Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15660

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
3,462,889	+		AO353_15650	0.14	+0.3
3,463,105	+		AO353_15650	0.63	+0.4
3,463,105	+		AO353_15650	0.63	-1.4
3,463,105	+		AO353_15650	0.63	+0.0
3,463,105	+		AO353_15650	0.63	-0.5
3,463,106	-		AO353_15650	0.63	-1.4
3,463,106	-		AO353_15650	0.63	-1.9
3,463,106	-		AO353_15650	0.63	+0.6
3,463,106	-		AO353_15650	0.63	+0.4
3,463,106	-		AO353_15650	0.63	-0.7
3,463,144	+		AO353_15650	0.72	+1.0
3,463,144	+		AO353_15650	0.72	-0.3
3,463,145	-		AO353_15650	0.72	+0.9
3,463,171	+		AO353_15650	0.78	-0.3
3,463,172	-		AO353_15650	0.78	-0.5
3,463,172	-		AO353_15650	0.78	-0.2
3,463,268	+				-0.6
3,463,268	+				-1.3
3,463,268	+				-0.1
3,463,268	+				+0.7
3,463,268	+				+0.3
3,463,268	+				+0.4
3,463,268	+				+0.3
3,463,268	+				+1.0
3,463,268	+				+0.1
3,463,269	-				-0.8
3,463,269	-				+0.1
3,463,269	-				+0.7
3,463,269	-				-0.4
3,463,269	-				-0.1
3,463,269	-				+0.6
3,463,269	-				-0.1
3,463,278	+				+0.7
3,463,279	-				+0.2
3,463,370	+		AO353_15655	0.12	+0.1
3,463,370	+		AO353_15655	0.12	-0.0
3,463,370	+		AO353_15655	0.12	+0.3
3,463,370	+		AO353_15655	0.12	-0.3
3,463,370	+		AO353_15655	0.12	-0.9
3,463,370	+		AO353_15655	0.12	+1.1
3,463,371	-		AO353_15655	0.13	-1.0
3,463,371	-		AO353_15655	0.13	+1.0
3,463,371	-		AO353_15655	0.13	+0.2
3,463,371	-		AO353_15655	0.13	-0.9
3,463,371	-		AO353_15655	0.13	+0.6
3,463,371	-		AO353_15655	0.13	-0.0
3,463,371	-		AO353_15655	0.13	-0.6
3,463,371	-		AO353_15655	0.13	+0.5
3,463,371	-		AO353_15655	0.13	+1.0
3,463,371	-		AO353_15655	0.13	-0.2
3,463,377	+		AO353_15655	0.14	+0.7
3,463,378	-		AO353_15655	0.14	-0.7
3,463,493	+		AO353_15655	0.43	-0.3
3,463,493	+		AO353_15655	0.43	+1.0
3,463,493	+		AO353_15655	0.43	-0.4
3,463,493	+		AO353_15655	0.43	-0.4
3,463,493	+		AO353_15655	0.43	-0.8
3,463,494	-		AO353_15655	0.43	+0.4
3,463,494	-		AO353_15655	0.43	+1.5
3,463,494	-		AO353_15655	0.43	-0.2
3,463,494	-		AO353_15655	0.43	+0.8
3,463,494	-		AO353_15655	0.43	-0.0
3,463,494	-		AO353_15655	0.43	-1.3
3,463,494	-		AO353_15655	0.43	-0.6
3,463,494	-		AO353_15655	0.43	+0.2
3,463,592	+		AO353_15655	0.68	-2.0
3,463,746	-				+0.6
3,463,749	+				+0.0
3,463,749	+				-0.2
3,463,749	+				-1.2
3,463,749	+				-0.2
3,463,749	+				+0.7
3,463,749	+				-0.5
3,463,749	+				-0.3
3,463,749	+				-0.6
3,463,749	+				+0.9
3,463,749	+				-0.1
3,463,750	-				+1.2
3,463,750	-				-1.7
3,463,750	-				-0.9
3,463,750	-				+0.4
3,463,750	-				-0.6
3,463,750	-				-0.2
3,463,750	-				-0.0
3,463,750	-				-0.3
3,463,750	-				-0.3
3,463,750	-				+1.7
3,463,750	-				+0.2
3,463,750	-				-0.2
3,463,750	-				+0.0
3,463,750	-				-1.1
3,463,751	+				+0.7
3,463,751	+				+1.3
3,463,751	+				-0.6
3,463,751	+				+2.0
3,463,751	+				+0.3
3,463,751	+				-0.5
3,463,752	-				+1.0
3,463,752	-				-0.7
3,463,752	-				-0.4
3,463,752	-				+0.9
3,463,752	-				+1.1
3,463,752	-				-1.3
3,463,756	+				-1.7
3,463,756	+				-1.2
3,463,758	+				-0.4
3,463,758	+				-0.2
3,463,758	+				-0.5
3,463,758	+				-0.4
3,463,758	+				+0.6
3,463,758	+				-0.2
3,463,759	-				-2.5
3,463,759	-				+1.3
3,463,759	-				-0.0
3,463,759	-				+1.3
3,463,759	-				-0.4
3,463,759	-				-0.8
3,463,759	-				-1.6
3,463,759	-				+1.6
