Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01585

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
1,701,385	-		CCNA_01584	0.71	+0.5
1,701,436	+		CCNA_01584	0.73	+1.4
1,701,475	+		CCNA_01584	0.75	+1.9
1,701,475	+		CCNA_01584	0.75	-0.3
1,701,483	-		CCNA_01584	0.75	+1.2
1,701,483	-		CCNA_01584	0.75	+1.7
1,701,483	-		CCNA_01584	0.75	+1.2
1,701,483	-		CCNA_01584	0.75	+0.3
1,701,483	-		CCNA_01584	0.75	+1.6
1,701,507	+		CCNA_01584	0.76	+0.4
1,701,540	+		CCNA_01584	0.78	+1.2
1,701,540	+		CCNA_01584	0.78	-1.2
1,701,549	+		CCNA_01584	0.78	+0.0
1,701,599	+		CCNA_01584	0.80	+2.4
1,701,631	+		CCNA_01584	0.82	-1.9
1,701,639	-		CCNA_01584	0.82	-0.0
1,701,643	+		CCNA_01584	0.82	-0.1
1,701,656	+		CCNA_01584	0.83	+1.4
1,701,657	-		CCNA_01584	0.83	+0.7
1,701,657	-		CCNA_01584	0.83	+1.7
1,701,667	-		CCNA_01584	0.83	+2.2
1,701,717	+		CCNA_01584	0.85	+0.6
1,701,723	+		CCNA_01584	0.85	+0.7
1,701,723	-		CCNA_01584	0.85	+0.6
1,701,725	-		CCNA_01584	0.85	+1.5
1,701,777	-		CCNA_01584	0.88	+1.7
1,701,777	-		CCNA_01584	0.88	+1.8
1,701,796	+		CCNA_01584	0.88	+1.4
1,701,804	-		CCNA_01584	0.89	+1.7
1,701,808	+		CCNA_01584	0.89	+1.4
1,701,809	-		CCNA_01584	0.89	+1.7
1,701,809	-		CCNA_01584	0.89	+2.2
1,701,813	+		CCNA_01584	0.89	-0.2
1,701,818	+		CCNA_01584	0.89	+1.4
1,701,862	-				+0.9
1,701,886	+				-1.6
1,701,886	+				-0.4
1,701,894	-				+1.3
1,701,910	-				+1.3
1,701,957	+				-1.0
1,702,049	-				-0.9
1,702,066	+				+0.1
1,702,066	+				-3.1
1,702,066	+				-0.6
1,702,069	-				+0.6
1,702,072	+				-0.1
1,702,074	-				+0.4
1,702,074	-				-1.4
1,702,074	-				+0.6
1,702,074	-				+0.8
1,702,074	-				+0.3
1,702,074	-				+1.0
1,702,074	-				+1.1
1,702,104	+				+1.7
1,702,122	-				+0.9
1,702,134	+				+1.1
1,702,139	+				-0.7
1,702,186	+				+1.8
1,702,225	+				+1.2
1,702,226	+				+1.8
1,702,226	-				-2.5
1,702,306	-				-0.6
1,702,317	+				+0.4
1,702,325	-				+2.2
1,702,325	-				+0.2
1,702,377	+				-1.2
1,702,415	-				+0.8
1,702,415	-				-0.7
1,702,420	-				+0.5
1,702,429	-				+0.9
1,702,481	-				-0.3
1,702,518	-				-0.0
1,702,546	+				-1.8
1,702,546	+				+0.2
1,702,553	-				-0.3
1,702,601	-		CCNA_01585	0.12	-1.1
1,702,638	+		CCNA_01585	0.14	-1.6
1,702,638	+		CCNA_01585	0.14	-2.1
1,702,638	+		CCNA_01585	0.14	-0.6
1,702,703	-		CCNA_01585	0.17	+0.3
1,702,739	-		CCNA_01585	0.18	-1.1
1,702,740	-		CCNA_01585	0.18	-1.9
1,702,756	+		CCNA_01585	0.19	-2.3
1,702,756	-		CCNA_01585	0.19	-0.6
1,702,761	+		CCNA_01585	0.19	-2.5
