Strain Fitness in Pantoea sp. MT58 around IAI47_06025

Experiment: copper (II) chloride 2 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 uM, anaerobic
1,228,206	+		IAI47_06015	0.75	-0.6
1,228,206	+		IAI47_06015	0.75	-0.1
1,228,206	+		IAI47_06015	0.75	+1.5
1,228,207	-		IAI47_06015	0.75	-1.6
1,228,207	-		IAI47_06015	0.75	+5.5
1,228,207	-		IAI47_06015	0.75	+1.6
1,228,207	-		IAI47_06015	0.75	+1.4
1,228,208	+		IAI47_06015	0.75	+0.7
1,228,208	+		IAI47_06015	0.75	-0.0
1,228,208	+		IAI47_06015	0.75	-0.6
1,228,208	+		IAI47_06015	0.75	-0.9
1,228,208	+		IAI47_06015	0.75	-1.6
1,228,208	+		IAI47_06015	0.75	+2.4
1,228,208	+		IAI47_06015	0.75	-0.6
1,228,208	+		IAI47_06015	0.75	+2.3
1,228,208	+		IAI47_06015	0.75	+1.7
1,228,209	-		IAI47_06015	0.75	+0.9
1,228,209	-		IAI47_06015	0.75	-0.8
1,228,209	-		IAI47_06015	0.75	-0.7
1,228,209	-		IAI47_06015	0.75	-0.7
1,228,209	-		IAI47_06015	0.75	-1.4
1,228,209	-		IAI47_06015	0.75	+0.8
1,228,209	-		IAI47_06015	0.75	-0.9
1,228,209	-		IAI47_06015	0.75	-0.3
1,228,209	-		IAI47_06015	0.75	+0.3
1,228,209	-		IAI47_06015	0.75	-0.1
1,228,209	-		IAI47_06015	0.75	-2.5
1,228,209	-		IAI47_06015	0.75	-0.4
1,228,209	-		IAI47_06015	0.75	+4.5
1,228,209	-		IAI47_06015	0.75	+6.4
1,228,218	+		IAI47_06015	0.76	+1.5
1,228,219	-		IAI47_06015	0.76	-1.5
1,228,266	+		IAI47_06015	0.80	-0.4
1,228,267	-		IAI47_06015	0.80	-1.9
1,228,267	-		IAI47_06015	0.80	-0.7
1,228,267	-		IAI47_06015	0.80	+0.6
1,228,286	+		IAI47_06015	0.81	+5.0
1,228,292	-		IAI47_06015	0.82	-1.0
1,228,292	-		IAI47_06015	0.82	-0.8
1,228,323	+		IAI47_06015	0.85	+0.2
1,228,324	-		IAI47_06015	0.85	-1.6
1,228,334	+		IAI47_06015	0.85	-1.7
1,228,334	+		IAI47_06015	0.85	-0.7
1,228,334	+		IAI47_06015	0.85	-0.5
1,228,335	-		IAI47_06015	0.86	+0.4
1,228,335	-		IAI47_06015	0.86	-0.8
1,228,335	-		IAI47_06015	0.86	+0.6
1,228,379	+		IAI47_06015	0.89	+7.1
1,228,379	+		IAI47_06015	0.89	+0.2
1,228,379	+		IAI47_06015	0.89	-2.0
1,228,379	+		IAI47_06015	0.89	+0.1
1,228,379	+		IAI47_06015	0.89	+1.9
1,228,380	-		IAI47_06015	0.89	+0.7
1,228,382	+		IAI47_06015	0.90	-1.2
1,228,382	+		IAI47_06015	0.90	+0.2
1,228,382	+		IAI47_06015	0.90	-0.5
1,228,383	-		IAI47_06015	0.90	+1.1
1,228,388	-				-0.9
1,228,446	+				-0.5
1,228,480	+				+0.0
1,228,480	+				-1.5
1,228,480	+				+0.5
1,228,480	+				+4.2
1,228,480	+				+0.3
1,228,481	-				-1.5
1,228,481	-				-1.1
1,228,481	-				+0.0
1,228,481	-				+0.4
1,228,481	-				+2.1
1,228,481	-				+1.3
1,228,481	-				-0.3
1,228,481	-				-0.9
1,228,481	-				-0.7
1,228,481	-				-0.8
1,228,483	+				+1.0
1,228,484	-				+1.4
1,228,513	+				+0.4
1,228,513	+				+0.3
1,228,514	-				+0.5
1,228,514	-				-0.0
1,228,514	-				+1.4
1,228,514	-				+2.6
1,228,524	+				+0.4
1,228,524	+				+0.3
1,228,524	+				+1.7
1,228,524	+				+7.8
