Strain Fitness in Pantoea sp. MT58 around IAI47_06865

Experiment: copper (II) chloride 2 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 uM, anaerobic
1,433,732	+		IAI47_06860	0.34	+0.7
1,433,732	+		IAI47_06860	0.34	+1.9
1,433,782	+		IAI47_06860	0.37	-1.3
1,433,782	+		IAI47_06860	0.37	+0.5
1,433,783	-		IAI47_06860	0.37	+2.9
1,433,807	+		IAI47_06860	0.39	+0.1
1,433,816	+		IAI47_06860	0.40	+2.0
1,433,816	+		IAI47_06860	0.40	-1.2
1,433,816	+		IAI47_06860	0.40	+2.6
1,433,817	-		IAI47_06860	0.40	-1.0
1,433,817	-		IAI47_06860	0.40	-0.2
1,433,817	-		IAI47_06860	0.40	-0.1
1,433,849	+		IAI47_06860	0.42	+0.2
1,433,875	+		IAI47_06860	0.44	+2.3
1,433,876	-		IAI47_06860	0.44	+0.1
1,433,915	+		IAI47_06860	0.47	+0.9
1,433,915	+		IAI47_06860	0.47	+0.5
1,433,915	+		IAI47_06860	0.47	+1.4
1,433,916	-		IAI47_06860	0.47	+0.3
1,433,916	-		IAI47_06860	0.47	+0.1
1,433,934	+		IAI47_06860	0.48	-0.5
1,433,934	+		IAI47_06860	0.48	+1.1
1,433,934	+		IAI47_06860	0.48	-0.4
1,433,934	+		IAI47_06860	0.48	+0.4
1,433,934	+		IAI47_06860	0.48	+0.6
1,433,935	-		IAI47_06860	0.48	+0.6
1,433,935	-		IAI47_06860	0.48	-1.3
1,433,935	-		IAI47_06860	0.48	-0.4
1,433,935	-		IAI47_06860	0.48	-1.1
1,433,941	+		IAI47_06860	0.49	+0.9
1,433,941	+		IAI47_06860	0.49	+0.6
1,433,941	+		IAI47_06860	0.49	+1.2
1,433,941	+		IAI47_06860	0.49	+0.7
1,433,941	+		IAI47_06860	0.49	+0.2
1,434,100	+		IAI47_06860	0.60	+1.1
1,434,101	-		IAI47_06860	0.60	-1.2
1,434,101	-		IAI47_06860	0.60	+0.0
1,434,101	-		IAI47_06860	0.60	-0.8
1,434,101	-		IAI47_06860	0.60	+0.5
1,434,101	-		IAI47_06860	0.60	+0.9
1,434,184	+		IAI47_06860	0.66	+0.5
1,434,184	+		IAI47_06860	0.66	+1.0
1,434,185	-		IAI47_06860	0.66	-0.5
1,434,185	-		IAI47_06860	0.66	+2.0
1,434,185	-		IAI47_06860	0.66	-0.9
1,434,189	+		IAI47_06860	0.66	+2.5
1,434,189	+		IAI47_06860	0.66	+2.1
1,434,189	+		IAI47_06860	0.66	+0.9
1,434,189	+		IAI47_06860	0.66	+0.0
1,434,189	+		IAI47_06860	0.66	+3.5
1,434,189	+		IAI47_06860	0.66	+1.9
1,434,189	+		IAI47_06860	0.66	+2.8
1,434,189	+		IAI47_06860	0.66	+2.2
1,434,189	+		IAI47_06860	0.66	+0.9
1,434,189	+		IAI47_06860	0.66	+2.6
1,434,190	-		IAI47_06860	0.66	+0.3
1,434,190	-		IAI47_06860	0.66	+1.9
1,434,192	+		IAI47_06860	0.67	+1.4
1,434,193	-		IAI47_06860	0.67	+1.1
1,434,193	-		IAI47_06860	0.67	-1.6
1,434,266	+		IAI47_06860	0.72	+1.2
1,434,266	+		IAI47_06860	0.72	+0.0
1,434,266	+		IAI47_06860	0.72	+2.3
1,434,266	+		IAI47_06860	0.72	+1.0
1,434,266	+		IAI47_06860	0.72	+2.6
1,434,266	+		IAI47_06860	0.72	+0.9
1,434,266	+		IAI47_06860	0.72	+3.1
1,434,266	+		IAI47_06860	0.72	+0.9
1,434,266	+		IAI47_06860	0.72	+3.4
1,434,266	+		IAI47_06860	0.72	+0.3
1,434,266	+		IAI47_06860	0.72	+1.4
1,434,266	+		IAI47_06860	0.72	+3.5
1,434,266	+		IAI47_06860	0.72	+1.8
1,434,266	+		IAI47_06860	0.72	+1.0
