Strain Fitness in Pantoea sp. MT58 around IAI47_11770

Experiment: copper (II) chloride 2 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 uM, anaerobic
2,495,545	-		IAI47_11760	0.85	-0.5
2,495,583	+		IAI47_11760	0.87	+0.0
2,495,865	+				+0.9
2,495,866	-				+0.2
2,495,874	-				-0.0
2,495,927	+				+0.0
2,495,934	-				+0.9
2,495,942	-				-0.1
2,495,942	-				+1.9
2,495,952	-				+0.6
2,496,007	-		IAI47_11765	0.30	+2.1
2,496,007	-		IAI47_11765	0.30	+0.2
2,496,007	-		IAI47_11765	0.30	+0.1
2,496,039	+		IAI47_11765	0.43	-0.4
2,496,039	+		IAI47_11765	0.43	+0.3
2,496,039	+		IAI47_11765	0.43	-0.0
2,496,039	+		IAI47_11765	0.43	-1.5
2,496,040	-		IAI47_11765	0.43	+0.3
2,496,040	-		IAI47_11765	0.43	+0.7
2,496,040	-		IAI47_11765	0.43	+0.2
2,496,040	-		IAI47_11765	0.43	+0.2
2,496,058	+		IAI47_11765	0.51	+1.0
2,496,058	+		IAI47_11765	0.51	-1.2
2,496,059	-		IAI47_11765	0.51	-0.2
2,496,070	-		IAI47_11765	0.55	+0.3
2,496,072	+		IAI47_11765	0.56	+7.4
2,496,073	-		IAI47_11765	0.57	+1.0
2,496,073	-		IAI47_11765	0.57	-0.1
2,496,079	+		IAI47_11765	0.59	-2.0
2,496,080	-		IAI47_11765	0.59	+0.7
2,496,111	+		IAI47_11765	0.72	-0.8
2,496,111	+		IAI47_11765	0.72	-0.7
2,496,112	-		IAI47_11765	0.72	-0.3
2,496,112	-		IAI47_11765	0.72	+0.1
2,496,121	-		IAI47_11765	0.76	+1.1
2,496,121	-		IAI47_11765	0.76	+0.1
2,496,139	-		IAI47_11765	0.83	-0.2
2,496,171	+				+2.0
2,496,171	+				-2.0
2,496,172	-				-0.2
2,496,172	-				+1.7
2,496,174	+				-0.8
2,496,175	-				+1.4
2,496,175	-				-1.9
2,496,199	+				+1.0
2,496,200	-				+0.0
2,496,245	+				+2.5
2,496,249	+				+0.2
2,496,249	+				-1.4
2,496,249	+				+0.7
2,496,249	+				+0.1
2,496,250	-				-0.1
2,496,252	-				+0.7
2,496,288	+				-1.3
2,496,288	+				-0.7
2,496,289	-				+0.3
2,496,289	-				-0.9
2,496,289	-				-0.1
2,496,289	-				+1.2
2,496,292	-				+1.0
2,496,360	+				+0.5
2,496,360	+				+0.6
2,496,360	+				-1.6
2,496,361	-				+1.4
2,496,364	+				-0.3
2,496,364	+				+0.2
2,496,364	+				-1.9
2,496,364	+				+0.0
2,496,364	+				+0.8
2,496,364	+				+0.9
2,496,365	-				-0.2
2,496,365	-				-0.5
2,496,365	-				+2.4
2,496,370	-				-0.8
2,496,414	+				-0.1
2,496,414	+				-0.4
2,496,414	+				-0.2
2,496,415	-				-0.9
2,496,415	-				-0.2
2,496,415	-				+1.5
2,496,415	-				-0.1
2,496,415	-				-0.1
2,496,415	-				-0.6
2,496,415	-				-0.1
2,496,419	-				-2.0
2,496,419	-				-0.8
2,496,481	+		IAI47_11770	0.12	-0.8
2,496,481	+		IAI47_11770	0.12	+0.6
2,496,563	+		IAI47_11770	0.24	+0.8
2,496,564	-		IAI47_11770	0.24	-0.2