1,228,524	+				-0.7
1,228,525	-				+1.0
1,228,525	-				+0.8
1,228,525	-				-0.5
1,228,525	-				+1.3
1,228,527	+				+1.0
1,228,528	-				+1.4
1,228,528	-				-1.7
1,228,528	-				-0.8
1,228,534	+				-0.4
1,228,534	+				-0.9
1,228,534	+				-1.8
1,228,535	-				+3.1
1,228,535	-				-0.6
1,228,535	-				+3.8
1,228,535	-				-2.1
1,228,535	-				+0.0
1,228,560	-				-0.4
1,228,560	-				+1.6
1,228,590	+		IAI47_06020	0.13	-0.8
1,228,591	-		IAI47_06020	0.13	-0.0
1,228,591	-		IAI47_06020	0.13	-1.6
1,228,591	-		IAI47_06020	0.13	+1.1
1,228,602	+		IAI47_06020	0.14	+0.7
1,228,602	+		IAI47_06020	0.14	-1.5
1,228,603	-		IAI47_06020	0.15	-2.2
1,228,603	-		IAI47_06020	0.15	-1.6
1,228,603	-		IAI47_06020	0.15	-1.9
1,228,603	-		IAI47_06020	0.15	-0.0
1,228,711	-		IAI47_06020	0.30	-0.5
1,228,723	+		IAI47_06020	0.32	+1.2
1,228,724	-		IAI47_06020	0.32	-0.6
1,228,724	-		IAI47_06020	0.32	+1.0
1,228,724	-		IAI47_06020	0.32	-1.2
1,228,724	-		IAI47_06020	0.32	-0.8
1,228,724	-		IAI47_06020	0.32	+1.7
1,228,724	-		IAI47_06020	0.32	+0.7
1,228,738	-		IAI47_06020	0.34	+0.6
1,228,748	+		IAI47_06020	0.36	+0.7
1,228,749	-		IAI47_06020	0.36	+0.0
1,228,749	-		IAI47_06020	0.36	+0.4
1,228,780	+		IAI47_06020	0.41	-1.7
1,228,780	+		IAI47_06020	0.41	-1.3
1,228,780	+		IAI47_06020	0.41	-2.6
1,228,822	+		IAI47_06020	0.47	+0.9
1,228,822	+		IAI47_06020	0.47	-0.7
1,228,822	+		IAI47_06020	0.47	-0.2
1,228,823	-		IAI47_06020	0.47	+0.6
1,228,823	-		IAI47_06020	0.47	+0.0
1,228,823	-		IAI47_06020	0.47	-0.4
1,228,823	-		IAI47_06020	0.47	-0.7
1,228,823	-		IAI47_06020	0.47	-0.5
1,228,832	+		IAI47_06020	0.48	+2.6
1,228,833	-		IAI47_06020	0.48	-0.1
1,228,848	-		IAI47_06020	0.51	+2.3
1,228,848	-		IAI47_06020	0.51	+1.0
1,228,848	-		IAI47_06020	0.51	-1.5
1,228,937	+		IAI47_06020	0.64	+1.6
1,228,937	+		IAI47_06020	0.64	-1.0
1,228,938	-		IAI47_06020	0.64	-0.1
1,228,938	-		IAI47_06020	0.64	-1.0
1,228,938	-		IAI47_06020	0.64	-0.6
1,228,938	-		IAI47_06020	0.64	-0.7
1,228,938	-		IAI47_06020	0.64	-0.0
1,228,964	+		IAI47_06020	0.68	+0.8
1,228,970	+		IAI47_06020	0.68	+0.0
1,228,970	+		IAI47_06020	0.68	+1.1
1,228,971	-		IAI47_06020	0.69	+0.5
1,228,971	-		IAI47_06020	0.69	+0.7
1,229,021	+		IAI47_06020	0.76	-0.5
1,229,022	-		IAI47_06020	0.76	-1.5
1,229,022	-		IAI47_06020	0.76	-2.1
1,229,022	-		IAI47_06020	0.76	-0.3
1,229,033	-		IAI47_06020	0.78	+0.2
1,229,033	-		IAI47_06020	0.78	+1.0
1,229,033	-		IAI47_06020	0.78	+4.2
1,229,043	-		IAI47_06020	0.79	+1.5
1,229,043	-		IAI47_06020	0.79	+0.0
1,229,057	+		IAI47_06020	0.81	-0.2
1,229,057	+		IAI47_06020	0.81	+1.6
1,229,057	+		IAI47_06020	0.81	-1.0
1,229,057	+		IAI47_06020	0.81	+2.6
1,229,058	-		IAI47_06020	0.81	-0.2
1,229,058	-		IAI47_06020	0.81	+1.0
1,229,058	-		IAI47_06020	0.81	+2.7
1,229,058	-		IAI47_06020	0.81	+0.6
