Strain Fitness in Pantoea sp. MT58 around IAI47_16330

Experiment: copper (II) chloride 2 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 uM, anaerobic
3,461,526	+		IAI47_16325	0.44	-0.5
3,461,526	+		IAI47_16325	0.44	+0.0
3,461,526	+		IAI47_16325	0.44	-0.1
3,461,526	+		IAI47_16325	0.44	-2.2
3,461,526	+		IAI47_16325	0.44	-0.6
3,461,526	+		IAI47_16325	0.44	-1.9
3,461,526	+		IAI47_16325	0.44	+0.1
3,461,526	+		IAI47_16325	0.44	-0.6
3,461,526	+		IAI47_16325	0.44	-1.0
3,461,526	+		IAI47_16325	0.44	-0.6
3,461,527	-		IAI47_16325	0.44	-1.5
3,461,527	-		IAI47_16325	0.44	-1.2
3,461,527	-		IAI47_16325	0.44	+0.1
3,461,527	-		IAI47_16325	0.44	-0.3
3,461,527	-		IAI47_16325	0.44	-0.4
3,461,527	-		IAI47_16325	0.44	-0.9
3,461,527	-		IAI47_16325	0.44	+0.1
3,461,527	-		IAI47_16325	0.44	-1.1
3,461,527	-		IAI47_16325	0.44	+0.2
3,461,527	-		IAI47_16325	0.44	-0.3
3,461,594	+		IAI47_16325	0.48	-0.5
3,461,594	+		IAI47_16325	0.48	-0.3
3,461,594	+		IAI47_16325	0.48	-0.7
3,461,594	+		IAI47_16325	0.48	-1.9
3,461,594	+		IAI47_16325	0.48	-0.1
3,461,652	-		IAI47_16325	0.51	-3.0
3,461,700	+		IAI47_16325	0.54	-0.7
3,461,701	-		IAI47_16325	0.54	-1.8
3,461,701	-		IAI47_16325	0.54	-0.5
3,461,701	-		IAI47_16325	0.54	-1.1
3,461,732	+		IAI47_16325	0.56	+1.1
3,461,732	+		IAI47_16325	0.56	-0.9
3,461,733	-		IAI47_16325	0.56	+0.6
3,461,733	-		IAI47_16325	0.56	-0.4
3,461,786	+		IAI47_16325	0.59	-0.0
3,461,787	-		IAI47_16325	0.59	-1.7
3,461,787	-		IAI47_16325	0.59	+1.3
3,461,787	-		IAI47_16325	0.59	-1.4
3,461,793	+		IAI47_16325	0.60	-0.8
3,461,793	+		IAI47_16325	0.60	+0.2
3,461,794	-		IAI47_16325	0.60	+0.1
3,461,858	+		IAI47_16325	0.64	-0.1
3,461,859	-		IAI47_16325	0.64	-0.9
3,461,867	+		IAI47_16325	0.64	-0.8
3,461,879	+		IAI47_16325	0.65	+1.9
3,461,993	+		IAI47_16325	0.72	-0.9
3,461,994	-		IAI47_16325	0.72	-0.0
3,461,994	-		IAI47_16325	0.72	-1.3
3,461,994	-		IAI47_16325	0.72	+0.1
3,461,994	-		IAI47_16325	0.72	+0.2
3,462,045	-		IAI47_16325	0.75	-0.6
3,462,075	+		IAI47_16325	0.77	-1.3
3,462,075	+		IAI47_16325	0.77	-2.5
3,462,075	+		IAI47_16325	0.77	-1.9
3,462,075	+		IAI47_16325	0.77	+1.3
3,462,075	+		IAI47_16325	0.77	-1.3
3,462,076	-		IAI47_16325	0.77	+3.1
3,462,076	-		IAI47_16325	0.77	+1.3
3,462,076	-		IAI47_16325	0.77	-0.4
3,462,076	-		IAI47_16325	0.77	+3.2
3,462,090	-		IAI47_16325	0.78	-0.1
3,462,095	+		IAI47_16325	0.78	-0.6
3,462,095	+		IAI47_16325	0.78	-1.5
3,462,095	+		IAI47_16325	0.78	+0.3