1,434,266	+		IAI47_06860	0.72	+1.7
1,434,266	+		IAI47_06860	0.72	+1.6
1,434,267	-		IAI47_06860	0.72	-0.3
1,434,267	-		IAI47_06860	0.72	-0.3
1,434,267	-		IAI47_06860	0.72	+0.5
1,434,267	-		IAI47_06860	0.72	-0.8
1,434,267	-		IAI47_06860	0.72	-0.3
1,434,267	-		IAI47_06860	0.72	+1.0
1,434,267	-		IAI47_06860	0.72	-0.1
1,434,267	-		IAI47_06860	0.72	+2.7
1,434,267	-		IAI47_06860	0.72	+1.1
1,434,267	-		IAI47_06860	0.72	-0.1
1,434,267	-		IAI47_06860	0.72	-0.4
1,434,267	-		IAI47_06860	0.72	-0.3
1,434,267	-		IAI47_06860	0.72	+0.9
1,434,267	-		IAI47_06860	0.72	+4.8
1,434,267	-		IAI47_06860	0.72	-0.5
1,434,268	+		IAI47_06860	0.72	+0.9
1,434,268	+		IAI47_06860	0.72	+2.2
1,434,268	+		IAI47_06860	0.72	+1.3
1,434,268	+		IAI47_06860	0.72	+1.2
1,434,268	+		IAI47_06860	0.72	+1.6
1,434,268	+		IAI47_06860	0.72	+1.1
1,434,268	+		IAI47_06860	0.72	+1.0
1,434,268	+		IAI47_06860	0.72	+0.9
1,434,268	+		IAI47_06860	0.72	+0.9
1,434,268	+		IAI47_06860	0.72	+0.6
1,434,268	+		IAI47_06860	0.72	+2.1
1,434,268	+		IAI47_06860	0.72	-0.2
1,434,268	+		IAI47_06860	0.72	+1.9
1,434,268	+		IAI47_06860	0.72	+1.8
1,434,269	-		IAI47_06860	0.72	+4.5
1,434,269	-		IAI47_06860	0.72	+0.5
1,434,269	-		IAI47_06860	0.72	+1.2
1,434,269	-		IAI47_06860	0.72	+1.9
1,434,269	-		IAI47_06860	0.72	-0.3
1,434,269	-		IAI47_06860	0.72	-0.2
1,434,269	-		IAI47_06860	0.72	+4.4
1,434,269	-		IAI47_06860	0.72	-0.5
1,434,269	-		IAI47_06860	0.72	-0.5
1,434,269	-		IAI47_06860	0.72	+0.1
1,434,269	-		IAI47_06860	0.72	+1.1
1,434,269	-		IAI47_06860	0.72	-1.3
1,434,405	-		IAI47_06860	0.82	-0.1
1,434,484	-		IAI47_06860	0.87	-0.6
1,434,502	+		IAI47_06860	0.89	+0.3
1,434,502	+		IAI47_06860	0.89	+3.1
1,434,502	+		IAI47_06860	0.89	+1.8
1,434,502	+		IAI47_06860	0.89	+0.6
1,434,502	+		IAI47_06860	0.89	+1.9
1,434,502	+		IAI47_06860	0.89	+1.5
1,434,502	+		IAI47_06860	0.89	+2.4
1,434,503	-		IAI47_06860	0.89	+0.7
1,434,503	-		IAI47_06860	0.89	+0.7
1,434,503	-		IAI47_06860	0.89	-0.9
1,434,503	-		IAI47_06860	0.89	+1.3
1,434,503	-		IAI47_06860	0.89	-1.5
1,434,503	-		IAI47_06860	0.89	+0.5
1,434,505	+		IAI47_06860	0.89	+0.8
1,434,505	+		IAI47_06860	0.89	+2.7
1,434,505	+		IAI47_06860	0.89	+1.3
1,434,506	-		IAI47_06860	0.89	+0.5
1,434,506	-		IAI47_06860	0.89	-0.7
1,434,506	-		IAI47_06860	0.89	-0.9
1,434,506	-		IAI47_06860	0.89	-1.0
1,434,506	-		IAI47_06860	0.89	-1.1
1,434,506	-		IAI47_06860	0.89	+0.2
1,434,602	+				+0.3
1,434,602	+				-1.0
1,434,602	+				-0.9
1,434,602	+				+2.4
1,434,645	-				-1.0
1,434,645	-				-0.5
1,434,656	+				+3.2
1,434,657	-				+1.4
1,434,657	-				+1.6
1,434,676	-				-0.4
1,434,712	+				-0.4
1,434,775	+				+1.8
1,434,776	-				-1.5
1,434,776	-				+3.9
1,434,793	+				+0.7
1,434,793	+				+4.2
1,434,793	+				+0.3
1,434,793	+				+0.7
1,434,793	+				-0.2