1,702,764	-		CCNA_01585	0.20	-0.2
1,702,856	-		CCNA_01585	0.24	-2.1
1,702,880	+		CCNA_01585	0.25	-0.1
1,702,980	+		CCNA_01585	0.30	+0.5
1,702,995	+		CCNA_01585	0.31	+0.4
1,703,021	-		CCNA_01585	0.32	+1.0
1,703,046	+		CCNA_01585	0.33	-2.1
1,703,046	+		CCNA_01585	0.33	-1.4
1,703,046	+		CCNA_01585	0.33	-0.4
1,703,046	+		CCNA_01585	0.33	-0.8
1,703,046	+		CCNA_01585	0.33	+0.4
1,703,046	+		CCNA_01585	0.33	+2.0
1,703,046	+		CCNA_01585	0.33	-0.8
1,703,046	+		CCNA_01585	0.33	-1.3
1,703,046	+		CCNA_01585	0.33	+0.4
1,703,054	-		CCNA_01585	0.34	-1.1
1,703,054	-		CCNA_01585	0.34	+0.4
1,703,054	-		CCNA_01585	0.34	+0.4
1,703,054	-		CCNA_01585	0.34	-1.0
1,703,054	-		CCNA_01585	0.34	-1.6
1,703,054	-		CCNA_01585	0.34	+1.4
1,703,054	-		CCNA_01585	0.34	+0.4
1,703,054	-		CCNA_01585	0.34	-1.9
1,703,067	+		CCNA_01585	0.34	+0.6
1,703,076	-		CCNA_01585	0.35	+2.6
1,703,108	+		CCNA_01585	0.36	-0.5
1,703,141	-		CCNA_01585	0.38	-0.5
1,703,169	+		CCNA_01585	0.39	-0.8
1,703,192	-		CCNA_01585	0.40	-1.1
1,703,200	-		CCNA_01585	0.41	-0.1
1,703,225	+		CCNA_01585	0.42	-0.0
1,703,248	+		CCNA_01585	0.43	-1.8
1,703,260	+		CCNA_01585	0.43	+0.4
1,703,277	-		CCNA_01585	0.44	+2.4
1,703,326	+		CCNA_01585	0.47	-1.5
1,703,429	+		CCNA_01585	0.52	-1.6
1,703,468	+		CCNA_01585	0.53	-1.9
1,703,468	+		CCNA_01585	0.53	-0.8
1,703,481	-		CCNA_01585	0.54	-1.8
1,703,481	-		CCNA_01585	0.54	-3.4
1,703,511	+		CCNA_01585	0.55	-1.4
1,703,534	-		CCNA_01585	0.57	-1.5
1,703,565	+		CCNA_01585	0.58	-1.1
1,703,566	-		CCNA_01585	0.58	-1.4
1,703,581	+		CCNA_01585	0.59	-0.9
1,703,586	+		CCNA_01585	0.59	-0.1
1,703,590	-		CCNA_01585	0.59	-0.9
1,703,596	+		CCNA_01585	0.60	-1.3
1,703,598	+		CCNA_01585	0.60	+1.0
1,703,629	+		CCNA_01585	0.61	+0.1
1,703,629	+		CCNA_01585	0.61	-0.7
1,703,631	+		CCNA_01585	0.61	+0.2
1,703,641	-		CCNA_01585	0.62	-0.4
1,703,653	+		CCNA_01585	0.62	-0.8
1,703,661	-		CCNA_01585	0.63	-1.1
1,703,700	+		CCNA_01585	0.65	-0.2
1,703,700	+		CCNA_01585	0.65	-0.6
1,703,707	+		CCNA_01585	0.65	-0.8
1,703,707	+		CCNA_01585	0.65	-0.4
1,703,707	+		CCNA_01585	0.65	+0.2
1,703,715	-		CCNA_01585	0.65	+1.2
1,703,715	-		CCNA_01585	0.65	-1.6
1,703,715	-		CCNA_01585	0.65	-0.7
1,703,715	-		CCNA_01585	0.65	-2.4
1,703,715	-		CCNA_01585	0.65	-0.5
1,703,715	-		CCNA_01585	0.65	-1.1
1,703,715	-		CCNA_01585	0.65	-1.0
1,703,715	-		CCNA_01585	0.65	-0.9
1,703,715	-		CCNA_01585	0.65	-0.6
1,703,749	-		CCNA_01585	0.67	-0.4
1,703,752	+		CCNA_01585	0.67	-0.4
