Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02195 and AO353_02200 are separated by 264 nucleotides AO353_02200 and AO353_02205 are separated by 88 nucleotides AO353_02205 and AO353_02210 are separated by 241 nucleotides AO353_02210 and AO353_02215 are separated by 97 nucleotides
AO353_02195: AO353_02195 - spermidine synthase, at 471,965 to 472,840
_02195
AO353_02200: AO353_02200 - hypothetical protein, at 473,105 to 473,296
_02200
AO353_02205: AO353_02205 - hypothetical protein, at 473,385 to 473,915
_02205
AO353_02210: AO353_02210 - hypothetical protein, at 474,157 to 474,675
_02210
AO353_02215: AO353_02215 - long-chain acyl-CoA synthetase, at 474,773 to 476,611
_02215
Position (kb) 473
474 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 472.647 kb on + strand, within AO353_02195 at 472.647 kb on + strand, within AO353_02195 at 472.648 kb on - strand, within AO353_02195 at 472.648 kb on - strand, within AO353_02195 at 472.648 kb on - strand, within AO353_02195 at 472.816 kb on - strand at 472.944 kb on + strand at 472.944 kb on + strand at 472.944 kb on + strand at 472.945 kb on - strand at 472.945 kb on - strand at 472.990 kb on + strand at 472.990 kb on + strand at 472.990 kb on + strand at 472.991 kb on - strand at 473.000 kb on + strand at 473.084 kb on + strand at 473.084 kb on + strand at 473.107 kb on - strand at 473.107 kb on - strand at 473.114 kb on + strand at 473.114 kb on + strand at 473.114 kb on + strand at 473.114 kb on + strand at 473.114 kb on + strand at 473.114 kb on + strand at 473.114 kb on + strand at 473.114 kb on + strand at 473.114 kb on + strand at 473.115 kb on - strand at 473.115 kb on - strand at 473.115 kb on - strand at 473.115 kb on - strand at 473.115 kb on - strand at 473.115 kb on - strand at 473.115 kb on - strand at 473.115 kb on - strand at 473.146 kb on + strand, within AO353_02200 at 473.146 kb on + strand, within AO353_02200 at 473.146 kb on + strand, within AO353_02200 at 473.147 kb on - strand, within AO353_02200 at 473.221 kb on + strand, within AO353_02200 at 473.221 kb on + strand, within AO353_02200 at 473.221 kb on + strand, within AO353_02200 at 473.221 kb on + strand, within AO353_02200 at 473.222 kb on - strand, within AO353_02200 at 473.222 kb on - strand, within AO353_02200 at 473.222 kb on - strand, within AO353_02200 at 473.222 kb on - strand, within AO353_02200 at 473.245 kb on + strand, within AO353_02200 at 473.246 kb on - strand, within AO353_02200 at 473.360 kb on + strand at 473.361 kb on - strand at 473.363 kb on + strand at 473.387 kb on - strand at 473.482 kb on + strand, within AO353_02205 at 473.483 kb on - strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.689 kb on + strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.690 kb on - strand, within AO353_02205 at 473.733 kb on + strand, within AO353_02205 at 473.734 kb on - strand, within AO353_02205 at 473.773 kb on + strand, within AO353_02205 at 473.773 kb on + strand, within AO353_02205 at 473.774 kb on - strand, within AO353_02205 at 473.774 kb on - strand, within AO353_02205 at 473.818 kb on + strand, within AO353_02205 at 473.818 kb on + strand, within AO353_02205 at 473.818 kb on + strand, within AO353_02205 at 473.819 kb on - strand, within AO353_02205 at 474.057 kb on + strand at 474.076 kb on + strand at 474.076 kb on + strand at 474.076 kb on + strand at 474.077 kb on - strand at 474.083 kb on + strand at 474.083 kb on + strand at 474.083 kb on + strand at 474.083 kb on + strand at 474.083 kb on + strand at 474.084 kb on - strand at 474.084 kb on - strand at 474.084 kb on - strand at 474.278 kb on + strand, within AO353_02210 at 474.279 kb on - strand, within AO353_02210 at 474.710 kb on + strand at 474.710 kb on + strand at 474.710 kb on + strand at 474.809 kb on + strand at 474.809 kb on + strand at 474.810 kb on - strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.831 kb on + strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.832 kb on - strand at 474.858 kb on + strand at 474.858 kb on + strand at 474.858 kb on + strand at 474.858 kb on + strand at 474.858 kb on + strand at 474.858 kb on + strand at 474.858 kb on + strand at 474.858 kb on + strand at 474.859 kb on - strand at 474.859 kb on - strand at 474.859 kb on - strand at 474.