Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3570 and Ac3H11_3571 are separated by 63 nucleotides Ac3H11_3571 and Ac3H11_3572 overlap by 4 nucleotides Ac3H11_3572 and Ac3H11_3573 overlap by 4 nucleotides Ac3H11_3573 and Ac3H11_3574 are separated by 9 nucleotides
Ac3H11_3570 - Periplasmic molybdate-binding domain, at 125,271 to 126,395
_3570
Ac3H11_3571 - ABC-type tungstate transport system, permease protein, at 126,459 to 127,196
_3571
Ac3H11_3572 - ABC-type tungstate transport system, ATP-binding protein, at 127,193 to 127,921
_3572
Ac3H11_3573 - ABC-type tungstate transport system, periplasmic binding protein, at 127,918 to 128,757
_3573
Ac3H11_3574 - Molybdenum-binding periplasmic protein, at 128,767 to 129,591
_3574
Position (kb) 127
128 Strain fitness (log2 ratio) -2
-1
0
1
2 at 126.256 kb on + strand, within Ac3H11_3570 at 126.257 kb on - strand, within Ac3H11_3570 at 126.257 kb on - strand, within Ac3H11_3570 at 126.373 kb on + strand at 126.373 kb on + strand at 126.373 kb on + strand at 126.373 kb on + strand at 126.374 kb on - strand at 126.405 kb on + strand at 126.405 kb on + strand at 126.430 kb on + strand at 126.464 kb on + strand at 126.464 kb on + strand at 126.464 kb on + strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.465 kb on - strand at 126.702 kb on + strand, within Ac3H11_3571 at 126.702 kb on + strand, within Ac3H11_3571 at 126.703 kb on - strand, within Ac3H11_3571 at 127.817 kb on + strand, within Ac3H11_3572 at 128.254 kb on + strand, within Ac3H11_3573 at 128.254 kb on + strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.506 kb on + strand, within Ac3H11_3573 at 128.506 kb on + strand, within Ac3H11_3573
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 126,256 + Ac3H11_3570 0.88 +0.9 126,257 - Ac3H11_3570 0.88 +0.1 126,257 - Ac3H11_3570 0.88 -0.9 126,373 + -0.4 126,373 + -0.4 126,373 + +0.3 126,373 + -1.0 126,374 - -0.5 126,405 + -0.2 126,405 + +1.6 126,430 + +0.4 126,464 + -0.4 126,464 + +0.1 126,464 + -2.3 126,465 - -0.1 126,465 - +0.7 126,465 - -0.4 126,465 - -0.2 126,465 - -0.8 126,465 - -0.6 126,702 + Ac3H11_3571 0.33 -0.3 126,702 + Ac3H11_3571 0.33 -0.0 126,703 - Ac3H11_3571 0.33 +0.6 127,817 + Ac3H11_3572 0.86 -1.0 128,254 + Ac3H11_3573 0.40 +0.6 128,254 + Ac3H11_3573 0.40 +0.9 128,255 - Ac3H11_3573 0.40 -0.5 128,255 - Ac3H11_3573 0.40 +0.5 128,255 - Ac3H11_3573 0.40 -0.3 128,506 + Ac3H11_3573 0.70 -0.4 128,506 + Ac3H11_3573 0.70 +1.9
Or see this region's nucleotide sequence