Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03325

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
3,505,191	+		CCNA_03323	0.70	-2.3
3,505,191	-		CCNA_03323	0.70	-2.5
3,505,223	-		CCNA_03323	0.72	-2.0
3,505,232	+		CCNA_03323	0.73	+0.5
3,505,232	+		CCNA_03323	0.73	-2.1
3,505,234	-		CCNA_03323	0.73	-0.8
3,505,240	-		CCNA_03323	0.74	-1.7
3,505,252	+		CCNA_03323	0.75	-1.7
3,505,264	+		CCNA_03323	0.76	-2.3
3,505,304	+		CCNA_03323	0.79	-2.7
3,505,363	+		CCNA_03323	0.84	-2.7
3,505,391	-		CCNA_03323	0.86	-1.9
3,505,406	+		CCNA_03323	0.88	+0.5
3,505,414	-		CCNA_03323	0.88	+1.0
3,505,416	+		CCNA_03323	0.89	+0.7
3,505,416	+		CCNA_03323	0.89	-0.5
3,505,416	+		CCNA_03323	0.89	-2.7
3,505,416	+		CCNA_03323	0.89	-1.5
3,505,416	+		CCNA_03323	0.89	-1.4
3,505,419	-		CCNA_03323	0.89	-1.3
3,505,419	-		CCNA_03323	0.89	-3.9
3,505,424	-		CCNA_03323	0.89	-2.3
3,505,424	-		CCNA_03323	0.89	-2.2
3,505,424	-		CCNA_03323	0.89	-3.4
3,505,424	-		CCNA_03323	0.89	-1.6
3,505,424	-		CCNA_03323	0.89	-1.6
3,505,435	+				-1.4
3,505,443	-				-3.5
3,505,443	-				-0.3
3,505,465	+				-1.1
3,505,471	+				+2.5
3,505,473	-				-2.6
3,505,546	+				-3.6
3,505,572	+				-0.3
3,505,574	+				-2.6
3,505,595	-				-1.4
3,505,741	+		CCNA_03324	0.13	-1.4
3,505,812	+		CCNA_03324	0.29	-0.3
3,505,849	-		CCNA_03324	0.38	-0.4
3,505,897	-		CCNA_03324	0.49	+0.2
3,505,897	-		CCNA_03324	0.49	+0.7
3,505,975	-		CCNA_03324	0.67	-0.5
3,506,002	+		CCNA_03324	0.73	+0.9
3,506,036	+		CCNA_03324	0.81	+1.1
3,506,036	+		CCNA_03324	0.81	-0.8
3,506,036	+		CCNA_03324	0.81	-0.1
3,506,036	+		CCNA_03324	0.81	+1.1
3,506,036	+		CCNA_03324	0.81	+0.3
3,506,042	-		CCNA_03324	0.83	+1.6
3,506,044	-		CCNA_03324	0.83	-0.0
3,506,044	-		CCNA_03324	0.83	-0.2
3,506,044	-		CCNA_03324	0.83	-0.3
3,506,044	-		CCNA_03324	0.83	-0.5
3,506,044	-		CCNA_03324	0.83	-0.3
3,506,044	-		CCNA_03324	0.83	-0.4
3,506,104	-				-0.5
3,506,138	-				+2.3
3,506,138	-				+2.0
3,506,150	-				+2.5
3,506,220	-		CCNA_03325	0.10	+2.9
3,506,251	+		CCNA_03325	0.20	-2.7
3,506,296	-		CCNA_03325	0.34	+2.7
3,506,300	+		CCNA_03325	0.35	-2.6
3,506,323	-		CCNA_03325	0.42	+2.6
3,506,335	-		CCNA_03325	0.46	+2.8
3,506,355	-		CCNA_03325	0.52	+2.8
3,506,391	-		CCNA_03325	0.63	+2.4
3,506,423	-		CCNA_03325	0.72	+2.2
3,506,438	-		CCNA_03325	0.77	+1.9
3,506,448	-		CCNA_03325	0.80	+2.0
3,506,496	+				-2.5
3,506,518	+				-1.5
3,506,650	+				-0.4
3,506,658	-				+2.2
3,506,746	+				+0.4
3,506,746	+				-0.2
3,506,750	+				-0.2
3,506,756	+				+1.7
3,506,756	+				+0.7
3,506,764	-				-0.5
