Strain Fitness in Rahnella sp. WP5 around EX31_RS21895

Experiment: L-Glutamine (N); ShewMM media; no shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N); ShewMM media; no shaking
120,091	+		EX31_RS21890	0.53	+1.4
120,091	+		EX31_RS21890	0.53	-0.3
120,092	-		EX31_RS21890	0.53	+1.0
120,188	+		EX31_RS21890	0.59	+0.4
120,188	+		EX31_RS21890	0.59	-0.4
120,188	+		EX31_RS21890	0.59	-1.3
120,188	+		EX31_RS21890	0.59	+0.6
120,188	+		EX31_RS21890	0.59	+2.1
120,189	-		EX31_RS21890	0.60	+0.1
120,189	-		EX31_RS21890	0.60	-0.8
120,189	-		EX31_RS21890	0.60	-0.2
120,189	-		EX31_RS21890	0.60	+0.3
120,189	-		EX31_RS21890	0.60	-1.4
120,189	-		EX31_RS21890	0.60	+1.1
120,189	-		EX31_RS21890	0.60	-0.8
120,189	-		EX31_RS21890	0.60	-1.3
120,189	-		EX31_RS21890	0.60	-1.6
120,189	-		EX31_RS21890	0.60	-1.1
120,189	-		EX31_RS21890	0.60	+0.2
120,189	-		EX31_RS21890	0.60	+0.5
120,190	+		EX31_RS21890	0.60	-0.3
120,191	-		EX31_RS21890	0.60	+0.5
120,200	+		EX31_RS21890	0.60	+1.0
120,201	-		EX31_RS21890	0.60	-0.3
120,242	+		EX31_RS21890	0.63	-0.0
120,243	-		EX31_RS21890	0.63	+0.1
120,403	+		EX31_RS21890	0.74	-0.0
120,403	+		EX31_RS21890	0.74	-0.7
120,404	-		EX31_RS21890	0.74	-0.0
120,404	-		EX31_RS21890	0.74	-1.1
120,406	+		EX31_RS21890	0.74	-0.0
120,406	+		EX31_RS21890	0.74	-1.6
120,407	-		EX31_RS21890	0.74	-0.0
120,407	-		EX31_RS21890	0.74	-0.5
120,448	+		EX31_RS21890	0.77	+0.1
120,448	+		EX31_RS21890	0.77	-1.3
120,448	+		EX31_RS21890	0.77	+0.1
120,448	+		EX31_RS21890	0.77	+0.4
120,448	+		EX31_RS21890	0.77	+0.6
120,449	-		EX31_RS21890	0.77	-0.0
120,476	+		EX31_RS21890	0.79	+1.0
120,476	+		EX31_RS21890	0.79	-0.0
120,477	-		EX31_RS21890	0.79	-1.8
120,479	+		EX31_RS21890	0.79	-0.6
120,479	+		EX31_RS21890	0.79	+0.2
120,479	+		EX31_RS21890	0.79	-0.7
120,480	-		EX31_RS21890	0.79	-1.8
120,480	-		EX31_RS21890	0.79	-0.0
120,480	-		EX31_RS21890	0.79	+0.5
120,480	-		EX31_RS21890	0.79	+1.0
120,550	+		EX31_RS21890	0.84	+0.7
120,550	+		EX31_RS21890	0.84	+0.7
120,551	-		EX31_RS21890	0.84	-1.2
120,612	-		EX31_RS21890	0.89	+0.5
120,640	-				+0.0
120,664	-				-0.3
120,761	+				+0.4
120,761	+				-0.2
120,781	+				-0.3
120,782	-				-1.2
120,817	+				-1.1
120,817	+				-0.5
120,818	-				+0.5
120,818	-				-0.7
120,830	+				-1.8
120,831	-				-0.3
120,839	+				-0.3
120,839	+				+0.6
120,839	+				+0.6
120,839	+				+1.0
120,839	+				+0.3
120,839	+				+0.2
120,839	+				+0.4
120,839	+				-0.9
120,839	+				-0.8
120,839	+				-0.3
120,840	-				-0.3
120,840	-				+0.4
120,840	-				-0.1
120,840	-				+0.7
120,840	-				+0.4
120,891	+				-0.5
120,892	-				+0.7
120,892	-				+1.8
120,912	-				+1.1
120,912	-				+0.1
120,912	-				-0.9
120,912	-				-0.4
120,912	-				-1.0
120,912	-				+0.7
120,978	+				-1.0
120,978	+				-1.9
120,979	-				-0.8
120,979	-				-3.3
120,979	-				-3.0
120,980	+				-0.4
