Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18685

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
4,643,950	-				-0.8
4,644,145	+				+0.5
4,644,145	+		CA265_RS18680	0.27	-0.7
4,644,146	-		CA265_RS18680	0.27	-0.9
4,644,146	-		CA265_RS18680	0.27	-1.9
4,644,202	-		CA265_RS18680	0.33	-0.8
4,644,206	+		CA265_RS18680	0.34	+0.4
4,644,277	+		CA265_RS18680	0.42	-1.1
4,644,277	+		CA265_RS18680	0.42	-0.2
4,644,277	+		CA265_RS18680	0.42	+0.1
4,644,296	+		CA265_RS18680	0.44	+1.1
4,644,296	+		CA265_RS18680	0.44	-1.3
4,644,297	-		CA265_RS18680	0.44	-0.3
4,644,342	+		CA265_RS18680	0.49	+0.1
4,644,343	-		CA265_RS18680	0.49	-0.9
4,644,352	-		CA265_RS18680	0.51	+0.4
4,644,370	-		CA265_RS18680	0.53	-1.0
4,644,425	+		CA265_RS18680	0.59	-0.9
4,644,444	+		CA265_RS18680	0.61	-1.1
4,644,489	+		CA265_RS18680	0.66	-0.3
4,644,489	+		CA265_RS18680	0.66	-0.6
4,644,490	-		CA265_RS18680	0.66	-0.5
4,644,547	-		CA265_RS18680	0.73	-0.9
4,644,547	-		CA265_RS18680	0.73	-0.3
4,644,805	-				+0.4
4,644,805	-				+0.1
4,644,814	+				-0.7
4,644,824	+				-2.5
4,644,866	-				-0.9
4,644,866	-				+0.3
4,644,996	-		CA265_RS18685	0.18	-1.5
4,645,029	+		CA265_RS18685	0.23	+0.8
4,645,031	+		CA265_RS18685	0.23	+0.6
4,645,053	-		CA265_RS18685	0.26	-0.4
4,645,075	-		CA265_RS18685	0.29	-1.2
4,645,095	+		CA265_RS18685	0.32	+1.4
4,645,261	-		CA265_RS18685	0.57	-1.2
4,645,278	-		CA265_RS18685	0.60	-1.6
4,645,281	+		CA265_RS18685	0.60	+0.1
4,645,297	+		CA265_RS18685	0.62	-1.0
4,645,332	+		CA265_RS18685	0.68	-1.7
4,645,386	+		CA265_RS18685	0.76	-0.8
4,645,401	+		CA265_RS18685	0.78	-2.8
4,645,410	+		CA265_RS18685	0.79	+0.0
4,645,480	+		CA265_RS18685	0.90	-1.0
4,645,520	-				-2.5
4,645,553	-				+0.2
4,645,601	-				-0.2
4,645,622	-				-0.7
4,645,675	+				+0.1
4,645,703	+				+0.1
4,645,703	+				-0.7
4,645,704	-				-0.6
4,645,704	-				+0.0
4,645,732	+				-0.0
4,645,744	-				+0.3
4,645,808	+				+1.6
4,645,809	-				-0.1
4,645,826	+				+1.1
4,645,827	-				-1.0
4,645,844	+				-0.2
4,645,849	+				+0.3
4,645,868	+		CA265_RS18690	0.11	+1.1
4,645,902	+		CA265_RS18690	0.12	-1.2
4,645,926	+		CA265_RS18690	0.13	-0.1
4,646,102	-		CA265_RS18690	0.22	+0.1
4,646,170	+		CA265_RS18690	0.25	-1.3
4,646,229	-		CA265_RS18690	0.28	-0.1
4,646,231	+		CA265_RS18690	0.28	-0.3
4,646,242	+		CA265_RS18690	0.28	+0.4
4,646,303	+		CA265_RS18690	0.31	+0.6
4,646,333	-		CA265_RS18690	0.32	-2.2
4,646,334	+		CA265_RS18690	0.32	+0.4
4,646,334	+		CA265_RS18690	0.32	+1.1
4,646,492	-		CA265_RS18690	0.40	-0.2
4,646,512	+		CA265_RS18690	0.41	+0.5
4,646,512	+		CA265_RS18690	0.41	-0.9
4,646,513	-		CA265_RS18690	0.41	-1.1