Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03218

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
3,377,671	-		CCNA_03216	0.47	-0.0
3,377,734	+		CCNA_03216	0.78	+0.3
3,377,737	-		CCNA_03216	0.80	+1.0
3,377,738	+		CCNA_03216	0.80	+1.5
3,377,738	+		CCNA_03216	0.80	+0.2
3,377,744	+		CCNA_03216	0.83	-1.8
3,377,746	-		CCNA_03216	0.84	+1.4
3,377,767	+				+0.2
3,377,774	-				+0.4
3,377,780	-				+1.4
3,377,831	-				-0.8
3,377,831	-				+0.0
3,377,831	-				-0.4
3,377,831	-				+0.4
3,377,913	-				-1.1
3,377,951	+				+3.1
3,377,951	+				-0.2
3,377,954	-				-1.6
3,377,968	+				+0.5
3,377,968	+				-0.3
3,377,976	-				-0.3
3,377,995	-				+0.8
3,378,029	-		CCNA_03217	0.12	+1.1
3,378,050	+		CCNA_03217	0.15	+0.2
3,378,089	+		CCNA_03217	0.21	-2.2
3,378,234	+		CCNA_03217	0.44	-3.0
3,378,254	+		CCNA_03217	0.47	-1.9
3,378,287	+		CCNA_03217	0.52	-0.8
3,378,287	+		CCNA_03217	0.52	+3.1
3,378,287	+		CCNA_03217	0.52	+0.3
3,378,287	+		CCNA_03217	0.52	+1.8
3,378,287	+		CCNA_03217	0.52	+1.7
3,378,287	+		CCNA_03217	0.52	-0.4
3,378,287	+		CCNA_03217	0.52	+2.1
3,378,287	+		CCNA_03217	0.52	-0.7
3,378,288	-		CCNA_03217	0.53	+1.8
3,378,288	-		CCNA_03217	0.53	+0.2
3,378,288	-		CCNA_03217	0.53	+0.0
3,378,295	-		CCNA_03217	0.54	+0.1
3,378,295	-		CCNA_03217	0.54	-0.4
3,378,295	-		CCNA_03217	0.54	+0.6
3,378,295	-		CCNA_03217	0.54	+0.6
3,378,295	-		CCNA_03217	0.54	+0.4
3,378,295	-		CCNA_03217	0.54	+1.2
3,378,295	-		CCNA_03217	0.54	+0.1
3,378,314	-		CCNA_03217	0.57	+1.0
3,378,343	+		CCNA_03217	0.61	-1.4
3,378,384	-		CCNA_03217	0.68	+1.6
3,378,406	+				+0.2
3,378,465	+		CCNA_03217	0.81	+0.4
3,378,499	-		CCNA_03217	0.86	+1.0
3,378,499	-		CCNA_03217	0.86	-0.4
3,378,501	+		CCNA_03217	0.86	-0.8
3,378,501	+		CCNA_03217	0.86	-0.0
3,378,501	+		CCNA_03217	0.86	+0.2
3,378,501	+		CCNA_03217	0.86	+1.2
3,378,501	+		CCNA_03217	0.86	-0.4
3,378,501	+		CCNA_03217	0.86	-1.5
3,378,501	+		CCNA_03217	0.86	-3.1
3,378,509	-		CCNA_03217	0.88	+0.8
3,378,509	-		CCNA_03217	0.88	+0.4
3,378,509	-		CCNA_03217	0.88	+0.7
3,378,509	-		CCNA_03217	0.88	+1.0
3,378,546	-				+1.7
3,378,555	-				+0.8
3,378,578	-				-0.6
3,378,578	-				-1.3
3,378,593	-				-0.1
3,378,603	-				+3.1
3,378,712	+				-0.7
3,378,757	-				+1.1
3,378,782	+		CCNA_03218	0.11	-0.8
3,378,789	-		CCNA_03218	0.12	-0.4
3,378,871	-		CCNA_03218	0.19	+0.6
3,378,906	-		CCNA_03218	0.22	-0.3
3,378,912	-		CCNA_03218	0.23	-2.6