1,434,794	-				-0.2
1,434,794	-				+0.9
1,434,794	-				+3.9
1,434,836	+				+2.0
1,434,836	+				-0.4
1,434,837	-				-1.7
1,434,926	+				+0.1
1,434,926	+				+1.3
1,434,926	+				+1.1
1,434,926	+				+0.1
1,434,926	+				+0.7
1,434,927	-				+0.3
1,434,927	-				+0.7
1,434,927	-				+1.2
1,434,927	-				+0.5
1,434,927	-				-0.9
1,434,927	-				-1.1
1,435,083	-		IAI47_06865	0.12	+1.1
1,435,142	+		IAI47_06865	0.14	+0.2
1,435,143	-		IAI47_06865	0.14	-1.9
1,435,143	-		IAI47_06865	0.14	-1.4
1,435,143	-		IAI47_06865	0.14	+0.8
1,435,168	+		IAI47_06865	0.15	+5.1
1,435,168	+		IAI47_06865	0.15	+0.2
1,435,169	-		IAI47_06865	0.15	-1.1
1,435,169	-		IAI47_06865	0.15	-0.0
1,435,169	-		IAI47_06865	0.15	-0.0
1,435,169	-		IAI47_06865	0.15	+0.3
1,435,169	-		IAI47_06865	0.15	-1.6
1,435,169	-		IAI47_06865	0.15	+1.7
1,435,169	-		IAI47_06865	0.15	-0.9
1,435,169	-		IAI47_06865	0.15	-0.6
1,435,169	-		IAI47_06865	0.15	+0.2
1,435,196	+		IAI47_06865	0.16	+0.9
1,435,197	-		IAI47_06865	0.16	+0.4
1,435,198	+		IAI47_06865	0.16	+0.7
1,435,198	+		IAI47_06865	0.16	+0.7
1,435,198	+		IAI47_06865	0.16	+1.4
1,435,198	+		IAI47_06865	0.16	+3.9
1,435,198	+		IAI47_06865	0.16	+0.5
1,435,199	-		IAI47_06865	0.16	+0.5
1,435,199	-		IAI47_06865	0.16	+0.9
1,435,199	-		IAI47_06865	0.16	-1.5
1,435,199	-		IAI47_06865	0.16	+0.1
1,435,469	+		IAI47_06865	0.24	-0.8
1,435,478	+		IAI47_06865	0.25	+0.3
1,435,482	+		IAI47_06865	0.25	-0.3
1,435,482	+		IAI47_06865	0.25	+2.8
1,435,482	+		IAI47_06865	0.25	-1.5
1,435,511	+		IAI47_06865	0.26	+0.2
1,435,511	+		IAI47_06865	0.26	+1.2
1,435,512	-		IAI47_06865	0.26	-1.3
1,435,552	+		IAI47_06865	0.27	+0.2
1,435,553	-		IAI47_06865	0.27	+1.1
1,435,553	-		IAI47_06865	0.27	+0.9
1,435,570	+		IAI47_06865	0.28	+0.8
1,435,570	+		IAI47_06865	0.28	+0.7
1,435,570	+		IAI47_06865	0.28	-1.4
1,435,574	+		IAI47_06865	0.28	-0.1
1,435,575	-		IAI47_06865	0.28	-0.7
1,435,575	-		IAI47_06865	0.28	-0.1
1,435,604	+		IAI47_06865	0.29	+1.6
1,435,633	+		IAI47_06865	0.30	-0.5
1,435,666	+		IAI47_06865	0.31	+2.5
1,435,666	+		IAI47_06865	0.31	+1.2
1,435,666	+		IAI47_06865	0.31	+0.6
1,435,691	+		IAI47_06865	0.32	+1.7
1,435,691	+		IAI47_06865	0.32	+2.2
1,435,801	+		IAI47_06865	0.35	-0.5
1,435,801	+		IAI47_06865	0.35	+2.8
1,435,801	+		IAI47_06865	0.35	-0.6
1,435,802	-		IAI47_06865	0.35	-2.3
1,435,802	-		IAI47_06865	0.35	+3.2
1,435,807	+		IAI47_06865	0.35	-0.0
1,435,807	+		IAI47_06865	0.35	+4.5
1,435,808	-		IAI47_06865	0.36	-1.6
1,435,808	-		IAI47_06865	0.36	+2.5
1,435,808	-		IAI47_06865	0.36	-1.2
1,435,862	-		IAI47_06865	0.37	-0.6
1,435,893	-		IAI47_06865	0.38	-1.1
1,435,893	-		IAI47_06865	0.38	-1.4
1,435,932	-		IAI47_06865	0.40	-0.1
1,435,932	-		IAI47_06865	0.40	-0.4
1,435,958	+		IAI47_06865	0.40	-0.5
1,435,958	+		IAI47_06865	0.40	-0.6
