Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22530

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
4,939,008	+				+1.0
4,939,009	-				-1.4
4,939,009	-				+0.5
4,939,109	+		AO353_22520	0.54	+0.3
4,939,110	-		AO353_22520	0.54	-2.9
4,939,110	-		AO353_22520	0.54	+0.6
4,939,110	-		AO353_22520	0.54	-1.2
4,939,110	-		AO353_22520	0.54	+0.0
4,939,207	+				+0.5
4,939,207	+				+0.1
4,939,207	+				+1.0
4,939,208	-				-1.1
4,939,208	-				-2.0
4,939,208	-				+0.6
4,939,208	-				-0.1
4,939,208	-				+0.5
4,939,254	+				-0.1
4,939,280	+				-0.6
4,939,280	+				+0.4
4,939,280	+				-0.5
4,939,281	-				-0.1
4,939,308	+				-0.3
4,939,308	+				+0.4
4,939,308	+				+0.2
4,939,308	+				-0.2
4,939,308	+				-0.8
4,939,309	-				+0.6
4,939,309	-				-0.4
4,939,309	-				+0.0
4,939,312	+				+0.1
4,939,312	+				+0.2
4,939,312	+				+0.2
4,939,312	+				-1.4
4,939,312	+				+0.4
4,939,312	+				+0.3
4,939,312	+				-0.7
4,939,312	+				-0.6
4,939,313	-				-0.1
4,939,313	-				+0.2
4,939,313	-				+0.1
4,939,313	-				+0.2
4,939,313	-				-0.9
4,939,313	-				-1.8
4,939,313	-				-0.3
4,939,313	-				-0.6
4,939,313	-				-0.8
4,939,313	-				+1.0
4,939,313	-				+0.1
4,939,313	-				-0.9
4,939,347	-				-0.2
4,939,368	+				+1.0
4,939,368	+				-0.1
4,939,368	+				+0.0
4,939,369	-				+0.1
4,939,369	-				-0.4
4,939,369	-				+1.1
4,939,380	+				-0.6
4,939,381	-				-0.4
4,939,381	-				-0.6
4,939,391	+				-0.3
4,939,448	+				-0.2
4,939,448	+				-0.6
4,939,448	+				-0.5
4,939,448	+				-0.9
4,939,448	+				-0.3
4,939,449	-				+0.9
4,939,456	+				-1.0
4,939,456	+				-0.4
4,939,456	+				+0.8
4,939,456	+				-1.5
4,939,456	+				+0.3
4,939,505	+				+0.4
4,939,505	+				-0.5
4,939,505	+				+0.6
4,939,505	+				-0.2
4,939,505	+				+0.9
4,939,505	+				+0.2
4,939,506	-				+0.8
4,939,506	-				-1.3
4,939,506	-				-0.7
4,939,506	-				-0.2
4,939,516	+		AO353_22525	0.13	-0.5
4,939,516	+		AO353_22525	0.13	+0.3
4,939,516	+		AO353_22525	0.13	-1.2
4,939,516	+		AO353_22525	0.13	+0.8
4,939,516	+		AO353_22525	0.13	-0.2
4,939,516	+		AO353_22525	0.13	+0.0
4,939,516	+		AO353_22525	0.13	+0.4
4,939,516	+		AO353_22525	0.13	-0.1
4,939,517	-		AO353_22525	0.13	+0.3
4,939,517	-		AO353_22525	0.13	-0.2
4,939,517	-		AO353_22525	0.13	+0.2
4,939,517	-		AO353_22525	0.13	-1.4
4,939,517	-		AO353_22525	0.13	+0.1
4,939,517	-		AO353_22525	0.13	+0.1
4,939,517	-		AO353_22525	0.13	+0.6
4,939,517	-		AO353_22525	0.13	-0.9
4,939,579	+		AO353_22525	0.37	+0.2