1,703,752	+		CCNA_01585	0.67	+1.2
1,703,830	-		CCNA_01585	0.71	-1.4
1,703,856	+		CCNA_01585	0.72	-1.8
1,703,856	+		CCNA_01585	0.72	+0.3
1,703,856	+		CCNA_01585	0.72	+0.9
1,703,864	-		CCNA_01585	0.72	+2.0
1,703,864	-		CCNA_01585	0.72	-1.0
1,703,874	-		CCNA_01585	0.73	+0.3
1,703,878	+		CCNA_01585	0.73	+3.5
1,703,905	+		CCNA_01585	0.74	-2.3
1,703,913	-		CCNA_01585	0.75	-1.1
1,703,913	-		CCNA_01585	0.75	+0.3
1,703,928	-		CCNA_01585	0.76	-2.2
1,703,991	-		CCNA_01585	0.79	-2.0
1,704,012	+		CCNA_01585	0.80	-0.4
1,704,020	+		CCNA_01585	0.80	-0.0
1,704,103	-		CCNA_01585	0.84	-1.9
1,704,107	+		CCNA_01585	0.84	-1.0
1,704,114	-		CCNA_01585	0.84	+0.8
1,704,115	-		CCNA_01585	0.84	-0.4
1,704,144	-		CCNA_01585	0.86	-1.6
1,704,165	+		CCNA_01585	0.87	+0.2
1,704,165	-		CCNA_01585	0.87	+0.2
1,704,198	-		CCNA_01585	0.88	-0.7
1,704,259	-				-0.9
1,704,302	-				-2.4
1,704,344	-				+0.2
1,704,347	+				+0.1
1,704,352	+				-1.0
1,704,352	+				+0.1
1,704,352	+				+0.9
1,704,360	-				-0.5
1,704,360	-				-1.7
1,704,360	-				-1.0
1,704,360	-				+1.5
1,704,360	-				+1.8
1,704,384	+				+0.6
1,704,416	+				-0.8
1,704,425	-				-2.0
1,704,460	+				-0.3
1,704,462	+				-2.0
1,704,462	+				-0.4
1,704,463	+				-2.5
1,704,475	-				-1.5
1,704,550	+				-1.2
1,704,553	+				+2.1
1,704,560	+				+0.2
1,704,561	+				+0.3
1,704,564	+				-0.5
1,704,568	-				-1.6
1,704,569	-				-1.6
1,704,569	-				+1.5
1,704,569	-				+2.4
1,704,626	+				+0.2
1,704,626	+				+2.6
1,704,668	+		CCNA_01586	0.11	-1.9
1,704,673	+		CCNA_01586	0.12	+2.6
1,704,683	+		CCNA_01586	0.13	-1.5
1,704,683	+		CCNA_01586	0.13	-1.1
1,704,683	+		CCNA_01586	0.13	-1.0
1,704,683	+		CCNA_01586	0.13	+0.8
1,704,740	+		CCNA_01586	0.21	-0.4
1,704,753	-		CCNA_01586	0.23	-1.3
1,704,835	-		CCNA_01586	0.34	-1.6
1,704,835	-		CCNA_01586	0.34	-2.1
1,704,929	+		CCNA_01586	0.47	+1.5
1,704,941	-		CCNA_01586	0.49	+1.0
1,704,977	-		CCNA_01586	0.54	-1.7
1,704,984	+		CCNA_01586	0.55	-0.6
1,705,001	+		CCNA_01586	0.57	-0.7
1,705,035	+		CCNA_01586	0.62	+1.1
1,705,043	-		CCNA_01586	0.63	-1.7
1,705,043	-		CCNA_01586	0.63	-1.4
1,705,068	+		CCNA_01586	0.67	+0.8
1,705,074	+		CCNA_01586	0.67	-0.4
1,705,074	+		CCNA_01586	0.67	-1.1
1,705,118	+		CCNA_01586	0.73	-0.6
1,705,212	-		CCNA_01586	0.86	+0.1
1,705,249	+				-2.1
1,705,249	+				+0.3
1,705,265	-				-1.5
1,705,275	+				-1.5
1,705,342	+				-2.1
1,705,376	+				+2.5
1,705,377	+				+2.0
1,705,393	-				+1.4
1,705,394	+				+0.2