3,506,764	-				+0.7
3,506,764	-				-2.5
3,506,781	+				+0.9
3,506,782	+				+0.7
3,506,802	-		CCNA_03326	0.10	+0.1
3,506,808	+		CCNA_03326	0.11	+1.4
3,506,813	-		CCNA_03326	0.11	-0.7
3,506,843	+		CCNA_03326	0.13	+0.2
3,506,863	-		CCNA_03326	0.14	-0.5
3,506,870	+		CCNA_03326	0.14	+0.7
3,506,923	-		CCNA_03326	0.17	-1.3
3,506,997	+		CCNA_03326	0.20	+1.0
3,507,007	-		CCNA_03326	0.21	+0.5
3,507,015	-		CCNA_03326	0.21	-0.5
3,507,016	-		CCNA_03326	0.21	+0.8
3,507,023	+		CCNA_03326	0.22	+0.9
3,507,023	+		CCNA_03326	0.22	+1.7
3,507,039	-		CCNA_03326	0.22	+1.6
3,507,080	+		CCNA_03326	0.25	+0.9
3,507,089	-		CCNA_03326	0.25	+1.9
3,507,102	-		CCNA_03326	0.26	-1.4
3,507,132	-		CCNA_03326	0.27	-0.7
3,507,146	+		CCNA_03326	0.28	+0.4
3,507,187	-		CCNA_03326	0.30	-2.0
3,507,195	-				+1.0
3,507,207	-		CCNA_03326	0.31	+0.2
3,507,224	+		CCNA_03326	0.32	+1.0
3,507,224	+		CCNA_03326	0.32	+0.3
3,507,224	+		CCNA_03326	0.32	+1.0
3,507,232	-		CCNA_03326	0.32	+1.4
3,507,232	-		CCNA_03326	0.32	-0.6
3,507,260	+		CCNA_03326	0.34	+3.2
3,507,260	+		CCNA_03326	0.34	+0.1
3,507,260	+		CCNA_03326	0.34	-0.1
3,507,260	+		CCNA_03326	0.34	-0.2
3,507,268	+		CCNA_03326	0.34	-0.9
3,507,268	+		CCNA_03326	0.34	+1.0
3,507,268	+		CCNA_03326	0.34	+1.2
3,507,268	+		CCNA_03326	0.34	+0.5
3,507,268	-		CCNA_03326	0.34	-1.0
3,507,268	-		CCNA_03326	0.34	-0.2
3,507,270	+		CCNA_03326	0.34	+1.0
3,507,270	+		CCNA_03326	0.34	+0.4
3,507,270	+		CCNA_03326	0.34	+2.1
3,507,270	+		CCNA_03326	0.34	+1.1
3,507,276	-		CCNA_03326	0.34	-0.6
3,507,276	-		CCNA_03326	0.34	+0.4
3,507,276	-		CCNA_03326	0.34	-0.7
3,507,276	-		CCNA_03326	0.34	+0.5
3,507,278	-		CCNA_03326	0.35	-2.4
3,507,282	+		CCNA_03326	0.35	+0.1
3,507,294	+		CCNA_03326	0.35	+0.8
3,507,315	+		CCNA_03326	0.36	+1.5
3,507,316	+		CCNA_03326	0.37	-1.2
3,507,323	-		CCNA_03326	0.37	+0.3
3,507,323	-		CCNA_03326	0.37	-1.0
3,507,325	+		CCNA_03326	0.37	+0.9
3,507,325	+		CCNA_03326	0.37	+1.0
3,507,338	+		CCNA_03326	0.38	+0.9
3,507,359	-		CCNA_03326	0.39	-0.0
3,507,383	+		CCNA_03326	0.40	+0.4
3,507,383	+		CCNA_03326	0.40	+0.8
3,507,383	+		CCNA_03326	0.40	-0.2
3,507,391	-		CCNA_03326	0.40	+0.5
3,507,391	-		CCNA_03326	0.40	-0.9
3,507,391	-		CCNA_03326	0.40	+1.0
3,507,425	-		CCNA_03326	0.42	-2.3
3,507,465	+		CCNA_03326	0.44	+1.4
3,507,465	+		CCNA_03326	0.44	+3.9
3,507,465	+		CCNA_03326	0.44	+2.0
3,507,465	+		CCNA_03326	0.44	-0.8
3,507,465	+		CCNA_03326	0.44	-1.0
3,507,475	-		CCNA_03326	0.45	-0.4
3,507,475	-		CCNA_03326	0.45	-1.6
3,507,482	+		CCNA_03326	0.45	+1.3