2,496,564	-		IAI47_11770	0.24	-0.7
2,496,564	-		IAI47_11770	0.24	+0.8
2,496,566	+		IAI47_11770	0.24	-0.3
2,496,567	-		IAI47_11770	0.24	-0.4
2,496,582	+		IAI47_11770	0.26	+0.2
2,496,590	-		IAI47_11770	0.27	+2.2
2,496,608	+		IAI47_11770	0.30	+0.4
2,496,609	-		IAI47_11770	0.30	-0.6
2,496,804	-		IAI47_11770	0.56	-0.0
2,496,820	+		IAI47_11770	0.59	-0.7
2,496,820	+		IAI47_11770	0.59	-1.0
2,496,928	-		IAI47_11770	0.73	-1.2
2,496,963	-		IAI47_11770	0.78	-1.0
2,497,007	+		IAI47_11770	0.84	+0.7
2,497,007	+		IAI47_11770	0.84	+1.2
2,497,007	+		IAI47_11770	0.84	+0.6
2,497,007	+		IAI47_11770	0.84	-3.3
2,497,007	+		IAI47_11770	0.84	-2.0
2,497,007	+		IAI47_11770	0.84	-1.9
2,497,007	+		IAI47_11770	0.84	-0.1
2,497,008	-		IAI47_11770	0.84	-1.0
2,497,008	-		IAI47_11770	0.84	-1.6
2,497,008	-		IAI47_11770	0.84	+0.1
2,497,008	-		IAI47_11770	0.84	-0.7
2,497,073	+				+0.4
2,497,104	-				+0.8
2,497,123	-				+5.6
2,497,131	+				-0.1
2,497,131	+				+0.0
2,497,131	+				-1.3
2,497,132	-				-0.2
2,497,166	+				+2.0
2,497,166	+				-1.4
2,497,167	-				+0.2
2,497,167	-				-0.7
2,497,266	-				+1.4
2,497,308	-				-0.6
2,497,320	+				-1.3
2,497,320	+				+0.7
2,497,321	-				+0.7
2,497,327	+				+0.3
2,497,328	-				+0.5
2,497,330	+				+1.3
2,497,330	+				+1.9
2,497,330	+				+0.3
2,497,330	+				+1.3
2,497,330	+				-0.4
2,497,330	+				-1.1
2,497,330	+				-0.1
2,497,330	+				-0.1
2,497,331	-				-0.7
2,497,331	-				-1.1
2,497,331	-				+0.8
2,497,331	-				-0.2
2,497,331	-				-0.9
2,497,331	-				+0.0
2,497,331	-				-0.4
2,497,331	-				-2.5
2,497,349	+		IAI47_11775	0.11	+0.5
2,497,349	+		IAI47_11775	0.11	-0.2
2,497,349	+		IAI47_11775	0.11	-1.5
2,497,350	-		IAI47_11775	0.11	+1.0
2,497,371	+		IAI47_11775	0.13	+0.0
2,497,371	+		IAI47_11775	0.13	-0.5
2,497,371	+		IAI47_11775	0.13	+1.6
2,497,372	-		IAI47_11775	0.13	-0.5
2,497,372	-		IAI47_11775	0.13	-0.7
2,497,372	-		IAI47_11775	0.13	-0.6
2,497,373	+		IAI47_11775	0.13	-0.5
2,497,373	+		IAI47_11775	0.13	-0.1
2,497,374	-		IAI47_11775	0.14	+0.3
2,497,374	-		IAI47_11775	0.14	+0.9
2,497,417	+		IAI47_11775	0.17	+2.1
2,497,417	+		IAI47_11775	0.17	-0.4
2,497,417	+		IAI47_11775	0.17	+2.0
2,497,417	+		IAI47_11775	0.17	+0.7
2,497,418	-		IAI47_11775	0.17	+0.4
2,497,418	-		IAI47_11775	0.17	+0.5
2,497,418	-		IAI47_11775	0.17	+0.5
2,497,418	-		IAI47_11775	0.17	+1.6
2,497,418	-		IAI47_11775	0.17	-0.1
2,497,418	-		IAI47_11775	0.17	+0.4
2,497,559	-		IAI47_11775	0.30	-1.3
2,497,559	-		IAI47_11775	0.30	-0.4