3,462,096	-		IAI47_16325	0.78	-0.8
3,462,096	-		IAI47_16325	0.78	-0.3
3,462,096	-		IAI47_16325	0.78	+0.9
3,462,315	-				-0.1
3,462,336	+				+0.3
3,462,350	+				-1.6
3,462,351	-				-0.2
3,462,351	-				+1.0
3,462,351	-				+0.1
3,462,351	-				-0.1
3,462,351	-				-1.1
3,462,353	+				-1.0
3,462,353	+				+1.4
3,462,354	-				-1.0
3,462,354	-				+0.7
3,462,371	+				-1.4
3,462,372	-				+0.3
3,462,385	-				-1.7
3,462,393	+				+0.5
3,462,393	+				-0.3
3,462,393	+				+0.1
3,462,393	+				-0.1
3,462,394	-				-0.9
3,462,394	-				-0.6
3,462,394	-				+0.2
3,462,404	+				+4.2
3,462,404	+				-1.3
3,462,404	+				+1.1
3,462,404	+				-0.4
3,462,404	+				+0.1
3,462,405	-				-0.6
3,462,444	+				+3.1
3,462,445	-				-0.7
3,462,445	-				+0.5
3,462,445	-				-1.5
3,462,452	+				-0.5
3,462,452	+				-0.2
3,462,452	+				+1.5
3,462,452	+				+0.1
3,462,452	+				-0.9
3,462,452	+				+0.4
3,462,453	-				+0.1
3,462,453	-				+0.4
3,462,453	-				+0.4
3,462,462	+				-1.4
3,462,462	+				+0.2
3,462,462	+				-1.4
3,462,463	-				-0.4
3,462,463	-				+2.4
3,462,463	-				+3.7
3,462,463	-				-0.2
3,462,471	-				+1.4
3,462,517	+				+0.4
3,462,517	+				-0.2
3,462,518	-				-0.1
3,462,557	+				+1.6
3,462,557	+				-1.4
3,462,557	+				-1.4
3,462,557	+				-0.4
3,462,599	-				-1.6
3,462,701	+		IAI47_16330	0.21	+0.7
3,462,736	+		IAI47_16330	0.25	-0.2
3,462,736	+		IAI47_16330	0.25	+0.5
3,462,741	+		IAI47_16330	0.26	-1.0
3,462,741	+		IAI47_16330	0.26	-1.1
3,462,741	+		IAI47_16330	0.26	+3.2
3,462,742	-		IAI47_16330	0.26	+0.8
3,462,742	-		IAI47_16330	0.26	-0.3
3,462,742	-		IAI47_16330	0.26	-2.5
3,462,742	-		IAI47_16330	0.26	-1.2
3,462,781	+		IAI47_16330	0.30	+0.5
3,462,781	+				+2.1
3,462,781	+		IAI47_16330	0.30	-0.2
3,462,781	+		IAI47_16330	0.30	+0.2
3,462,782	-		IAI47_16330	0.30	+0.0
3,462,782	-		IAI47_16330	0.30	-0.6
3,462,804	+		IAI47_16330	0.33	-0.2
3,462,834	-		IAI47_16330	0.36	-0.4
3,462,884	+		IAI47_16330	0.42	+1.2
3,462,884	+		IAI47_16330	0.42	-0.4
3,462,884	+		IAI47_16330	0.42	-0.1
3,462,884	+		IAI47_16330	0.42	+0.3
3,462,885	-		IAI47_16330	0.42	+1.3
3,462,885	-		IAI47_16330	0.42	+1.0
3,462,885	-		IAI47_16330	0.42	-0.6
3,462,889	+		IAI47_16330	0.42	+0.1
3,462,889	+		IAI47_16330	0.42	+0.1
3,462,890	-		IAI47_16330	0.42	+0.1
3,462,890	-		IAI47_16330	0.42	-0.6
3,462,890	-		IAI47_16330	0.42	+0.0
3,462,890	-		IAI47_16330	0.42	+1.6
3,462,890	-		IAI47_16330	0.42	-1.4
3,462,996	+		IAI47_16330	0.54	+0.4