120,981	-				-1.3
120,981	-				-4.2
120,981	-				-2.5
120,981	-				-3.3
120,981	-				-2.3
120,981	-				-1.7
120,981	-				-2.0
120,983	+				-1.7
120,984	-				-3.1
120,984	-				-1.2
121,058	-				-1.6
121,065	+				-1.7
121,066	-				-2.2
121,151	-				-4.1
121,151	-				-2.4
121,154	+				-1.3
121,154	+				-0.0
121,155	-				-1.9
121,155	-				-2.0
121,155	-				-2.6
121,163	+				-1.5
121,163	+				-1.8
121,163	+				-2.3
121,164	-				-3.0
121,164	-				-3.2
121,164	-				-2.6
121,164	-				-3.2
121,167	+				-2.3
121,167	+				-1.9
121,168	-				-3.9
121,168	-				-2.9
121,218	+				-2.8
121,219	-				-1.9
121,219	-				-2.4
121,219	-				-1.0
121,235	+				-2.3
121,236	-				-2.2
121,275	+				-4.7
121,276	-				-2.5
121,276	-				-0.0
121,327	+				-4.0
121,328	-				-3.5
121,333	+				+0.4
121,391	+				-2.3
121,392	-				-1.8
121,392	-				-2.6
121,392	-				-2.8
121,392	-				-1.0
121,395	+				-2.6
121,395	+				-3.5
121,395	+				-2.9
121,396	-				-0.3
121,396	-				-3.6
121,443	+				-4.2
121,587	+		EX31_RS21895	0.14	-2.7
121,587	+		EX31_RS21895	0.14	-2.9
121,587	+		EX31_RS21895	0.14	-2.6
121,588	-		EX31_RS21895	0.14	-1.6
121,619	+		EX31_RS21895	0.14	-0.8
121,636	+		EX31_RS21895	0.15	-2.3
121,636	+		EX31_RS21895	0.15	-3.6
121,636	+		EX31_RS21895	0.15	-2.9
121,636	+		EX31_RS21895	0.15	-1.9
121,637	-		EX31_RS21895	0.15	-1.0
121,637	-		EX31_RS21895	0.15	-0.8
121,673	+		EX31_RS21895	0.16	-2.2
121,673	+		EX31_RS21895	0.16	-3.2
121,673	+		EX31_RS21895	0.16	-2.1
121,673	+		EX31_RS21895	0.16	-0.8
121,673	+		EX31_RS21895	0.16	-2.9
121,673	+		EX31_RS21895	0.16	-2.8
121,673	+		EX31_RS21895	0.16	-3.7
121,673	+		EX31_RS21895	0.16	-2.4
121,673	+		EX31_RS21895	0.16	-1.2
121,673	+		EX31_RS21895	0.16	-1.6
121,673	+		EX31_RS21895	0.16	-0.8
121,673	+		EX31_RS21895	0.16	-2.5
121,674	-		EX31_RS21895	0.16	-2.8
121,674	-		EX31_RS21895	0.16	-1.2
121,674	-		EX31_RS21895	0.16	-2.2
121,674	-		EX31_RS21895	0.16	-2.8
121,674	-		EX31_RS21895	0.16	-1.2
121,674	-		EX31_RS21895	0.16	-0.0
121,674	-		EX31_RS21895	0.16	-1.7
121,674	-		EX31_RS21895	0.16	-2.8
121,674	-		EX31_RS21895	0.16	-2.1
121,674	-		EX31_RS21895	0.16	-1.9
121,674	-		EX31_RS21895	0.16	-2.8
121,674	-		EX31_RS21895	0.16	-1.6
121,674	-		EX31_RS21895	0.16	-3.2
121,675	+		EX31_RS21895	0.16	-3.2
121,675	+		EX31_RS21895	0.16	-0.8
121,675	+		EX31_RS21895	0.16	-2.6
121,675	+		EX31_RS21895	0.16	-2.2
121,675	+		EX31_RS21895	0.16	-3.6
121,675	+		EX31_RS21895	0.16	-1.5
121,675	+		EX31_RS21895	0.16	-1.9
121,675	+		EX31_RS21895	0.16	-1.8
121,675	+		EX31_RS21895	0.16	-1.5
121,676	-		EX31_RS21895	0.16	-2.2
121,676	-		EX31_RS21895	0.16	-3.3
121,676	-		EX31_RS21895	0.16	+0.4
121,676	-		EX31_RS21895	0.16	-2.7
121,676	-		EX31_RS21895	0.16	-2.1
121,676	-		EX31_RS21895	0.16	-2.6
121,735	+		EX31_RS21895	0.17	-1.8
121,768	+		EX31_RS21895	0.18	-2.4
