Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12780

Experiment: R2A with Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nalidixic 0.008 mg/ml
3,184,904	+		CA265_RS12775	0.67	-0.3
3,184,905	-		CA265_RS12775	0.67	+0.1
3,184,995	+		CA265_RS12775	0.70	+0.2
3,185,064	+		CA265_RS12775	0.73	-0.3
3,185,065	-		CA265_RS12775	0.73	+0.1
3,185,065	-		CA265_RS12775	0.73	+0.4
3,185,122	+		CA265_RS12775	0.75	-1.4
3,185,170	-		CA265_RS12775	0.77	+0.7
3,185,186	+		CA265_RS12775	0.77	-1.2
3,185,186	+		CA265_RS12775	0.77	-0.7
3,185,186	+		CA265_RS12775	0.77	-0.2
3,185,223	-		CA265_RS12775	0.79	+0.4
3,185,223	-		CA265_RS12775	0.79	-0.5
3,185,226	+		CA265_RS12775	0.79	-0.3
3,185,227	-		CA265_RS12775	0.79	+0.3
3,185,227	-		CA265_RS12775	0.79	+0.1
3,185,227	-		CA265_RS12775	0.79	+0.1
3,185,238	-		CA265_RS12775	0.79	-0.4
3,185,268	+		CA265_RS12775	0.81	+0.1
3,185,272	-		CA265_RS12775	0.81	+0.8
3,185,292	+		CA265_RS12775	0.82	-0.9
3,185,361	-		CA265_RS12775	0.84	-0.5
3,185,469	+		CA265_RS12775	0.88	-1.4
3,185,505	+		CA265_RS12775	0.90	-1.3
3,185,516	+				-1.5
3,185,523	+				-1.9
3,185,524	-				+0.1
3,185,684	+				+0.4
3,185,704	-				-0.5
3,185,771	-				+0.2
3,185,846	-				-1.2
3,185,858	-				-0.8
3,185,902	+				+0.3
3,185,933	-				-0.5
3,186,167	+		CA265_RS12780	0.40	+1.7
3,186,167	+		CA265_RS12780	0.40	+1.5
3,186,167	+		CA265_RS12780	0.40	-0.3
3,186,207	+		CA265_RS12780	0.46	+0.3
3,186,317	-		CA265_RS12780	0.62	-0.6
3,186,538	+				+0.0
3,186,629	+				-0.5
3,186,629	+				+1.3
3,186,647	+		CA265_RS12785	0.12	-0.5
3,186,692	+		CA265_RS12785	0.21	-1.3
3,186,700	+		CA265_RS12785	0.22	+0.3
3,186,700	+		CA265_RS12785	0.22	-0.1
3,186,701	-		CA265_RS12785	0.22	-1.3
3,186,701	-		CA265_RS12785	0.22	+0.1
3,186,701	-		CA265_RS12785	0.22	-0.5
3,186,702	+		CA265_RS12785	0.23	-0.3
3,186,710	+		CA265_RS12785	0.24	-1.9
3,186,711	-		CA265_RS12785	0.24	+0.1
3,186,741	+		CA265_RS12785	0.31	-0.5
3,186,764	-		CA265_RS12785	0.35	-1.3
3,186,767	-		CA265_RS12785	0.36	-0.2
3,186,830	-		CA265_RS12785	0.48	+1.0
3,186,833	-		CA265_RS12785	0.49	-0.9
3,186,833	-		CA265_RS12785	0.49	-0.6
3,186,833	-		CA265_RS12785	0.49	-0.4
3,186,842	+		CA265_RS12785	0.51	-0.6
3,186,964	-		CA265_RS12785	0.75	+0.9
3,186,966	+		CA265_RS12785	0.76	-0.3
3,186,966	+		CA265_RS12785	0.76	-0.3
3,186,994	-		CA265_RS12785	0.81	-0.2
3,186,994	-		CA265_RS12785	0.81	+0.3
3,187,057	+				-1.0
3,187,058	-				-0.7
3,187,097	-				+0.3
3,187,097	-				-0.2
3,187,118	+				-1.5
3,187,165	-				+0.4
3,187,169	-				+0.5
3,187,190	-				-0.1
3,187,248	-				-0.6
3,187,272	-				+1.1
3,187,345	+				-0.8
3,187,382	+				-0.6
3,187,385	+				+0.0
3,187,386	-				-0.3
3,187,467	+		CA265_RS12790	0.15	-1.2
3,187,471	-		CA265_RS12790	0.16	+0.1
3,187,522	+		CA265_RS12790	0.24	-1.2