3,462,997	-		IAI47_16330	0.54	-1.7
3,462,997	-		IAI47_16330	0.54	-1.3
3,462,998	-		IAI47_16330	0.54	-0.8
3,463,049	-		IAI47_16330	0.60	-0.1
3,463,070	+		IAI47_16330	0.62	-0.3
3,463,070	+		IAI47_16330	0.62	+1.2
3,463,070	+		IAI47_16330	0.62	-0.4
3,463,071	-		IAI47_16330	0.63	+1.4
3,463,071	-		IAI47_16330	0.63	-0.2
3,463,207	+		IAI47_16330	0.78	+0.5
3,463,208	-		IAI47_16330	0.78	+1.1
3,463,208	-		IAI47_16330	0.78	-0.1
3,463,251	-		IAI47_16330	0.83	+1.3
3,463,292	+		IAI47_16330	0.87	+0.6
3,463,292	+		IAI47_16330	0.87	+0.5
3,463,293	-		IAI47_16330	0.87	+1.2
3,463,313	+		IAI47_16330	0.90	+1.5
3,463,314	-		IAI47_16330	0.90	+1.7
3,463,314	-		IAI47_16330	0.90	-0.0
3,463,314	-		IAI47_16330	0.90	+0.2
3,463,343	+				+0.0
3,463,449	-				-0.0
3,463,449	-				-0.4
3,463,470	+				-2.4
3,463,470	+				+0.2
3,463,476	+				-0.3
3,463,476	+				-1.1
3,463,476	+				+0.2
3,463,476	+				-0.4
3,463,477	-				-1.2
3,463,477	-				-0.3
3,463,477	-				-0.6
3,463,477	-				+0.3
3,463,477	-				-1.0
3,463,477	-				-1.5
3,463,477	-				+0.0
3,463,477	-				+0.4
3,463,477	-				+2.9
3,463,495	+				-0.5
3,463,495	+				+0.4
3,463,495	+				+0.7
3,463,496	-				+3.0
3,463,496	-				-1.5
3,463,512	+				-0.1
3,463,513	-				-0.6
3,463,519	+				+1.5
3,463,519	+				-1.3
3,463,519	+				-0.9
3,463,519	+				-0.2
3,463,519	+				+0.5
3,463,519	+				-1.4
3,463,519	+				-0.3
3,463,519	+				+1.2
3,463,519	+				+0.7
3,463,519	+				+1.0
3,463,519	+				-0.3
3,463,519	+				-1.6
3,463,519	+				+1.3
3,463,519	+				+1.1
3,463,520	-				+0.8
3,463,520	-				-1.0
3,463,520	-				+2.4
3,463,520	-				+0.6
3,463,520	-				-0.9
3,463,520	-				+0.8
3,463,520	-				-1.5
3,463,520	-				+1.2
3,463,520	-				+1.7
3,463,520	-				-0.6
3,463,520	-				-0.6
3,463,520	-				-0.2
3,463,520	-				-0.3
3,463,523	+				-0.4
3,463,523	+				+2.0
3,463,523	+				-0.3
3,463,523	+				-2.6
3,463,523	+				-0.2
3,463,523	+				-0.4
3,463,523	+				+0.1
3,463,523	+				+0.5
3,463,523	+				+0.3
3,463,524	-				-0.5
3,463,524	-				+0.6
3,463,524	-				-0.0
3,463,524	-				-2.3
3,463,573	+				+1.6
3,463,573	+				+0.1
3,463,573	+				-0.8
3,463,574	-				+0.8
3,463,577	+				-0.4
3,463,577	+				-0.4
3,463,577	+				+1.4
3,463,577	+				-0.7
3,463,578	-				-0.3
3,463,578	-				-0.6
3,463,592	+				+0.9
3,463,592	+				+0.1
3,463,592	+				+1.6
3,463,593	-				+0.3
3,463,593	-				-2.1
3,463,593	-				-1.1
3,463,593	-				-1.2
3,463,593	-				+2.7
3,463,593	-				+0.5
3,463,593	-				-2.3