1,229,058	-		IAI47_06020	0.81	-0.0
1,229,090	+		IAI47_06020	0.86	-0.8
1,229,091	-		IAI47_06020	0.86	+1.7
1,229,102	+		IAI47_06020	0.88	-0.1
1,229,140	+				-0.6
1,229,140	+				+0.1
1,229,141	-				-0.6
1,229,141	-				-1.7
1,229,141	-				-0.5
1,229,141	-				-0.9
1,229,142	+				-0.1
1,229,142	+				+0.3
1,229,174	+				+1.1
1,229,175	-				-0.2
1,229,175	-				+0.1
1,229,182	+				+1.5
1,229,183	-				+1.9
1,229,183	-				+1.3
1,229,190	-				-0.3
1,229,190	-				-0.5
1,229,190	-				+0.1
1,229,236	+				-0.9
1,229,250	+				+2.3
1,229,250	+				+0.2
1,229,250	+				-0.2
1,229,250	+				-0.6
1,229,311	+		IAI47_06025	0.14	+0.9
1,229,311	+		IAI47_06025	0.14	+0.1
1,229,312	-		IAI47_06025	0.14	-0.6
1,229,315	+		IAI47_06025	0.14	-1.2
1,229,315	+		IAI47_06025	0.14	+1.6
1,229,338	+		IAI47_06025	0.17	+0.6
1,229,338	+		IAI47_06025	0.17	-1.0
1,229,338	+		IAI47_06025	0.17	-0.0
1,229,339	-		IAI47_06025	0.17	+0.1
1,229,339	-		IAI47_06025	0.17	-0.4
1,229,339	-		IAI47_06025	0.17	+0.7
1,229,339	-		IAI47_06025	0.17	+0.7
1,229,339	-		IAI47_06025	0.17	-1.4
1,229,339	-		IAI47_06025	0.17	-0.1
1,229,350	+		IAI47_06025	0.18	-0.4
1,229,350	+		IAI47_06025	0.18	-0.4
1,229,350	+		IAI47_06025	0.18	+0.5
1,229,351	-		IAI47_06025	0.18	-0.7
1,229,351	-		IAI47_06025	0.18	+0.8
1,229,351	-		IAI47_06025	0.18	-1.5
1,229,382	-		IAI47_06025	0.22	-0.4
1,229,382	-		IAI47_06025	0.22	+1.5
1,229,405	+		IAI47_06025	0.24	+2.7
1,229,405	+		IAI47_06025	0.24	+0.1
1,229,405	+		IAI47_06025	0.24	+0.4
1,229,405	+		IAI47_06025	0.24	+0.2
1,229,405	+		IAI47_06025	0.24	+0.1
1,229,414	+		IAI47_06025	0.25	-1.6
1,229,415	-		IAI47_06025	0.25	-1.3
1,229,420	-		IAI47_06025	0.26	-1.0
1,229,420	-		IAI47_06025	0.26	+0.1
1,229,467	+		IAI47_06025	0.31	+0.7
1,229,467	+		IAI47_06025	0.31	-2.0
1,229,468	-		IAI47_06025	0.31	-0.1
1,229,502	+		IAI47_06025	0.35	+0.7
1,229,502	+		IAI47_06025	0.35	-1.2
1,229,502	+		IAI47_06025	0.35	+3.2
1,229,502	+		IAI47_06025	0.35	+0.1
1,229,502	+		IAI47_06025	0.35	+0.6
1,229,502	+		IAI47_06025	0.35	+0.4
1,229,502	+		IAI47_06025	0.35	+0.9
1,229,503	-		IAI47_06025	0.35	+0.0
1,229,503	-		IAI47_06025	0.35	+0.3
1,229,503	-		IAI47_06025	0.35	-0.7
1,229,503	-		IAI47_06025	0.35	-1.8
1,229,503	-		IAI47_06025	0.35	+1.8
1,229,503	-		IAI47_06025	0.35	+0.5
1,229,503	-		IAI47_06025	0.35	+1.9
1,229,503	-		IAI47_06025	0.35	-0.4
1,229,504	+		IAI47_06025	0.35	-0.5
1,229,504	+		IAI47_06025	0.35	+1.3
1,229,504	+		IAI47_06025	0.35	+0.9
1,229,504	+		IAI47_06025	0.35	+2.6
1,229,504	+		IAI47_06025	0.35	-2.2
1,229,504	+		IAI47_06025	0.35	-1.9
1,229,504	+		IAI47_06025	0.35	+1.3
1,229,504	+		IAI47_06025	0.35	-0.4
1,229,504	+		IAI47_06025	0.35	+0.4
1,229,504	+		IAI47_06025	0.35	-0.2
1,229,504	+		IAI47_06025	0.35	+0.8
1,229,504	+		IAI47_06025	0.35	+1.2
1,229,504	+		IAI47_06025	0.35	+1.0