121,768	+		EX31_RS21895	0.18	-2.7
121,769	-		EX31_RS21895	0.18	-3.0
121,769	-		EX31_RS21895	0.18	-2.6
121,783	+		EX31_RS21895	0.19	-3.7
121,783	+		EX31_RS21895	0.19	-3.1
121,783	+		EX31_RS21895	0.19	-1.7
121,784	-		EX31_RS21895	0.19	-2.7
121,820	+		EX31_RS21895	0.20	-3.0
121,822	+		EX31_RS21895	0.20	-3.1
121,823	-		EX31_RS21895	0.20	-3.7
121,918	+		EX31_RS21895	0.22	-4.8
121,919	-		EX31_RS21895	0.22	-3.8
121,919	-		EX31_RS21895	0.22	-2.4
122,077	+		EX31_RS21895	0.26	-1.6
122,077	+		EX31_RS21895	0.26	-3.3
122,078	-		EX31_RS21895	0.26	-1.9
122,078	-		EX31_RS21895	0.26	-1.6
122,116	+		EX31_RS21895	0.27	-5.1
122,182	+		EX31_RS21895	0.29	-3.3
122,216	+		EX31_RS21895	0.30	-3.0
122,224	+		EX31_RS21895	0.30	-2.2
122,224	+		EX31_RS21895	0.30	-4.0
122,229	-		EX31_RS21895	0.30	-0.0
122,245	+		EX31_RS21895	0.31	-2.6
122,246	-		EX31_RS21895	0.31	-0.8
122,246	-		EX31_RS21895	0.31	-2.5
122,367	+		EX31_RS21895	0.34	-1.2
122,367	+		EX31_RS21895	0.34	-1.1
122,367	+		EX31_RS21895	0.34	-2.3
122,368	-		EX31_RS21895	0.34	+0.4
122,368	-		EX31_RS21895	0.34	-3.5
122,419	+		EX31_RS21895	0.35	-1.6
122,420	-		EX31_RS21895	0.35	-2.6
122,420	-		EX31_RS21895	0.35	-0.6
122,464	-		EX31_RS21895	0.36	-1.7
122,547	+		EX31_RS21895	0.38	-3.7
122,547	+		EX31_RS21895	0.38	-2.5
122,548	-		EX31_RS21895	0.38	-2.6
122,548	-		EX31_RS21895	0.38	-0.3
122,552	-		EX31_RS21895	0.38	-1.6
122,552	-		EX31_RS21895	0.38	-1.7
122,552	-		EX31_RS21895	0.38	-1.8
122,552	-		EX31_RS21895	0.38	-1.0
122,577	+		EX31_RS21895	0.39	-5.3
122,578	-		EX31_RS21895	0.39	-1.5
122,578	-		EX31_RS21895	0.39	-2.5
122,581	+		EX31_RS21895	0.39	-3.2
122,581	+		EX31_RS21895	0.39	-3.8
122,686	+		EX31_RS21895	0.42	-1.3
122,686	+		EX31_RS21895	0.42	-2.0
122,687	-		EX31_RS21895	0.42	-2.5
122,705	+		EX31_RS21895	0.42	-3.3
122,705	+		EX31_RS21895	0.42	-1.7
122,705	+		EX31_RS21895	0.42	-3.5
122,706	-		EX31_RS21895	0.42	-2.1
122,706	-		EX31_RS21895	0.42	-1.2
122,706	-		EX31_RS21895	0.42	-2.6
122,851	+		EX31_RS21895	0.46	-2.1
122,852	-		EX31_RS21895	0.46	-2.6
123,122	+		EX31_RS21895	0.53	-2.2
123,122	+		EX31_RS21895	0.53	-3.5
123,122	+		EX31_RS21895	0.53	-2.6
123,122	+		EX31_RS21895	0.53	-2.5
123,123	-		EX31_RS21895	0.53	-3.9
123,123	-		EX31_RS21895	0.53	+2.0
123,220	+		EX31_RS21895	0.56	-2.6
123,269	-		EX31_RS21895	0.57	-2.5
123,314	+		EX31_RS21895	0.58	-3.1
123,315	-		EX31_RS21895	0.58	-3.2
123,325	-		EX31_RS21895	0.58	-3.1
123,364	+		EX31_RS21895	0.59	-2.6
123,364	+		EX31_RS21895	0.59	-1.8
123,364	+		EX31_RS21895	0.59	-3.0
123,365	-		EX31_RS21895	0.59	-1.9
123,367	+		EX31_RS21895	0.59	-4.6
123,367	+		EX31_RS21895	0.59	-4.3
123,367	+		EX31_RS21895	0.59	-2.8
123,367	+		EX31_RS21895	0.59	-2.5
123,367	+		EX31_RS21895	0.59	-2.6
123,368	-		EX31_RS21895	0.59	+0.4
123,456	+		EX31_RS21895	0.62	-3.4
123,457	-		EX31_RS21895	0.62	-2.2
