Experiment: copper (II) chloride 2 uM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_03105 and IAI47_03110 are separated by 43 nucleotides IAI47_03110 and IAI47_03115 are separated by 438 nucleotides
IAI47_03105: IAI47_03105 - bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE, at 643,415 to 644,839
_03105
IAI47_03110: IAI47_03110 - accessory factor UbiK family protein, at 644,883 to 645,269
_03110
IAI47_03115: IAI47_03115 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 645,708 to 646,364
_03115
Position (kb) 644
645
646 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 644.850 kb on + strand at 644.850 kb on + strand at 644.850 kb on + strand at 644.851 kb on - strand at 644.882 kb on - strand at 644.882 kb on - strand at 644.882 kb on - strand at 644.882 kb on - strand at 644.882 kb on - strand at 644.882 kb on - strand at 644.882 kb on - strand at 644.884 kb on + strand at 644.884 kb on + strand at 644.884 kb on + strand at 644.884 kb on + strand at 644.884 kb on + strand at 644.885 kb on - strand at 644.885 kb on - strand at 644.885 kb on - strand at 644.885 kb on - strand at 644.885 kb on - strand at 644.885 kb on - strand at 644.885 kb on - strand at 644.891 kb on + strand at 644.891 kb on + strand at 644.891 kb on + strand at 644.891 kb on + strand at 644.892 kb on - strand at 644.892 kb on - strand at 644.892 kb on - strand at 645.285 kb on - strand at 645.307 kb on + strand at 645.308 kb on - strand at 645.308 kb on - strand at 645.308 kb on - strand at 645.315 kb on + strand at 645.315 kb on + strand at 645.315 kb on + strand at 645.315 kb on + strand at 645.315 kb on + strand at 645.315 kb on + strand at 645.316 kb on - strand at 645.316 kb on - strand at 645.316 kb on - strand at 645.316 kb on - strand at 645.316 kb on - strand at 645.318 kb on + strand at 645.318 kb on + strand at 645.318 kb on + strand at 645.318 kb on + strand at 645.318 kb on + strand at 645.319 kb on - strand at 645.319 kb on - strand at 645.319 kb on - strand at 645.319 kb on - strand at 645.325 kb on + strand at 645.325 kb on + strand at 645.325 kb on + strand at 645.325 kb on + strand at 645.326 kb on - strand at 645.326 kb on - strand at 645.326 kb on - strand at 645.326 kb on - strand at 645.331 kb on + strand at 645.331 kb on + strand at 645.331 kb on + strand at 645.331 kb on + strand at 645.331 kb on + strand at 645.331 kb on + strand at 645.331 kb on + strand at 645.332 kb on - strand at 645.332 kb on - strand at 645.332 kb on - strand at 645.332 kb on - strand at 645.353 kb on - strand at 645.396 kb on + strand at 645.428 kb on + strand at 645.430 kb on + strand at 645.430 kb on + strand at 645.430 kb on + strand at 645.430 kb on + strand at 645.430 kb on + strand at 645.658 kb on + strand at 645.658 kb on + strand at 645.658 kb on + strand at 645.658 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2 uM, anaerobic remove 644,850 + -1.7 644,850 + -2.5 644,850 + +0.4 644,851 - -0.5 644,882 - -1.3 644,882 - +0.3 644,882 - +0.6 644,882 - -0.3 644,882 - +0.8 644,882 - -1.5 644,882 - +1.1 644,884 + +0.7 644,884 + +1.2 644,884 + -0.1 644,884 + -0.7 644,884 + -1.8 644,885 - +0.8 644,885 - -2.2 644,885 - -0.8 644,885 - -0.8 644,885 - -0.3 644,885 - +2.3 644,885 - +2.4 644,891 + +0.1 644,891 + -0.3 644,891 + +4.8 644,891 + +0.2 644,892 - +1.8 644,892 - +0.2 644,892 - +0.7 645,285 - -0.2 645,307 + -0.5 645,308 - +1.4 645,308 - -0.1 645,308 - +0.5 645,315 + -0.8 645,315 + +0.2 645,315 + +1.3 645,315 + +1.0 645,315 + +0.9 645,315 + +0.0 645,316 - -0.6 645,316 - -0.8 645,316 - -1.0 645,316 - +0.1 645,316 - -0.7 645,318 + +2.4 645,318 + +5.6 645,318 + +0.2 645,318 + -0.3 645,318 + +0.2 645,319 - -0.7 645,319 - +0.4 645,319 - +1.6 645,319 - +0.1 645,325 + -0.1 645,325 + -0.3 645,325 + -0.1 645,325 + -0.1 645,326 - -1.1 645,326 - +0.1 645,326 - -1.4 645,326 - +0.8 645,331 + +1.7 645,331 + -0.7 645,331 + +5.2 645,331 + +0.9 645,331 + -0.9 645,331 + +2.6 645,331 + -0.9 645,332 - +0.4 645,332 - -0.4 645,332 - -0.1 645,332 - -1.8 645,353 - -1.0 645,396 + +0.1 645,428 + +0.0 645,430 + +0.9 645,430 + +2.0 645,430 + -1.5 645,430 + -1.3 645,430 + +1.1 645,658 + +0.1 645,658 + -0.4 645,658 + +0.1 645,658 + -2.6
Or see this region's nucleotide sequence