Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18275

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
4,552,898	+				-0.7
4,552,934	+				+0.3
4,552,935	-				-0.2
4,552,935	-				+0.4
4,552,935	-				-0.6
4,552,937	-				-1.3
4,553,002	-				-0.7
4,553,002	-				-1.7
4,553,025	+				+0.6
4,553,026	-				-1.1
4,553,026	-				+2.0
4,553,026	-				-0.5
4,553,053	-				-0.1
4,553,053	-				-1.3
4,553,058	+				+0.1
4,553,058	+				+0.7
4,553,117	-				-0.1
4,553,129	+		CA265_RS18265	0.12	+0.2
4,553,218	+		CA265_RS18265	0.46	-0.8
4,553,302	+		CA265_RS18265	0.78	+0.2
4,553,304	+		CA265_RS18265	0.79	+0.0
4,553,305	-		CA265_RS18265	0.79	-0.6
4,553,311	-		CA265_RS18265	0.81	+0.7
4,553,311	-		CA265_RS18265	0.81	-0.1
4,553,355	-				-0.6
4,553,445	+				-0.2
4,553,447	+				-0.0
4,553,449	+				+0.2
4,553,449	+				+0.2
4,553,456	+				+0.6
4,553,480	-				-0.2
4,553,496	+				+0.2
4,553,581	+		CA265_RS18270	0.36	-0.3
4,553,627	+		CA265_RS18270	0.51	-1.0
4,553,639	+		CA265_RS18270	0.55	+0.0
4,553,640	-		CA265_RS18270	0.55	-0.3
4,553,640	-		CA265_RS18270	0.55	-0.9
4,553,668	+		CA265_RS18270	0.64	+1.0
4,553,802	+				-0.1
4,553,953	+		CA265_RS18275	0.39	+2.0
4,553,953	+		CA265_RS18275	0.39	+1.6
4,553,954	-		CA265_RS18275	0.39	+0.9
4,553,954	-		CA265_RS18275	0.39	-0.5
4,553,954	-		CA265_RS18275	0.39	+1.4
4,553,954	-		CA265_RS18275	0.39	+0.2
4,554,017	+		CA265_RS18275	0.58	+0.8
4,554,021	+				+2.0
4,554,105	+		CA265_RS18275	0.85	-1.2
4,554,167	+				-0.0
4,554,167	+				+0.9
4,554,194	-				-0.4
4,554,396	+		CA265_RS18280	0.16	+0.5
4,554,402	-		CA265_RS18280	0.17	-0.3
4,554,456	+		CA265_RS18280	0.20	+0.1
4,554,510	-		CA265_RS18280	0.23	+0.1
4,554,601	+		CA265_RS18280	0.29	+0.0
4,554,601	+		CA265_RS18280	0.29	+0.4
4,554,601	+		CA265_RS18280	0.29	-0.0
4,554,606	-		CA265_RS18280	0.30	+0.7
4,554,610	+				+2.0
4,554,632	+		CA265_RS18280	0.31	+0.3
4,554,651	-		CA265_RS18280	0.33	-0.5
4,554,683	-		CA265_RS18280	0.35	-0.0
4,554,713	+		CA265_RS18280	0.36	+0.8
4,554,804	+		CA265_RS18280	0.42	-0.5
4,554,849	-		CA265_RS18280	0.45	+0.5
4,554,850	+		CA265_RS18280	0.45	+1.3
4,554,889	+		CA265_RS18280	0.48	+0.8
4,554,926	-		CA265_RS18280	0.50	+0.1
4,554,937	+		CA265_RS18280	0.51	+0.1
4,555,015	+		CA265_RS18280	0.56	-0.3
4,555,016	-		CA265_RS18280	0.56	-0.0
4,555,044	+		CA265_RS18280	0.58	+0.4