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 472,647 + AO353_02195 0.78 -1.0 472,647 + AO353_02195 0.78 -0.8 472,648 - AO353_02195 0.78 -1.1 472,648 - AO353_02195 0.78 +0.6 472,648 - AO353_02195 0.78 -0.2 472,816 - +0.3 472,944 + -0.2 472,944 + -0.2 472,944 + +0.3 472,945 - -1.2 472,945 - -0.4 472,990 + +0.9 472,990 + -0.3 472,990 + +0.5 472,991 - +1.8 473,000 + -0.1 473,084 + -1.2 473,084 + +0.2 473,107 - +1.0 473,107 - -0.6 473,114 + +0.3 473,114 + -0.0 473,114 + +0.2 473,114 + +0.7 473,114 + -1.0 473,114 + +0.8 473,114 + +0.2 473,114 + -2.0 473,114 + -0.8 473,115 - +0.4 473,115 - +1.3 473,115 - -0.2 473,115 - -0.0 473,115 - +0.3 473,115 - +1.2 473,115 - +0.3 473,115 - +0.5 473,146 + AO353_02200 0.21 +0.5 473,146 + AO353_02200 0.21 +0.6 473,146 + AO353_02200 0.21 -0.8 473,147 - AO353_02200 0.22 +0.9 473,221 + AO353_02200 0.60 -0.4 473,221 + AO353_02200 0.60 +0.5 473,221 + AO353_02200 0.60 +1.0 473,221 + AO353_02200 0.60 -0.4 473,222 - AO353_02200 0.61 +1.9 473,222 - AO353_02200 0.61 +1.7 473,222 - AO353_02200 0.61 -0.2 473,222 - AO353_02200 0.61 -0.3 473,245 + AO353_02200 0.73 -0.4 473,246 - AO353_02200 0.73 -0.8 473,360 + -1.0 473,361 - -0.9 473,363 + +0.3 473,387 - -0.1 473,482 + AO353_02205 0.18 +1.0 473,483 - AO353_02205 0.18 +0.4 473,689 + AO353_02205 0.57 -1.0 473,689 + AO353_02205 0.57 -1.9 473,689 + AO353_02205 0.57 -0.5 473,689 + AO353_02205 0.57 +0.8 473,689 + AO353_02205 0.57 -0.5 473,689 + AO353_02205 0.57 +0.7 473,689 + AO353_02205 0.57 +0.1 473,689 + AO353_02205 0.57 +3.6 473,689 + AO353_02205 0.57 -0.3 473,689 + AO353_02205 0.57 +0.6 473,690 - AO353_02205 0.57 +0.1 473,690 - AO353_02205 0.57 +0.0 473,690 - AO353_02205 0.57 +0.2 473,690 - AO353_02205 0.57 -0.2 473,690 - AO353_02205 0.57 +2.0 473,690 - AO353_02205 0.57 +0.1 473,690 - AO353_02205 0.57 +1.0 473,690 - AO353_02205 0.57 -0.2 473,690 - AO353_02205 0.57 +1.2 473,690 - AO353_02205 0.57 -0.7 473,733 + AO353_02205 0.66 -1.9 473,734 - AO353_02205 0.66 +1.0 473,773 + AO353_02205 0.73 -1.2 473,773 + AO353_02205 0.73 -0.3 473,774 - AO353_02205 0.73 +0.0 473,774 - AO353_02205 0.73 +0.5 473,818 + AO353_02205 0.82 +0.3 473,818 + AO353_02205 0.82 -0.4 473,818 + AO353_02205 0.82 +1.3 473,819 - AO353_02205 0.82 -1.1 474,057 + +0.2 474,076 + +1.2 474,076 + +0.4 474,076 + +1.2 474,077 - -0.4 474,083 + -0.9 474,083 + +0.0 474,083 + -0.8 474,083 + -0.0 474,083 + -0.0 474,084 - +0.3 474,084 - -0.4 474,084 - +0.8 474,278 + AO353_02210 0.23 +1.7 474,279 - AO353_02210 0.24 +0.0 474,710 + -1.6 474,710 + -0.4 474,710 + -0.7 474,809 + -1.1 474,809 + +0.3 474,810 - +0.6 474,831 + -0.8 474,831 + -1.0 474,831 + -0.4 474,831 + +2.0 474,831 + +1.0 474,831 + -0.8 474,831 + -0.2 474,831 + -0.5 474,831 + +0.0 474,831 + -0.5 474,831 + -1.0 474,831 + +1.0 474,831 + +0.2 474,831 + +0.5 474,831 + +1.3 474,831 + +2.3 474,832 - +0.7 474,832 - +1.2 474,832 - +0.2 474,832 - +0.3 474,832 - +0.0 474,832 - +0.6 474,832 - +1.3 474,832 - +0.3 474,832 - -0.9 474,832 - +0.9 474,832 - -0.8 474,832 - +0.7 474,832 - -0.5 474,832 - +0.5 474,832 - +0.2 474,832 - +0.3 474,832 - +0.2 474,832 - -0.3 474,832 - +0.8 474,832 - +0.9 474,832 - +0.4 474,832 - +0.8 474,832 - -0.7 474,858 + +1.0 474,858 + +0.6 474,858 + -0.5 474,858 + +0.3 474,858 + +0.8 474,858 + +0.6 474,858 + +1.2 474,858 + +1.6 474,859 - +0.6 474,859 - +0.1 474,859 - -0.4 474,859 - -0.1
Or see this region's nucleotide sequence