Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13765

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
3,445,683	-		CA265_RS13760	0.73	-0.2
3,445,712	+		CA265_RS13760	0.75	+0.3
3,445,740	+		CA265_RS13760	0.76	-0.1
3,445,741	-		CA265_RS13760	0.76	-0.9
3,445,741	-		CA265_RS13760	0.76	-1.0
3,445,789	-		CA265_RS13760	0.78	-0.5
3,445,844	-		CA265_RS13760	0.81	-0.8
3,445,881	+		CA265_RS13760	0.83	-0.0
3,445,892	-		CA265_RS13760	0.84	-3.1
3,445,901	+		CA265_RS13760	0.84	-2.2
3,445,948	-		CA265_RS13760	0.86	-0.4
3,446,073	+				-0.2
3,446,074	-				-0.3
3,446,097	+				+0.3
3,446,106	-				-0.5
3,446,119	+				-1.0
3,446,158	-				-0.4
3,446,256	-				+0.8
3,446,350	-				+1.2
3,446,350	-				-0.2
3,446,388	+				+0.1
3,446,389	-				+0.4
3,446,389	-				-0.2
3,446,394	-				-0.7
3,446,462	+				-0.3
3,446,463	-				-1.1
3,446,463	-				+0.9
3,446,463	-				-0.8
3,446,537	+				+0.2
3,446,565	-				-0.7
3,446,605	+				-0.2
3,446,610	-				-1.2
3,446,664	+				-0.4
3,446,664	+				-0.1
3,446,715	+				+0.2
3,446,884	+		CA265_RS13765	0.26	+1.4
3,446,884	+		CA265_RS13765	0.26	+0.6
3,446,885	-		CA265_RS13765	0.26	-0.5
3,446,935	-		CA265_RS13765	0.31	+1.6
3,446,974	+		CA265_RS13765	0.35	+2.2
3,446,976	+		CA265_RS13765	0.35	+0.6
3,446,976	+		CA265_RS13765	0.35	-0.1
3,446,976	+				+0.7
3,446,977	-		CA265_RS13765	0.35	+0.3
3,446,977	-		CA265_RS13765	0.35	-0.2
3,446,986	-		CA265_RS13765	0.36	-0.1
3,446,994	+				+1.4
3,446,995	-		CA265_RS13765	0.37	+0.6
3,447,034	-		CA265_RS13765	0.41	-0.3
3,447,128	+		CA265_RS13765	0.50	+0.1
3,447,141	-		CA265_RS13765	0.52	-0.3
3,447,143	+		CA265_RS13765	0.52	+0.2
3,447,162	+		CA265_RS13765	0.54	-0.9
3,447,162	+		CA265_RS13765	0.54	+0.7
3,447,162	+		CA265_RS13765	0.54	+0.4
3,447,163	-		CA265_RS13765	0.54	+0.2
3,447,164	+		CA265_RS13765	0.54	-0.5
3,447,164	+		CA265_RS13765	0.54	-1.7
3,447,192	+		CA265_RS13765	0.57	+0.3
3,447,207	-		CA265_RS13765	0.58	+0.1
3,447,231	-		CA265_RS13765	0.61	+0.4
3,447,297	+		CA265_RS13765	0.67	-0.5
3,447,418	+		CA265_RS13765	0.79	+0.4
3,447,455	+		CA265_RS13765	0.83	-0.5
3,447,456	-		CA265_RS13765	0.83	+0.9
3,447,456	-		CA265_RS13765	0.83	+0.6
3,447,456	-		CA265_RS13765	0.83	+0.5
3,447,472	-		CA265_RS13765	0.85	-0.3
3,447,472	-		CA265_RS13765	0.85	+0.3
3,447,562	-				-1.0
3,447,605	+				+0.3
3,447,629	-				-0.1
3,447,630	+				-0.9
3,447,630	+				-0.6
3,447,631	-				+0.1
3,447,631	-				-1.2
3,447,743	+				+0.1
3,447,773	-				+0.6
3,447,853	-				+0.6
3,447,861	+				-0.7
3,447,928	-				+0.9
3,448,009	-		CA265_RS13770	0.13	-0.3
3,448,039	-		CA265_RS13770	0.14	-0.2
3,448,072	+		CA265_RS13770	0.15	-0.3
3,448,145	-		CA265_RS13770	0.17	-1.1
3,448,154	+		CA265_RS13770	0.18	-0.3
3,448,155	-		CA265_RS13770	0.18	+1.2
3,448,201	-		CA265_RS13770	0.19	+0.4
3,448,202	+		CA265_RS13770	0.19	+0.2
3,448,221	-		CA265_RS13770	0.20	+0.4
3,448,248	-		CA265_RS13770	0.21	-0.0
3,448,271	-		CA265_RS13770	0.22	+0.4
3,448,353	+		CA265_RS13770	0.24	-1.2
3,448,353	+		CA265_RS13770	0.24	-0.6
3,448,516	-		CA265_RS13770	0.30	-0.0
3,448,580	-		CA265_RS13770	0.32	-1.2