Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20720

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
5,121,249	+		CA265_RS20715	0.64	-0.4
5,121,300	-		CA265_RS20715	0.66	-0.3
5,121,422	+		CA265_RS20715	0.71	-0.3
5,121,478	-		CA265_RS20715	0.73	-0.2
5,121,534	-		CA265_RS20715	0.76	-0.8
5,121,534	-		CA265_RS20715	0.76	-0.0
5,121,544	+		CA265_RS20715	0.76	-0.0
5,121,544	+		CA265_RS20715	0.76	-1.2
5,121,545	-		CA265_RS20715	0.76	+0.7
5,121,545	-		CA265_RS20715	0.76	-0.8
5,121,545	-		CA265_RS20715	0.76	-0.6
5,121,545	-		CA265_RS20715	0.76	+0.9
5,121,549	-		CA265_RS20715	0.76	-0.3
5,121,643	+		CA265_RS20715	0.80	-0.4
5,121,648	+		CA265_RS20715	0.80	+0.4
5,121,649	-		CA265_RS20715	0.80	+1.4
5,121,743	+		CA265_RS20715	0.84	-0.7
5,121,744	-		CA265_RS20715	0.84	+0.9
5,121,903	+				-1.0
5,121,931	+				-0.4
5,121,933	+				-1.3
5,121,934	-				-0.0
5,121,955	-				+0.7
5,122,009	-				-0.8
5,122,119	-				-0.5
5,122,132	+				-0.3
5,122,135	+				-1.3
5,122,154	-				-0.6
5,122,154	-				-0.2
5,122,200	-				-0.6
5,122,234	-		CA265_RS20720	0.15	+0.2
5,122,355	+		CA265_RS20720	0.33	-0.3
5,122,356	-		CA265_RS20720	0.33	-0.8
5,122,356	-		CA265_RS20720	0.33	-0.7
5,122,356	-		CA265_RS20720	0.33	-2.2
5,122,357	+		CA265_RS20720	0.33	-0.7
5,122,415	+		CA265_RS20720	0.42	+0.7
5,122,416	-		CA265_RS20720	0.42	-0.3
5,122,433	-		CA265_RS20720	0.45	+0.3
5,122,433	-		CA265_RS20720	0.45	+0.6
5,122,434	+		CA265_RS20720	0.45	+0.1
5,122,435	-		CA265_RS20720	0.45	-0.5
5,122,545	+		CA265_RS20720	0.62	+0.5
5,122,670	+		CA265_RS20720	0.81	-0.1
5,122,670	+		CA265_RS20720	0.81	-0.6
5,122,682	+		CA265_RS20720	0.82	-1.8
5,122,682	+		CA265_RS20720	0.82	-0.8
5,122,683	-		CA265_RS20720	0.83	-1.1
5,122,736	-				-0.6
5,122,747	+				+0.2
5,122,747	+				-0.8
5,122,809	+				-1.6
5,122,810	-				-0.1
5,122,810	-				-1.2
5,122,815	-				-1.2
5,122,835	+				-0.9
5,123,079	-		CA265_RS20725	0.43	-1.1
5,123,089	-		CA265_RS20725	0.45	-2.5
5,123,121	+		CA265_RS20725	0.50	-0.4
5,123,122	-		CA265_RS20725	0.50	-0.1
5,123,122	-		CA265_RS20725	0.50	-0.3
5,123,187	+		CA265_RS20725	0.60	+0.0
5,123,187	+		CA265_RS20725	0.60	+0.1
5,123,201	-				-0.3
5,123,256	+		CA265_RS20725	0.70	-1.0
5,123,292	+		CA265_RS20725	0.76	-0.3
5,123,463	-				+0.2
5,123,463	-				+1.0
5,123,468	-				+1.0
5,123,477	-				-0.4
5,123,593	-		CA265_RS20730	0.22	+0.7
5,123,601	-		CA265_RS20730	0.23	-0.4
5,123,624	+		CA265_RS20730	0.26	-0.0
5,123,625	-		CA265_RS20730	0.27	-0.4
5,123,702	-		CA265_RS20730	0.38	-0.2
5,123,748	-		CA265_RS20730	0.45	-0.1
5,123,748	-		CA265_RS20730	0.45	-1.6
5,123,750	-		CA265_RS20730	0.45	-0.7
5,123,750	-		CA265_RS20730	0.45	-0.7