	+		IAI47_16730	0.78	-1.2
3,541,939	-		IAI47_16730	0.78	+1.2
3,541,939	-		IAI47_16730	0.78	-0.9
3,541,941	+		IAI47_16730	0.79	+1.0
3,541,941	+		IAI47_16730	0.79	+1.7
3,541,941	+		IAI47_16730	0.79	-0.5
3,541,941	+		IAI47_16730	0.79	-2.4
3,541,942	-		IAI47_16730	0.79	+0.9
3,541,942	-		IAI47_16730	0.79	-0.4
3,541,942	-		IAI47_16730	0.79	-1.9
3,541,942	-		IAI47_16730	0.79	-0.8
3,541,942	-		IAI47_16730	0.79	-1.2
3,542,026	+		IAI47_16730	0.88	+0.2
3,542,026	+		IAI47_16730	0.88	-0.6
3,542,156	+				-0.6
3,542,156	+				-0.1
3,542,158	+				-1.6
3,542,158	+				+2.6
3,542,180	-				+1.3
3,542,196	+				-2.0
3,542,197	-				+0.5
3,542,197	-				-0.3
3,542,200	+				+0.7
3,542,200	+				-0.4
3,542,200	+				+0.2
3,542,200	+				+0.2