Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24085 and AO353_24090 are separated by 826 nucleotides AO353_24090 and AO353_24095 are separated by 155 nucleotides
AO353_24085: AO353_24085 - multidrug transporter, at 5,299,394 to 5,302,531
_24085
AO353_24090: AO353_24090 - DNA-binding protein, at 5,303,358 to 5,303,939
_24090
AO353_24095: AO353_24095 - multidrug DMT transporter permease, at 5,304,095 to 5,304,994
_24095
Position (kb)
5303
5304 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5302.418 kb on + strand at 5302.418 kb on + strand at 5302.419 kb on - strand at 5302.419 kb on - strand at 5302.419 kb on - strand at 5302.419 kb on - strand at 5302.419 kb on - strand at 5302.419 kb on - strand at 5302.450 kb on + strand at 5302.450 kb on + strand at 5302.450 kb on + strand at 5302.451 kb on - strand at 5302.479 kb on + strand at 5302.480 kb on - strand at 5302.480 kb on - strand at 5302.480 kb on - strand at 5302.599 kb on - strand at 5302.759 kb on + strand at 5302.760 kb on - strand at 5302.760 kb on - strand at 5302.760 kb on - strand at 5302.760 kb on - strand at 5302.789 kb on + strand at 5302.789 kb on + strand at 5302.789 kb on + strand at 5302.789 kb on + strand at 5302.789 kb on + strand at 5302.789 kb on + strand at 5302.789 kb on + strand at 5302.790 kb on - strand at 5302.790 kb on - strand at 5302.790 kb on - strand at 5302.790 kb on - strand at 5302.790 kb on - strand at 5302.790 kb on - strand at 5302.790 kb on - strand at 5302.793 kb on + strand at 5302.793 kb on + strand at 5302.793 kb on + strand at 5302.794 kb on - strand at 5302.936 kb on + strand at 5302.993 kb on + strand at 5302.994 kb on - strand at 5303.129 kb on + strand at 5303.129 kb on + strand at 5303.130 kb on - strand at 5303.130 kb on - strand at 5303.235 kb on - strand at 5303.242 kb on + strand at 5303.242 kb on + strand at 5303.243 kb on - strand at 5303.243 kb on - strand at 5303.287 kb on + strand at 5303.287 kb on + strand at 5303.287 kb on + strand at 5303.287 kb on + strand at 5303.287 kb on + strand at 5303.288 kb on - strand at 5303.288 kb on - strand at 5303.288 kb on - strand at 5303.371 kb on - strand at 5303.434 kb on + strand, within AO353_24090 at 5303.435 kb on - strand, within AO353_24090 at 5303.443 kb on + strand, within AO353_24090 at 5303.443 kb on + strand, within AO353_24090 at 5303.444 kb on - strand, within AO353_24090 at 5303.444 kb on - strand, within AO353_24090 at 5303.444 kb on - strand, within AO353_24090 at 5303.444 kb on - strand, within AO353_24090 at 5303.463 kb on + strand, within AO353_24090 at 5303.463 kb on + strand, within AO353_24090 at 5303.463 kb on + strand, within AO353_24090 at 5303.463 kb on + strand, within AO353_24090 at 5303.464 kb on - strand, within AO353_24090 at 5303.464 kb on - strand, within AO353_24090 at 5303.520 kb on + strand, within AO353_24090 at 5303.547 kb on + strand, within AO353_24090 at 5303.548 kb on - strand, within AO353_24090 at 5303.582 kb on - strand, within AO353_24090 at 5303.595 kb on + strand, within AO353_24090 at 5303.595 kb on + strand, within AO353_24090 at 5303.632 kb on + strand, within AO353_24090 at 5303.632 kb on + strand, within AO353_24090 at 5303.632 kb on + strand, within AO353_24090 at 5303.633 kb on - strand, within AO353_24090 at 5303.633 kb on - strand, within AO353_24090 at 5303.633 kb on - strand, within AO353_24090 at 5303.633 kb on - strand, within AO353_24090 at 5303.633 kb on - strand, within AO353_24090 at 5303.633 kb on - strand, within AO353_24090 at 5303.633 kb on - strand, within AO353_24090 at 5303.650 kb on + strand, within AO353_24090 at 5303.650 kb on + strand, within AO353_24090 at 5303.650 kb on + strand, within AO353_24090 at 5303.650 kb on + strand, within AO353_24090 at 5303.650 kb on + strand, within AO353_24090 at 5303.651 kb on - strand, within AO353_24090 at 5303.651 kb on - strand, within AO353_24090 at 5303.651 kb on - strand, within AO353_24090 at 5303.907 kb on - strand at 5303.910 kb on + strand at 5303.910 kb on + strand at 5303.911 kb on - strand at 5303.911 kb on - strand at 5304.015 kb on + strand at 5304.056 kb on + strand at 5304.056 kb on + strand at 5304.056 kb on + strand at 5304.057 kb on - strand at 5304.057 kb on - strand at 5304.057 kb on - strand at 5304.057 kb on - strand at 5304.057 kb on - strand at 5304.057 kb on - strand at 5304.356 kb on + strand, within AO353_24095 at 5304.371 kb on - strand, within AO353_24095 at 5304.392 kb on + strand, within AO353_24095 at 5304.393 kb on - strand, within AO353_24095 at 5304.546 kb on - strand, within AO353_24095 at 5304.587 kb on + strand, within AO353_24095 at 5304.627 kb on + strand, within AO353_24095 at 5304.731 kb on + strand, within AO353_24095 at 5304.732 kb on - strand, within AO353_24095 at 5304.732 kb on - strand, within AO353_24095 at 5304.732 kb on - strand, within AO353_24095 at 5304.782 kb on + strand, within AO353_24095 at 5304.782 kb on + strand, within AO353_24095 at 5304.783 kb on - strand, within AO353_24095 at 5304.783 kb on - strand, within AO353_24095 at 5304.783 kb on - strand, within AO353_24095 at 5304.837 kb on - strand, within AO353_24095
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 5,302,418 + -0.3 5,302,418 + -0.1 5,302,419 - +0.2 5,302,419 - -2.3 5,302,419 - -0.4 5,302,419 - +1.0 5,302,419 - -0.2 5,302,419 - -0.2 5,302,450 + -0.1 5,302,450 + +0.2 5,302,450 + +0.5 5,302,451 - +0.1 5,302,479 + -1.2 5,302,480 - -0.2 5,302,480 - -0.7 5,302,480 - +0.6 5,302,599 - -0.5 5,302,759 + +1.0 5,302,760 - -0.4 5,302,760 - -1.8 5,302,760 - +0.2 5,302,760 - -1.0 5,302,789 + +0.1 5,302,789 + +1.3 5,302,789 + +1.0 5,302,789 + +0.6 5,302,789 + +1.1 5,302,789 + +0.6 5,302,789 + -0.9 5,302,790 - -0.1 5,302,790 - -0.1 5,302,790 - +0.1 5,302,790 - -0.5 5,302,790 - +0.6 5,302,790 - -0.4 5,302,790 - -0.3 5,302,793 + +0.2 5,302,793 + -1.0 5,302,793 + +1.8 5,302,794 - +0.6 5,302,936 + -1.7 5,302,993 + +0.1 5,302,994 - -0.5 5,303,129 + +1.0 5,303,129 + +0.1 5,303,130 - -1.2 5,303,130 - +0.6 5,303,235 - -1.3 5,303,242 + -0.0 5,303,242 + -0.5 5,303,243 - -0.7 5,303,243 - +0.9 5,303,287 + -0.5 5,303,287 + -0.3 5,303,287 + +0.2 5,303,287 + -0.4 5,303,287 + -0.5 5,303,288 - -0.4 5,303,288 - -0.3 5,303,288 - +0.3 5,303,371 - -0.2 5,303,434 + AO353_24090 0.13 +1.8 5,303,435 - AO353_24090 0.13 -0.4 5,303,443 + AO353_24090 0.15 +1.0 5,303,443 + AO353_24090 0.15 +0.3 5,303,444 - AO353_24090 0.15 -0.2 5,303,444 - AO353_24090 0.15 +0.5 5,303,444 - AO353_24090 0.15 +0.6 5,303,444 - AO353_24090 0.15 -0.2 5,303,463 + AO353_24090 0.18 +1.1 5,303,463 + AO353_24090 0.18 +0.1 5,303,463 + AO353_24090 0.18 +0.2 5,303,463 + AO353_24090 0.18 +1.0 5,303,464 - AO353_24090 0.18 +0.6 5,303,464 - AO353_24090 0.18 +0.4 5,303,520 + AO353_24090 0.28 +0.6 5,303,547 + AO353_24090 0.32 +1.3 5,303,548 - AO353_24090 0.33 +0.6 5,303,582 - AO353_24090 0.38 +0.3 5,303,595 + AO353_24090 0.41 +0.4 5,303,595 + AO353_24090 0.41 +0.3 5,303,632 + AO353_24090 0.47 -0.3 5,303,632 + AO353_24090 0.47 +1.2 5,303,632 + AO353_24090 0.47 +1.1 5,303,633 - AO353_24090 0.47 +0.2 5,303,633 - AO353_24090 0.47 +0.9 5,303,633 - AO353_24090 0.47 +1.3 5,303,633 - AO353_24090 0.47 -0.6 5,303,633 - AO353_24090 0.47 -0.7 5,303,633 - AO353_24090 0.47 -0.4 5,303,633 - AO353_24090 0.47 +0.6 5,303,650 + AO353_24090 0.50 -0.9 5,303,650 + AO353_24090 0.50 +0.2 5,303,650 + AO353_24090 0.50 -1.5 5,303,650 + AO353_24090 0.50 -0.8 5,303,650 + AO353_24090 0.50 -0.5 5,303,651 - AO353_24090 0.50 +1.2 5,303,651 - AO353_24090 0.50 -0.2 5,303,651 - AO353_24090 0.50 -0.2 5,303,907 - -0.1 5,303,910 + +0.1 5,303,910 + -0.4 5,303,911 - +0.4 5,303,911 - +0.5 5,304,015 + +0.9 5,304,056 + -0.2 5,304,056 + -0.0 5,304,056 + +0.0 5,304,057 - +0.1 5,304,057 - +0.3 5,304,057 - -1.2 5,304,057 - -0.5 5,304,057 - +0.1 5,304,057 - -0.6 5,304,356 + AO353_24095 0.29 +0.2 5,304,371 - AO353_24095 0.31 -0.4 5,304,392 + AO353_24095 0.33 -0.9 5,304,393 - AO353_24095 0.33 -0.1 5,304,546 - AO353_24095 0.50 +0.1 5,304,587 + AO353_24095 0.55 +0.8 5,304,627 + AO353_24095 0.59 +0.4 5,304,731 + AO353_24095 0.71 -0.1 5,304,732 - AO353_24095 0.71 +0.9 5,304,732 - AO353_24095 0.71 +1.1 5,304,732 - AO353_24095 0.71 -1.5 5,304,782 + AO353_24095 0.76 -0.3 5,304,782 + AO353_24095 0.76 -1.3 5,304,783 - AO353_24095 0.76 +0.5 5,304,783 - AO353_24095 0.76 +0.8 5,304,783 - AO353_24095 0.76 +0.3 5,304,837 - AO353_24095 0.82 +0.1
Or see this region's nucleotide sequence