Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17955

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
4,485,147	-				-0.5
4,485,148	+				-0.3
4,485,165	+				-2.9
4,485,165	+				+0.3
4,485,165	+				+1.2
4,485,165	+				+0.1
4,485,165	+				-0.7
4,485,208	+				+0.2
4,485,232	+				+0.2
4,485,233	-				+0.8
4,485,261	+				+0.1
4,485,283	+				+0.5
4,485,349	-		CA265_RS17950	0.19	-0.5
4,485,371	-		CA265_RS17950	0.28	-0.0
4,485,374	+		CA265_RS17950	0.30	+0.3
4,485,528	+				+0.9
4,485,554	+				+0.6
4,485,554	+				-0.8
4,485,585	+				+0.2
4,485,586	-				-1.2
4,485,618	+				+0.6
4,485,667	-				-0.6
4,485,732	-				-0.1
4,485,732	-				-0.4
4,485,766	+				+0.4
4,485,776	+				+1.2
4,485,790	+				+0.0
4,485,829	+				+0.6
4,485,892	-				-0.1
4,485,945	+				+0.0
4,485,945	+				+1.0
4,485,945	+				+1.4
4,485,973	-				-0.0
4,485,982	+				-0.4
4,485,984	+				+0.5
4,485,985	-				-0.2
4,485,986	+				-0.4
4,486,028	+				+0.2
4,486,202	+		CA265_RS17955	0.12	+0.1
4,486,250	+		CA265_RS17955	0.16	-0.0
4,486,250	+		CA265_RS17955	0.16	-0.7
4,486,251	-		CA265_RS17955	0.16	-0.6
4,486,251	-		CA265_RS17955	0.16	+1.0
4,486,255	-		CA265_RS17955	0.16	+0.8
4,486,333	-		CA265_RS17955	0.22	+1.8
4,486,365	-		CA265_RS17955	0.25	+1.1
4,486,432	-		CA265_RS17955	0.30	+0.7
4,486,441	-		CA265_RS17955	0.31	+0.6
4,486,481	+		CA265_RS17955	0.34	+0.4
4,486,505	+		CA265_RS17955	0.36	+0.7
4,486,524	+		CA265_RS17955	0.38	+1.1
4,486,628	+		CA265_RS17955	0.46	+0.4
4,486,628	+		CA265_RS17955	0.46	+1.0
4,486,629	-		CA265_RS17955	0.46	+0.6
4,486,632	+		CA265_RS17955	0.46	+0.5
4,486,664	-		CA265_RS17955	0.49	+0.3
4,486,695	+		CA265_RS17955	0.51	+0.8
4,486,723	+		CA265_RS17955	0.54	+0.3
4,486,812	+		CA265_RS17955	0.61	-0.3
4,486,813	-		CA265_RS17955	0.61	+0.8
4,486,816	-		CA265_RS17955	0.61	+0.2
4,486,839	-		CA265_RS17955	0.63	+0.2
4,486,872	+		CA265_RS17955	0.65	+2.3
4,486,933	+		CA265_RS17955	0.70	+1.1
4,486,933	+		CA265_RS17955	0.70	+0.4
4,486,938	-		CA265_RS17955	0.71	+0.5
4,486,941	-		CA265_RS17955	0.71	+0.3
4,487,083	-		CA265_RS17955	0.82	+1.3
4,487,102	+		CA265_RS17955	0.84	-1.5
4,487,130	+		CA265_RS17955	0.86	+1.9
4,487,131	-		CA265_RS17955	0.86	-0.1
4,487,131	-		CA265_RS17955	0.86	-0.7
4,487,152	+		CA265_RS17955	0.88	+0.3
4,487,162	-		CA265_RS17955	0.89	-1.5
4,487,172	-		CA265_RS17955	0.89	+0.9
4,487,181	+				-0.4
4,487,219	-				+0.3
4,487,239	+				+2.8
4,487,240	-				-0.1
4,487,244	+				+0.8
4,487,316	-				-0.5
4,487,337	-				+0.5
4,487,337	-				+0.4
4,487,346	+				+0.2
4,487,370	-				-0.4
4,487,370	-				+0.1
4,487,378	-				-0.6
4,487,378	-				-0.4
4,487,434	+				-0.1
4,487,435	-				-1.0
4,487,438	-				+0.1
4,487,447	+				-0.6
4,487,470	-				-1.1
4,487,489	-				-0.0
4,487,518	+				-0.4
4,487,568	-				-0.8
4,487,568	-				-0.0
4,487,572	-				+0.1
4,487,578	-				+0.3
4,487,621	-		CA265_RS17960	0.11	+0.5
4,487,729	-		CA265_RS17960	0.15	-0.7
4,487,756	-		CA265_RS17960	0.15	-0.3
4,487,764	+		CA265_RS17960	0.16	+0.4
4,487,768	-		CA265_RS17960	0.16	+0.3
4,487,800	-		CA265_RS17960	0.17	-0.7
4,487,935	-		CA265_RS17960	0.22	+0.5
4,487,943	+		CA265_RS17960	0.22	-0.5
4,487,950	-		CA265_RS17960	0.22	+0.7
4,487,950	-		CA265_RS17960	0.22	-0.6
4,487,950	-		CA265_RS17960	0.22	+0.3
4,488,004	-		CA265_RS17960	0.24	+0.2
4,488,010	+		CA265_RS17960	0.24	+0.2
4,488,095	-		CA265_RS17960	0.27	-0.0
4,488,127	+		CA265_RS17960	0.29	+0.1
4,488,151	+		CA265_RS17960	0.29	+0.8
4,488,151	+		CA265_RS17960	0.29	+1.1
4,488,163	+		CA265_RS17960	0.30	+0.7
4,488,216	+		CA265_RS17960	0.32	+0.2
4,488,217	-		CA265_RS17960	0.32	-0.0
4,488,217	-		CA265_RS17960	0.32	+1.3