1,435,958	+		IAI47_06865	0.40	-0.2
1,435,958	+		IAI47_06865	0.40	+5.4
1,435,959	-		IAI47_06865	0.40	+0.2
1,435,959	-		IAI47_06865	0.40	+0.1
1,435,994	+		IAI47_06865	0.42	-0.3
1,436,099	+		IAI47_06865	0.45	-0.6
1,436,099	+		IAI47_06865	0.45	+2.1
1,436,100	-		IAI47_06865	0.45	+0.2
1,436,135	+		IAI47_06865	0.46	+0.7
1,436,160	+		IAI47_06865	0.47	+0.0
1,436,232	-		IAI47_06865	0.49	+0.5
1,436,326	+		IAI47_06865	0.52	-1.7
1,436,327	-		IAI47_06865	0.52	-0.5
1,436,360	+		IAI47_06865	0.53	-1.9
1,436,360	+		IAI47_06865	0.53	+1.6
1,436,360	+		IAI47_06865	0.53	+0.1
1,436,361	-		IAI47_06865	0.54	+0.8
1,436,361	-		IAI47_06865	0.54	-1.6
1,436,361	-		IAI47_06865	0.54	-1.0
1,436,361	-		IAI47_06865	0.54	-0.1
1,436,373	-		IAI47_06865	0.54	+0.4
1,436,373	-		IAI47_06865	0.54	+1.4
1,436,393	+		IAI47_06865	0.55	+0.9
1,436,394	-		IAI47_06865	0.55	-0.1
1,436,394	-		IAI47_06865	0.55	+4.0
1,436,633	+		IAI47_06865	0.62	-1.2
1,436,634	-		IAI47_06865	0.62	+1.7
1,436,634	-		IAI47_06865	0.62	-1.0
1,436,656	+		IAI47_06865	0.63	+1.2
1,436,656	+		IAI47_06865	0.63	+1.0
1,436,656	+		IAI47_06865	0.63	-0.7
1,436,656	+		IAI47_06865	0.63	-0.3
1,436,656	+		IAI47_06865	0.63	+0.5
1,436,657	-		IAI47_06865	0.63	+0.7
1,436,657	-		IAI47_06865	0.63	+1.7
1,436,657	-		IAI47_06865	0.63	+1.2
1,436,657	-		IAI47_06865	0.63	-1.2
1,436,657	-		IAI47_06865	0.63	+1.1
1,436,772	-		IAI47_06865	0.67	+2.7
1,436,903	+		IAI47_06865	0.71	+0.8
1,436,904	-		IAI47_06865	0.71	-0.1
1,436,957	+		IAI47_06865	0.73	+1.3
1,436,958	-		IAI47_06865	0.73	-0.9
1,436,996	-		IAI47_06865	0.74	+1.9
1,437,004	-		IAI47_06865	0.74	-1.2
1,437,046	+		IAI47_06865	0.76	+0.1
1,437,046	+		IAI47_06865	0.76	+0.6
1,437,046	+		IAI47_06865	0.76	-0.1
1,437,046	+		IAI47_06865	0.76	+1.3
1,437,046	+		IAI47_06865	0.76	+2.0
1,437,046	+		IAI47_06865	0.76	+0.5
1,437,047	-		IAI47_06865	0.76	+1.2
1,437,047	-		IAI47_06865	0.76	+1.0
1,437,047	-		IAI47_06865	0.76	-1.6
1,437,047	-		IAI47_06865	0.76	-0.1
1,437,047	-		IAI47_06865	0.76	-1.5
1,437,047	-		IAI47_06865	0.76	+0.6
1,437,168	-		IAI47_06865	0.80	-1.3
1,437,168	-		IAI47_06865	0.80	-0.0
1,437,168	-		IAI47_06865	0.80	-0.9
1,437,319	+		IAI47_06865	0.85	+0.6
1,437,319	+		IAI47_06865	0.85	+0.9
1,437,319	+		IAI47_06865	0.85	+0.5
1,437,319	+		IAI47_06865	0.85	+5.9
1,437,319	+		IAI47_06865	0.85	-0.4
1,437,320	-		IAI47_06865	0.85	+0.7
1,437,320	-		IAI47_06865	0.85	-0.3
1,437,320	-		IAI47_06865	0.85	+1.6
1,437,320	-		IAI47_06865	0.85	-0.2
1,437,325	+		IAI47_06865	0.85	-0.1
1,437,325	+		IAI47_06865	0.85	+1.7
1,437,326	-		IAI47_06865	0.85	-0.2
1,437,326	-		IAI47_06865	0.85	-1.5
1,437,343	+		IAI47_06865	0.85	+0.1
1,437,343	+		IAI47_06865	0.85	+0.5
1,437,343	+		IAI47_06865	0.85	-0.2
1,437,343	+		IAI47_06865	0.85	+0.4
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