123,565	+		EX31_RS21895	0.64	-1.6
123,565	+		EX31_RS21895	0.64	-3.3
123,704	+		EX31_RS21895	0.68	-3.2
123,704	+		EX31_RS21895	0.68	-4.2
123,920	+		EX31_RS21895	0.74	-3.1
123,920	+		EX31_RS21895	0.74	-2.9
123,920	+		EX31_RS21895	0.74	-2.7
123,921	-		EX31_RS21895	0.74	-1.8
123,970	+		EX31_RS21895	0.75	-3.0
123,981	-		EX31_RS21895	0.75	-3.2
124,146	+		EX31_RS21895	0.79	-3.4
124,157	+		EX31_RS21895	0.80	-3.1
124,157	+		EX31_RS21895	0.80	-2.5
124,157	+		EX31_RS21895	0.80	-1.4
124,157	+		EX31_RS21895	0.80	-1.8
124,157	+		EX31_RS21895	0.80	-1.7
124,158	-		EX31_RS21895	0.80	-1.0
124,158	-		EX31_RS21895	0.80	-0.6
124,273	+		EX31_RS21895	0.83	-1.2
124,273	+		EX31_RS21895	0.83	-3.3
124,273	+		EX31_RS21895	0.83	-3.1
124,274	-		EX31_RS21895	0.83	-1.7
124,274	-		EX31_RS21895	0.83	-3.5
124,274	-		EX31_RS21895	0.83	-2.8
124,274	-		EX31_RS21895	0.83	-2.1
124,274	-		EX31_RS21895	0.83	-2.7
124,274	-		EX31_RS21895	0.83	-2.8
124,274	-		EX31_RS21895	0.83	-2.2
124,274	-		EX31_RS21895	0.83	-0.1
124,274	-		EX31_RS21895	0.83	+0.4
124,305	+		EX31_RS21895	0.83	-0.3
124,305	+		EX31_RS21895	0.83	-3.5
124,305	+		EX31_RS21895	0.83	-2.3
124,306	-		EX31_RS21895	0.83	-2.6
124,326	+		EX31_RS21895	0.84	-2.6
124,347	-		EX31_RS21895	0.85	-3.2
124,347	-		EX31_RS21895	0.85	-0.8
124,347	-		EX31_RS21895	0.85	-0.8
124,603	+				-3.2
124,603	+				-1.3
124,627	+				-3.1
124,627	+				-2.5
124,628	-				-2.5
124,628	-				-2.3
124,628	-				-3.2
124,628	-				-0.6
124,804	+				-3.1
124,805	-				-3.5
124,827	+				-3.2
124,827	+				-3.2
124,828	-				-1.9
124,828	-				-2.0
124,953	+				+0.7
124,953	+				-0.6
124,954	-				+1.4
124,956	+				+0.2
124,956	+				+1.0
124,956	+				-1.2
125,072	+				+0.8
125,122	-				-1.2
125,161	-				-0.8
125,169	-				+0.1
125,170	+				-0.6
125,171	-				-0.6
125,186	+				+0.2
125,188	+				+1.1
125,189	-				-0.3
125,329	-		EX31_RS21900	0.17	-0.8
125,394	+		EX31_RS21900	0.27	+0.3
125,469	+		EX31_RS21900	0.39	-1.2
125,470	-		EX31_RS21900	0.39	-0.7
125,470	-		EX31_RS21900	0.39	-0.3
125,499	+		EX31_RS21900	0.44	+0.4
125,500	-		EX31_RS21900	0.44	+0.7
125,570	-		EX31_RS21900	0.55	+0.1
125,596	-		EX31_RS21900	0.60	+0.4
125,681	-		EX31_RS21900	0.73	-0.3
125,681	-		EX31_RS21900	0.73	-0.6
125,682	+		EX31_RS21900	0.73	-1.3
125,683	-		EX31_RS21900	0.74	-0.6
125,683	-		EX31_RS21900	0.74	+0.8
125,684	+		EX31_RS21900	0.74	+1.4
125,684	+		EX31_RS21900	0.74	+0.6
125,684	+		EX31_RS21900	0.74	-0.8
125,684	+		EX31_RS21900	0.74	-1.3
125,685	-		EX31_RS21900	0.74	-0.0
125,685	-		EX31_RS21900	0.74	-1.2
125,685	-		EX31_RS21900	0.74	-0.0
125,685	-		EX31_RS21900	0.74	+0.4
125,710	+		EX31_RS21900	0.78	-0.4
125,716	+		EX31_RS21900	0.79	-0.1
125,781	+		EX31_RS21900	0.89	-0.4
125,781	+		EX31_RS21900	0.89	+0.7
125,785	+				+0.5
125,785	+				+0.3
125,785	+				+1.6
125,786	-				+1.2
125,786	-				+0.4