3,463,759	-				-0.2
3,463,759	-				+1.1
3,463,765	+				-0.8
3,463,765	+				-1.2
3,463,765	+				-0.4
3,463,765	+				+0.4
3,463,765	+				+0.6
3,463,765	+				-1.1
3,463,765	+				-0.3
3,463,765	+				+0.1
3,463,765	+				+0.7
3,463,765	+				-0.2
3,463,765	+				+0.6
3,463,766	-				-0.0
3,463,766	-				-1.0
3,463,766	-				-1.0
3,463,766	-				-1.6
3,463,766	-				-1.7
3,463,766	-				+0.1
3,463,766	-				+0.6
3,463,766	-				-1.1
3,463,766	-				+0.6
3,463,766	-				+0.4
3,463,766	-				-0.4
3,463,766	-				-0.0
3,463,766	-				-0.3
3,463,817	+				-0.5
3,463,817	+				-0.2
3,463,817	+				+0.4
3,463,818	-				-0.8
3,463,818	-				-1.0
3,463,818	-				+1.0
3,463,818	-				-0.1
3,463,818	-				+0.3
3,463,818	-				-0.1
3,463,989	+		AO353_15660	0.42	-1.3
3,463,989	+		AO353_15660	0.42	-0.8
3,463,989	+		AO353_15660	0.42	-0.9
3,463,990	-		AO353_15660	0.43	-0.5
3,463,990	-		AO353_15660	0.43	+0.1
3,463,990	-		AO353_15660	0.43	+0.2
3,463,990	-		AO353_15660	0.43	-0.7
3,463,990	-		AO353_15660	0.43	-1.5
3,464,001	+		AO353_15660	0.47	+0.9
3,464,002	-		AO353_15660	0.48	-0.9
3,464,154	+				-0.3
3,464,154	+				-0.3
3,464,154	+				+0.5
3,464,154	+				-0.9
3,464,155	-				+0.5
3,464,155	-				+0.1
3,464,155	-				+1.4
3,464,155	-				-0.5
3,464,232	-				-0.7
3,464,232	-				-1.0
3,464,263	+				-0.7
3,464,263	+				-0.5
3,464,263	+				-0.6
3,464,263	+				+1.7
3,464,263	+				-1.0
3,464,263	+				+1.8
3,464,263	+				+0.4
3,464,263	+				+0.6
3,464,263	+				+0.0
3,464,263	+				-0.4
3,464,263	+				+0.9
3,464,264	-				-0.5
3,464,264	-				+1.0
3,464,264	-				+0.4
3,464,264	-				+1.4
3,464,264	-				+0.3
3,464,264	-				+0.2
3,464,264	-				-0.4
3,464,264	-				+0.3
3,464,264	-				+0.6
3,464,264	-				+0.2
3,464,264	-				-1.9
3,464,264	-				-1.5
3,464,264	-				+0.1
3,464,264	-				-1.0
3,464,265	+				-1.0
3,464,265	+				-0.7
3,464,265	+				+0.4
3,464,266	-				-0.9
3,464,266	-				-0.6
3,464,290	+				+0.8
3,464,290	+				-0.5
3,464,290	+				+0.3
3,464,290	+				-1.8
3,464,290	+				+0.4
3,464,291	-				+1.6
3,464,291	-				+1.3
3,464,291	-				+0.3
3,464,291	-				-1.0
3,464,291	-				-0.0
3,464,291	-				+0.0
3,464,291	-				+0.3
3,464,291	-				-0.0
3,464,291	-				-0.4
3,464,313	+				-1.6
3,464,313	+				-1.1
3,464,313	+				+1.7
3,464,313	+				-0.0
3,464,313	+				-0.4
3,464,313	+				-0.6
3,464,314	-				+0.1
3,464,314	-				+0.3
3,464,314	-				-0.7
3,464,314	-				+1.5
3,464,314	-				-1.8
3,464,314	-				-0.0
3,464,403	+		AO353_15665	0.11	-0.4
3,464,619	+		AO353_15665	0.41	-0.1
3,464,620	-		AO353_15665	0.41	-1.3
3,464,872	+		AO353_15665	0.77	-0.6
3,464,872	+		AO353_15665	0.77	+1.4
3,464,873	-		AO353_15665	0.77	+0.5
3,464,873	-		AO353_15665	0.77	-0.7
3,464,958	+		AO353_15665	0.89	+0.1
3,464,958	+		AO353_15665	0.89	+0.3
3,464,958	+		AO353_15665	0.89	+1.2
3,465,121	+				+1.1
3,465,121	+				+0.1
3,465,121	+				+0.9
3,465,121	+				-0.5
3,465,121	+				-0.2
3,465,121	+				+0.2
3,465,121	+				+1.0
3,465,121	+				-0.4
3,465,121	+				-0.3
3,465,121	+				-0.6
3,465,121	+				+1.4
3,465,121	+				-0.7
3,465,121	+				+0.0
3,465,121	+				+0.1
3,465,121	+				-0.7
3,465,121	+				+0.7
3,465,121	+				+1.1
3,465,122	-				-0.6
3,465,122	-				+1.1
3,465,122	-				-0.3
3,465,122	-				+1.5
3,465,122	-				-0.3
3,465,122	-				+0.2
3,465,122	-				+1.1
3,465,122	-				-0.7