1,229,504	+		IAI47_06025	0.35	+0.0
1,229,504	+		IAI47_06025	0.35	+0.2
1,229,504	+		IAI47_06025	0.35	-0.9
1,229,505	-		IAI47_06025	0.35	+0.5
1,229,505	-		IAI47_06025	0.35	+0.1
1,229,505	-		IAI47_06025	0.35	+1.1
1,229,505	-		IAI47_06025	0.35	-0.3
1,229,505	-		IAI47_06025	0.35	-1.3
1,229,505	-		IAI47_06025	0.35	-0.5
1,229,505	-		IAI47_06025	0.35	-0.2
1,229,528	+		IAI47_06025	0.38	-1.0
1,229,528	+		IAI47_06025	0.38	-0.1
1,229,529	-		IAI47_06025	0.38	-0.9
1,229,529	-		IAI47_06025	0.38	+1.4
1,229,531	+		IAI47_06025	0.38	-1.4
1,229,531	+		IAI47_06025	0.38	-0.9
1,229,531	+		IAI47_06025	0.38	+1.4
1,229,531	+		IAI47_06025	0.38	+0.9
1,229,531	+		IAI47_06025	0.38	-0.1
1,229,531	+		IAI47_06025	0.38	-0.8
1,229,532	-		IAI47_06025	0.38	+2.4
1,229,532	-		IAI47_06025	0.38	+1.9
1,229,532	-		IAI47_06025	0.38	+0.1
1,229,579	+		IAI47_06025	0.43	+2.2
1,229,580	-		IAI47_06025	0.44	+1.1
1,229,591	+		IAI47_06025	0.45	+0.7
1,229,591	+		IAI47_06025	0.45	-1.1
1,229,591	+		IAI47_06025	0.45	+0.8
1,229,591	+		IAI47_06025	0.45	-0.7
1,229,592	-		IAI47_06025	0.45	-0.5
1,229,592	-		IAI47_06025	0.45	-1.0
1,229,592	-		IAI47_06025	0.45	-1.9
1,229,592	-		IAI47_06025	0.45	-0.7
1,229,592	-		IAI47_06025	0.45	-0.8
1,229,592	-		IAI47_06025	0.45	-1.7
1,229,628	+		IAI47_06025	0.49	-0.1
1,229,629	-		IAI47_06025	0.49	-0.2
1,229,629	-		IAI47_06025	0.49	-1.8
1,229,633	+		IAI47_06025	0.49	+1.4
1,229,633	+		IAI47_06025	0.49	+0.4
1,229,633	+		IAI47_06025	0.49	+0.6
1,229,633	+		IAI47_06025	0.49	+0.1
1,229,633	+		IAI47_06025	0.49	-0.5
1,229,633	+		IAI47_06025	0.49	-0.5
1,229,633	+		IAI47_06025	0.49	+2.1
1,229,633	+		IAI47_06025	0.49	+0.6
1,229,633	+		IAI47_06025	0.49	+0.8
1,229,633	+		IAI47_06025	0.49	-0.5
1,229,633	+		IAI47_06025	0.49	-1.4
1,229,633	+		IAI47_06025	0.49	+0.2
1,229,634	-		IAI47_06025	0.50	+1.9
1,229,634	-		IAI47_06025	0.50	-0.9
1,229,634	-		IAI47_06025	0.50	-0.1
1,229,634	-		IAI47_06025	0.50	-1.6
1,229,634	-		IAI47_06025	0.50	-0.1
1,229,634	-		IAI47_06025	0.50	-0.5
1,229,640	+		IAI47_06025	0.50	+0.4
1,229,640	+		IAI47_06025	0.50	+0.3
1,229,640	+		IAI47_06025	0.50	-0.2
1,229,640	+		IAI47_06025	0.50	-1.5
1,229,640	+		IAI47_06025	0.50	+2.2
1,229,641	-		IAI47_06025	0.50	+4.3
1,229,641	-		IAI47_06025	0.50	-0.1
1,229,641	-		IAI47_06025	0.50	+1.3
1,229,641	-		IAI47_06025	0.50	-0.6
1,229,644	+		IAI47_06025	0.51	-1.2
1,229,644	+		IAI47_06025	0.51	-0.5
1,229,645	-		IAI47_06025	0.51	-1.3
1,229,645	-		IAI47_06025	0.51	+1.3
1,229,645	-		IAI47_06025	0.51	+3.7
1,229,645	-		IAI47_06025	0.51	-1.7
1,229,664	+		IAI47_06025	0.53	+0.0
1,229,664	+		IAI47_06025	0.53	-1.2
1,229,664	+		IAI47_06025	0.53	-0.3
1,229,664	+		IAI47_06025	0.53	-1.2
1,229,664	+		IAI47_06025	0.53	+1.7
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