4,939,580	-		AO353_22525	0.37	-1.2
4,939,580	-		AO353_22525	0.37	+2.5
4,939,580	-		AO353_22525	0.37	+0.5
4,939,591	+		AO353_22525	0.41	-0.7
4,939,591	+		AO353_22525	0.41	-0.3
4,939,591	+		AO353_22525	0.41	-0.1
4,939,592	-		AO353_22525	0.42	+0.3
4,939,592	-		AO353_22525	0.42	-0.7
4,939,592	-		AO353_22525	0.42	+0.5
4,939,592	-		AO353_22525	0.42	+0.0
4,939,592	-		AO353_22525	0.42	-1.0
4,939,592	-		AO353_22525	0.42	-0.1
4,939,592	-		AO353_22525	0.42	-0.9
4,939,592	-		AO353_22525	0.42	-0.1
4,939,648	+		AO353_22525	0.63	-0.4
4,939,648	+		AO353_22525	0.63	-0.3
4,939,648	+		AO353_22525	0.63	+1.3
4,939,648	+		AO353_22525	0.63	+0.4
4,939,649	-		AO353_22525	0.63	-0.9
4,939,649	-		AO353_22525	0.63	-0.7
4,939,649	-		AO353_22525	0.63	-0.4
4,939,743	+				+0.1
4,939,807	+				-0.9
4,939,807	+				-0.1
4,939,808	-				+0.0
4,939,808	-				+0.2
4,939,825	+				-0.7
4,939,825	+				-0.5
4,939,826	-				+0.4
4,939,826	-				+0.0
4,939,839	-				-0.9
4,939,848	+				-0.0
4,939,890	+				-0.1
4,939,959	+				-0.4
4,939,959	+				-0.5
4,939,960	-				+1.8
4,939,960	-				-1.7
4,939,960	-				+1.2
4,940,032	-				+0.4
4,940,032	-				+0.2
4,940,118	+		AO353_22530	0.42	+1.5
4,940,118	+		AO353_22530	0.42	-1.2
4,940,133	+		AO353_22530	0.47	+1.3
4,940,134	-		AO353_22530	0.48	+0.6
4,940,179	+		AO353_22530	0.65	+2.0
4,940,179	+		AO353_22530	0.65	+0.1
4,940,179	+		AO353_22530	0.65	+1.1
4,940,180	-		AO353_22530	0.65	+0.3
4,940,180	-		AO353_22530	0.65	-0.1
4,940,249	+				-0.1
4,940,250	-				-0.9
4,940,294	-				-0.0
4,940,294	-				+0.8
4,940,294	-				+0.5
4,940,329	+				+0.8
4,940,329	+				+0.2
4,940,330	-				+0.4
4,940,330	-				-0.0
4,940,374	+				+0.1
4,940,374	+				-0.2
4,940,374	+				-0.6
4,940,375	-				-1.7
4,940,375	-				+1.2
4,940,395	-				-0.1
4,940,396	+				-0.4
4,940,396	+				+0.6
4,940,396	+				-1.3
4,940,396	+				-1.7
4,940,396	+				+0.4
4,940,396	+				-0.9
4,940,396	+				+0.3
4,940,396	+				-0.0
4,940,396	+				+0.3
4,940,397	-				+0.9
4,940,397	-				-0.8
4,940,397	-				+0.1
4,940,441	+				+0.2
4,940,441	+				+2.8
4,940,441	+				-0.5
4,940,442	-				-0.1
4,940,461	-				+1.4
4,940,461	-				-1.0
4,940,461	-				-0.0
4,940,464	+				+0.3
4,940,464	+				-2.6
4,940,464	+				+0.4
4,940,464	+				+0.1
4,940,464	+				+1.0
4,940,465	-				-0.1
4,940,465	-				+0.5
4,940,465	-				+0.2
4,940,465	-				+0.1
4,940,465	-				-0.6
4,940,465	-				-0.1
4,940,465	-				-0.3
4,940,465	-				+0.1
4,940,465	-				-0.6
4,940,480	+				+0.0
4,940,535	+				-1.3
