Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01879

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,017,614	-		CCNA_01878	0.52	-1.5
2,017,655	+		CCNA_01878	0.55	-2.5
2,017,658	-		CCNA_01878	0.55	-0.9
2,017,672	-		CCNA_01878	0.56	-1.4
2,017,706	+		CCNA_01878	0.58	+1.8
2,017,706	+		CCNA_01878	0.58	-1.6
2,017,706	+		CCNA_01878	0.58	-1.3
2,017,714	-		CCNA_01878	0.58	-0.4
2,017,714	-		CCNA_01878	0.58	-1.2
2,017,714	-		CCNA_01878	0.58	-1.3
2,017,714	-		CCNA_01878	0.58	-0.5
2,017,744	+		CCNA_01878	0.60	-0.4
2,017,760	+		CCNA_01878	0.61	+1.2
2,017,803	+		CCNA_01878	0.64	+2.7
2,017,833	+		CCNA_01878	0.66	+0.7
2,017,833	+		CCNA_01878	0.66	-0.2
2,017,833	+		CCNA_01878	0.66	-1.7
2,017,833	+		CCNA_01878	0.66	+0.3
2,017,833	+		CCNA_01878	0.66	-1.0
2,017,833	+		CCNA_01878	0.66	-1.5
2,017,833	+		CCNA_01878	0.66	-1.6
2,017,833	+		CCNA_01878	0.66	-0.7
2,017,833	+		CCNA_01878	0.66	-1.6
2,017,833	+		CCNA_01878	0.66	-0.2
2,017,833	+		CCNA_01878	0.66	+1.6
2,017,833	+		CCNA_01878	0.66	-1.7
2,017,833	+		CCNA_01878	0.66	-0.6
2,017,833	+		CCNA_01878	0.66	-2.2
2,017,833	+		CCNA_01878	0.66	-1.8
2,017,833	+		CCNA_01878	0.66	-0.2
2,017,833	+		CCNA_01878	0.66	-0.4
2,017,833	+		CCNA_01878	0.66	-1.6
2,017,833	+		CCNA_01878	0.66	+1.2
2,017,833	+		CCNA_01878	0.66	-2.0
2,017,833	+		CCNA_01878	0.66	-1.8
2,017,833	+		CCNA_01878	0.66	-2.3
2,017,833	+		CCNA_01878	0.66	+1.2
2,017,833	+		CCNA_01878	0.66	-1.5
2,017,833	+		CCNA_01878	0.66	-1.1
2,017,834	-		CCNA_01878	0.66	-1.7
2,017,841	-		CCNA_01878	0.66	+0.8
2,017,841	-		CCNA_01878	0.66	+2.1
2,017,841	-		CCNA_01878	0.66	-1.2
2,017,841	-		CCNA_01878	0.66	-0.4
2,017,841	-		CCNA_01878	0.66	-0.9
2,017,841	-		CCNA_01878	0.66	+0.6
2,017,841	-		CCNA_01878	0.66	-2.0
2,017,841	-		CCNA_01878	0.66	-1.8
2,017,841	-		CCNA_01878	0.66	+1.2
2,017,841	-		CCNA_01878	0.66	-3.2
2,017,841	-		CCNA_01878	0.66	-2.1
2,017,841	-		CCNA_01878	0.66	-1.0
2,017,841	-		CCNA_01878	0.66	-0.0
2,017,841	-		CCNA_01878	0.66	-1.4
2,017,841	-		CCNA_01878	0.66	-1.8
2,017,841	-		CCNA_01878	0.66	-1.5
2,017,841	-		CCNA_01878	0.66	-0.8
2,017,841	-		CCNA_01878	0.66	+0.0
2,017,841	-		CCNA_01878	0.66	-0.9
2,017,841	-		CCNA_01878	0.66	-1.9
2,017,841	-		CCNA_01878	0.66	-0.4
2,017,841	-		CCNA_01878	0.66	-1.5
2,017,841	-		CCNA_01878	0.66	-1.5
2,017,841	-		CCNA_01878	0.66	-1.9
2,017,841	-		CCNA_01878	0.66	-1.3
2,017,841	-		CCNA_01878	0.66	-0.2
2,017,860	+		CCNA_01878	0.68	-1.1
2,017,865	+		CCNA_01878	0.68	-1.4
2,017,868	-		CCNA_01878	0.68	-2.4
2,017,932	-		CCNA_01878	0.72	+0.5
2,017,935	+		CCNA_01878	0.72	-0.5
2,017,938	-		CCNA_01878	0.72	-1.6
2,017,943	-		CCNA_01878	0.73	-1.2
2,017,943	-		CCNA_01878	0.73	-3.0
2,017,952	+		CCNA_01878	0.73	-2.5
2,017,952	+		CCNA_01878	0.73	-1.9
2,017,992	+		CCNA_01878	0.76	-1.4
2,017,997	+		CCNA_01878	0.76	-2.3
2,017,999	+		CCNA_01878	0.76	-0.8
2,018,036	-		CCNA_01878	0.79	+0.2
2,018,057	+		CCNA_01878	0.80	-1.9
2,018,060	+		CCNA_01878	0.80	-0.7
2,018,081	-		CCNA_01878	0.81	-4.1
2,018,084	+		CCNA_01878	0.82	-1.7
2,018,128	+		CCNA_01878	0.84	+1.4
2,018,170	+		CCNA_01878	0.87	-0.5
2,018,178	-		CCNA_01878	0.87	-1.7
2,018,237	+				-1.1
2,018,237	+				-0.8
2,018,258	-				-0.1
2,018,277	-				-0.8