3,463,593	-				+0.7
3,463,598	+				-0.6
3,463,598	+				-0.2
3,463,598	+				-0.0
3,463,599	-				+2.4
3,463,617	-				+0.6
3,463,640	+				-0.0
3,463,677	+				-0.7
3,463,677	+				-1.1
3,463,677	+				-1.4
3,463,677	+				+0.8
3,463,677	+				-0.0
3,463,678	-				+2.1
3,463,678	-				-0.5
3,463,678	-				+0.0
3,463,724	+		IAI47_16335	0.13	-1.0
3,463,725	-		IAI47_16335	0.13	-0.1
3,463,772	+		IAI47_16335	0.18	+0.1
3,463,772	+		IAI47_16335	0.18	-1.3
3,463,772	+		IAI47_16335	0.18	-1.6
3,463,773	-		IAI47_16335	0.18	-0.2
3,463,773	-		IAI47_16335	0.18	+1.1
3,463,773	-		IAI47_16335	0.18	+0.4
3,463,773	-		IAI47_16335	0.18	+0.8
3,463,832	+		IAI47_16335	0.24	-1.7
3,463,832	+		IAI47_16335	0.24	-1.4
3,463,832	+		IAI47_16335	0.24	+3.0
3,463,833	-		IAI47_16335	0.24	-0.8
3,463,833	-		IAI47_16335	0.24	-0.3
3,463,854	+		IAI47_16335	0.26	+1.9
3,463,925	+		IAI47_16335	0.33	+0.2
3,463,926	-		IAI47_16335	0.33	-1.0
3,463,926	-		IAI47_16335	0.33	+0.6
3,464,187	+		IAI47_16335	0.59	+1.0
3,464,187	+		IAI47_16335	0.59	+3.1
3,464,187	+		IAI47_16335	0.59	+0.7
3,464,195	+		IAI47_16335	0.60	-1.5
3,464,195	+		IAI47_16335	0.60	-1.5
3,464,195	+		IAI47_16335	0.60	-0.7
3,464,195	+		IAI47_16335	0.60	-1.0
3,464,196	-		IAI47_16335	0.60	-0.2
3,464,196	-		IAI47_16335	0.60	-2.0
3,464,196	-		IAI47_16335	0.60	+0.8
3,464,196	-		IAI47_16335	0.60	+0.2
3,464,196	-		IAI47_16335	0.60	-1.1
3,464,225	+		IAI47_16335	0.63	+1.2
3,464,225	+		IAI47_16335	0.63	-0.9
3,464,225	+		IAI47_16335	0.63	-0.9
3,464,225	+		IAI47_16335	0.63	+1.2
3,464,225	+		IAI47_16335	0.63	-0.1
3,464,226	-		IAI47_16335	0.63	+1.9
3,464,239	-		IAI47_16335	0.64	+0.1
3,464,239	-		IAI47_16335	0.64	+0.3
3,464,240	+		IAI47_16335	0.65	-1.3
3,464,240	+		IAI47_16335	0.65	+0.2
3,464,240	+		IAI47_16335	0.65	-0.4
3,464,240	+		IAI47_16335	0.65	+0.8
3,464,240	+		IAI47_16335	0.65	-0.8
3,464,241	-		IAI47_16335	0.65	+0.5
3,464,309	+		IAI47_16335	0.71	-0.8
3,464,309	+		IAI47_16335	0.71	-1.6
3,464,309	+		IAI47_16335	0.71	-0.4
3,464,309	+		IAI47_16335	0.71	+2.5
3,464,309	+		IAI47_16335	0.71	+0.7
3,464,309	+		IAI47_16335	0.71	-0.6
3,464,309	+		IAI47_16335	0.71	-0.3
3,464,310	-		IAI47_16335	0.72	+1.4
3,464,310	-		IAI47_16335	0.72	+0.4
3,464,310	-		IAI47_16335	0.72	-1.4
3,464,310	-		IAI47_16335	0.72	-1.8
3,464,310	-		IAI47_16335	0.72	-0.2
3,464,310	-		IAI47_16335	0.72	-0.5
3,464,394	+		IAI47_16335	0.80	-0.8
3,464,394	+		IAI47_16335	0.80	-0.1
3,464,394	+		IAI47_16335	0.80	-0.2