4,940,535	+				+0.7
4,940,564	+				-0.1
4,940,564	+				-0.3
4,940,564	+				-0.7
4,940,564	+				+1.8
4,940,565	-				-0.6
4,940,565	-				+0.0
4,940,565	-				-0.1
4,940,565	-				+0.1
4,940,565	-				-0.3
4,940,565	-				+0.9
4,940,565	-				+0.8
4,940,565	-				+1.4
4,940,565	-				+0.3
4,940,565	-				+1.8
4,940,622	-		AO353_22535	0.18	+0.4
4,940,622	-		AO353_22535	0.18	+0.0
4,940,696	+		AO353_22535	0.30	+0.4
4,940,696	+		AO353_22535	0.30	+0.2
4,940,696	+		AO353_22535	0.30	+0.1
4,940,696	+		AO353_22535	0.30	-1.1
4,940,696	+		AO353_22535	0.30	-1.9
4,940,696	+		AO353_22535	0.30	+0.1
4,940,696	+		AO353_22535	0.30	+0.0
4,940,697	-		AO353_22535	0.30	+0.5
4,940,697	-		AO353_22535	0.30	-1.7
4,940,697	-		AO353_22535	0.30	+0.1
4,940,697	-		AO353_22535	0.30	+0.2
4,940,697	-		AO353_22535	0.30	-0.0
4,940,698	+		AO353_22535	0.30	-0.3
4,940,699	-		AO353_22535	0.30	-0.3
4,940,699	-		AO353_22535	0.30	+0.1
4,940,699	-		AO353_22535	0.30	-0.2
4,940,699	-		AO353_22535	0.30	+0.2
4,940,727	-		AO353_22535	0.35	-0.0
4,940,739	+		AO353_22535	0.37	+0.6
4,940,863	+		AO353_22535	0.58	+0.1
4,940,863	+		AO353_22535	0.58	-1.5
4,940,863	+		AO353_22535	0.58	+0.0
4,940,863	+		AO353_22535	0.58	+0.7
4,940,863	+		AO353_22535	0.58	-0.6
4,940,863	+		AO353_22535	0.58	-0.7
4,940,863	+		AO353_22535	0.58	+0.6
4,940,864	-		AO353_22535	0.58	-1.4
4,940,864	-		AO353_22535	0.58	+1.0
4,940,875	+		AO353_22535	0.60	-1.0
4,940,876	-		AO353_22535	0.60	-1.0
4,940,876	-		AO353_22535	0.60	+0.3
4,940,876	-		AO353_22535	0.60	+0.2
4,940,924	+		AO353_22535	0.68	-1.9
4,940,924	+		AO353_22535	0.68	-0.0
4,940,924	+		AO353_22535	0.68	-1.4
4,940,924	+		AO353_22535	0.68	-1.4
4,940,924	+		AO353_22535	0.68	-1.4
4,940,925	-		AO353_22535	0.68	+1.4
4,940,950	-		AO353_22535	0.72	-1.2
4,940,995	-		AO353_22535	0.79	+1.8
4,941,005	-		AO353_22535	0.81	+1.2
4,941,005	-		AO353_22535	0.81	+0.9
4,941,084	+				-0.2
4,941,085	-				+0.9
4,941,085	-				-1.5
4,941,114	+				-0.3
4,941,114	+				-0.6
4,941,114	+				+0.0
4,941,114	+				-0.7
4,941,114	+				+0.3
4,941,115	-				-0.3
4,941,116	+				-0.5
4,941,159	-				+0.4
4,941,163	+				+0.2
4,941,163	+				+0.1
4,941,163	+				-1.1
4,941,164	-				-1.0
4,941,164	-				+0.4
4,941,172	-				+0.1
4,941,172	-				-0.6
4,941,177	+				-0.4
4,941,177	+				-1.0
4,941,177	+				-0.1
4,941,177	+				-0.2
4,941,246	+				+0.7
4,941,246	+				-0.2
4,941,246	+				+0.9
4,941,247	-				+0.2
4,941,247	-				+0.3
4,941,247	-				+1.0
4,941,247	-				-0.9