2,018,301	+				-2.2
2,018,309	-				+0.5
2,018,319	+				+0.8
2,018,406	+				-0.5
2,018,414	-				-1.5
2,018,414	-				-1.0
2,018,414	-				+1.8
2,018,414	-				-2.2
2,018,414	-				-0.9
2,018,428	+				-1.4
2,018,450	-				-2.6
2,018,583	+				-0.6
2,018,585	+				-1.3
2,018,585	+				-1.2
2,018,636	-				-1.9
2,018,702	+				-0.5
2,018,746	+		CCNA_01879	0.13	-1.4
2,018,759	-		CCNA_01879	0.14	-1.2
2,018,776	+		CCNA_01879	0.16	+0.1
2,018,832	+		CCNA_01879	0.21	-1.5
2,018,832	+		CCNA_01879	0.21	-2.9
2,018,843	+		CCNA_01879	0.22	+0.1
2,018,845	-		CCNA_01879	0.22	-1.5
2,018,876	-		CCNA_01879	0.25	+0.5
2,018,992	+		CCNA_01879	0.36	-1.3
2,019,052	+		CCNA_01879	0.41	-1.9
2,019,054	-		CCNA_01879	0.41	-0.9
2,019,054	-		CCNA_01879	0.41	-0.1
2,019,060	-		CCNA_01879	0.42	-0.8
2,019,060	-		CCNA_01879	0.42	+0.8
2,019,110	+		CCNA_01879	0.46	-0.4
2,019,141	-		CCNA_01879	0.49	-1.1
2,019,155	-		CCNA_01879	0.50	+1.6
2,019,167	-		CCNA_01879	0.51	-0.0
2,019,212	-		CCNA_01879	0.55	+1.4
2,019,214	+		CCNA_01879	0.56	-1.0
2,019,214	+		CCNA_01879	0.56	-0.9
2,019,214	+		CCNA_01879	0.56	-0.9
2,019,222	-		CCNA_01879	0.56	-0.2
2,019,222	-		CCNA_01879	0.56	-0.2
2,019,222	-		CCNA_01879	0.56	-1.2
2,019,222	-				+0.5
2,019,281	+		CCNA_01879	0.62	-1.3
2,019,288	+		CCNA_01879	0.62	-1.7
2,019,333	+		CCNA_01879	0.66	+0.1
2,019,348	-		CCNA_01879	0.68	-1.0
2,019,355	-		CCNA_01879	0.68	-1.1
2,019,373	-		CCNA_01879	0.70	+0.6
2,019,373	-		CCNA_01879	0.70	-0.0
2,019,373	-		CCNA_01879	0.70	-0.0
2,019,424	-		CCNA_01879	0.75	-2.0
2,019,436	+		CCNA_01879	0.76	+0.1
2,019,444	-		CCNA_01879	0.76	-0.7
2,019,475	-		CCNA_01879	0.79	+0.8
2,019,476	-		CCNA_01879	0.79	-0.4
2,019,501	+		CCNA_01879	0.82	-0.5
2,019,527	-		CCNA_01879	0.84	-2.3
2,019,560	-		CCNA_01879	0.87	-1.5
2,019,561	-		CCNA_01879	0.87	+0.2
2,019,571	-		CCNA_01879	0.88	-0.8
2,019,635	-				-2.7
2,019,635	-				-0.8
2,019,637	+				+1.2
2,019,719	-				-2.9
2,019,788	+				-1.2
2,019,833	+				-0.8
2,019,882	-		CCNA_01880	0.14	+1.3
2,019,900	+		CCNA_01880	0.16	-1.4
2,019,932	-		CCNA_01880	0.20	-1.0
2,019,940	+		CCNA_01880	0.22	+2.6
2,019,995	+		CCNA_01880	0.29	-2.7
2,019,998	-		CCNA_01880	0.29	-0.9
2,020,002	+		CCNA_01880	0.30	-0.7
2,020,012	+		CCNA_01880	0.31	+3.6
2,020,020	-		CCNA_01880	0.32	-0.8
2,020,057	-		CCNA_01880	0.37	-0.8
2,020,067	-		CCNA_01880	0.39	-2.1
2,020,067	-		CCNA_01880	0.39	-2.1
2,020,079	+		CCNA_01880	0.40	-0.7
2,020,079	+		CCNA_01880	0.40	-0.8
2,020,092	+		CCNA_01880	0.42	-2.3
2,020,092	+		CCNA_01880	0.42	-0.7
2,020,100	-		CCNA_01880	0.43	-1.0
2,020,100	-		CCNA_01880	0.43	-1.2
2,020,100	-		CCNA_01880	0.43	-0.9
2,020,238	+		CCNA_01880	0.62	-0.4
2,020,246	-		CCNA_01880	0.63	-1.2
2,020,262	+		CCNA_01880	0.65	-0.5
2,020,386	+		CCNA_01880	0.81	-0.1
2,020,388	+		CCNA_01880	0.82	-1.5
2,020,400	-		CCNA_01880	0.83	-0.2
2,020,457	-				+0.5
2,020,478	+				-0.4
2,020,517	+				-1.0
2,020,525	-				+0.3
2,020,526	-				+0.6
2,020,536	-				+0.9
2,020,577	+				-0.0
2,020,577	+				-1.2
2,020,577	+				+1.0
2,020,585	-		CCNA_01881	0.10	-0.8
2,020,585	-		CCNA_01881	0.10	-0.2
2,020,603	-		CCNA_01881	0.13	+0.9
2,020,618	-		CCNA_01881	0.15	+0.5
2,020,645	-		CCNA_01881	0.20	+1.0
2,020,650	-		CCNA_01881	0.20	+0.8