2,497,616	+		IAI47_11775	0.35	-0.4
2,497,712	+		IAI47_11775	0.43	+0.1
2,497,712	+		IAI47_11775	0.43	+0.7
2,497,712	+		IAI47_11775	0.43	+0.1
2,497,712	+		IAI47_11775	0.43	-1.2
2,497,712	+		IAI47_11775	0.43	-1.1
2,497,712	+		IAI47_11775	0.43	-0.8
2,497,713	-		IAI47_11775	0.44	-0.4
2,497,713	-		IAI47_11775	0.44	+1.2
2,497,713	-		IAI47_11775	0.44	+0.8
2,497,713	-		IAI47_11775	0.44	+0.3
2,497,838	+		IAI47_11775	0.55	+0.6
2,497,853	+		IAI47_11775	0.56	-1.2
2,497,853	+		IAI47_11775	0.56	-2.0
2,497,853	+		IAI47_11775	0.56	-1.0
2,497,865	+		IAI47_11775	0.57	-0.3
2,497,865	+		IAI47_11775	0.57	-0.9
2,497,865	+		IAI47_11775	0.57	+0.6
2,497,865	+		IAI47_11775	0.57	-1.3
2,497,865	+		IAI47_11775	0.57	+1.8
2,497,865	+		IAI47_11775	0.57	-2.2
2,497,865	+		IAI47_11775	0.57	+0.1
2,497,866	-		IAI47_11775	0.57	+0.0
2,497,866	-		IAI47_11775	0.57	-1.4
2,497,866	-		IAI47_11775	0.57	+0.4
2,497,874	+		IAI47_11775	0.58	+1.9
2,497,874	+		IAI47_11775	0.58	+0.1
2,497,874	+		IAI47_11775	0.58	-1.4
2,497,874	+		IAI47_11775	0.58	-1.1
2,497,874	+		IAI47_11775	0.58	+3.0
2,497,874	+		IAI47_11775	0.58	-0.6
2,497,874	+		IAI47_11775	0.58	-0.1
2,497,874	+		IAI47_11775	0.58	-0.7
2,497,875	-		IAI47_11775	0.58	-1.6
2,497,875	-		IAI47_11775	0.58	+1.3
2,497,875	-		IAI47_11775	0.58	-0.5
2,497,875	-		IAI47_11775	0.58	-2.0
2,497,937	+		IAI47_11775	0.63	-0.8
2,497,938	+		IAI47_11775	0.63	-0.8
2,497,938	-		IAI47_11775	0.63	-0.2
2,497,938	-		IAI47_11775	0.63	+0.8
2,497,961	+		IAI47_11775	0.65	+0.4
2,497,961	+		IAI47_11775	0.65	-0.2
2,497,961	+		IAI47_11775	0.65	+0.1
2,497,962	-		IAI47_11775	0.66	-0.9
2,497,962	-		IAI47_11775	0.66	+1.5
2,497,962	-		IAI47_11775	0.66	-0.6
2,497,965	+		IAI47_11775	0.66	-0.6
2,497,965	+		IAI47_11775	0.66	+0.8
2,497,966	-		IAI47_11775	0.66	+0.2
2,497,966	-		IAI47_11775	0.66	+2.0
2,497,966	-		IAI47_11775	0.66	+1.6
2,497,966	-		IAI47_11775	0.66	-1.4
2,497,997	+		IAI47_11775	0.69	-1.8
2,497,997	+		IAI47_11775	0.69	+0.0
2,497,998	-		IAI47_11775	0.69	-1.1
2,497,998	-		IAI47_11775	0.69	+2.9
2,497,998	-		IAI47_11775	0.69	+1.0
2,497,998	-		IAI47_11775	0.69	-0.3
2,498,006	+		IAI47_11775	0.69	-0.3
2,498,013	+		IAI47_11775	0.70	-0.9
2,498,013	+		IAI47_11775	0.70	+0.9
2,498,013	+		IAI47_11775	0.70	-1.3
2,498,013	+		IAI47_11775	0.70	+0.0
2,498,014	-		IAI47_11775	0.70	-0.6
2,498,014	-		IAI47_11775	0.70	-0.8
2,498,014	-		IAI47_11775	0.70	+0.6
2,498,014	-		IAI47_11775	0.70	-1.4
2,498,014	-		IAI47_11775	0.70	-1.1
2,498,058	-		IAI47_11775	0.74	+0.2