3,378,931	-		CCNA_03218	0.25	-0.9
3,378,932	+		CCNA_03218	0.25	-0.7
3,378,999	-		CCNA_03218	0.31	+0.8
3,378,999	-		CCNA_03218	0.31	-0.6
3,379,029	+		CCNA_03218	0.34	-0.5
3,379,034	+		CCNA_03218	0.34	+0.7
3,379,042	-		CCNA_03218	0.35	+1.3
3,379,108	-		CCNA_03218	0.41	+0.3
3,379,109	+		CCNA_03218	0.41	+1.7
3,379,117	-		CCNA_03218	0.42	-1.1
3,379,135	+		CCNA_03218	0.44	-1.5
3,379,148	-		CCNA_03218	0.45	-0.3
3,379,167	-		CCNA_03218	0.47	+0.9
3,379,170	-		CCNA_03218	0.47	-1.2
3,379,209	+		CCNA_03218	0.51	-0.2
3,379,209	+		CCNA_03218	0.51	-0.1
3,379,214	+		CCNA_03218	0.51	-1.8
3,379,214	+		CCNA_03218	0.51	-1.2
3,379,214	+		CCNA_03218	0.51	-1.7
3,379,214	+		CCNA_03218	0.51	+1.5
3,379,214	+		CCNA_03218	0.51	-0.3
3,379,214	+		CCNA_03218	0.51	-0.4
3,379,231	+		CCNA_03218	0.53	-0.5
3,379,241	-		CCNA_03218	0.53	+0.9
3,379,243	+		CCNA_03218	0.54	-1.2
3,379,246	-		CCNA_03218	0.54	+0.1
3,379,275	-		CCNA_03218	0.57	-1.8
3,379,289	+		CCNA_03218	0.58	-1.6
3,379,318	+		CCNA_03218	0.61	-0.6
3,379,327	-		CCNA_03218	0.61	-0.9
3,379,393	+		CCNA_03218	0.68	-0.2
3,379,411	-		CCNA_03218	0.69	-1.0
3,379,413	+		CCNA_03218	0.69	+0.6
3,379,432	+		CCNA_03218	0.71	-0.5
3,379,447	-		CCNA_03218	0.73	-2.7
3,379,449	+		CCNA_03218	0.73	+0.8
3,379,459	+		CCNA_03218	0.74	-1.4
3,379,495	-		CCNA_03218	0.77	+0.2
3,379,505	+		CCNA_03218	0.78	+0.7
3,379,513	-		CCNA_03218	0.79	+2.7
3,379,516	+		CCNA_03218	0.79	-0.5
3,379,532	+		CCNA_03218	0.81	-0.2
3,379,532	+		CCNA_03218	0.81	-1.6
3,379,542	+		CCNA_03218	0.81	-0.5
3,379,548	-		CCNA_03218	0.82	+0.8
3,379,548	-		CCNA_03218	0.82	-1.8
3,379,586	+		CCNA_03218	0.86	-0.1
3,379,591	+		CCNA_03218	0.86	-0.4
3,379,591	+		CCNA_03218	0.86	-1.3
3,379,591	+		CCNA_03218	0.86	-2.0
3,379,591	+		CCNA_03218	0.86	-2.2
3,379,598	+		CCNA_03218	0.87	+0.7
3,379,598	+		CCNA_03218	0.87	-1.3
3,379,598	+		CCNA_03218	0.87	-2.4
3,379,599	-		CCNA_03218	0.87	+0.4
3,379,599	-		CCNA_03218	0.87	-1.0
3,379,606	-		CCNA_03218	0.87	+0.6
3,379,644	-				+0.9
3,379,644	-				-1.1
3,379,644	-				+0.5
3,379,644	-				-1.0
3,379,648	+				-1.3
3,379,656	+				+0.1
3,379,656	+				-1.2
3,379,656	-				+0.2
3,379,656	-				-0.4
3,379,658	+				-0.1
3,379,671	-				-2.7
3,379,682	+				+2.5
3,379,727	-				-0.8
3,379,735	+				+3.6
3,379,742	+				+0.0
3,379,742	+				-0.7
3,379,743	-				-0.2
3,379,800	+				-0.1
3,379,808	-				-1.0
3,379,808	-				-1.2
3,379,832	+				-1.1
3,379,840	-				-1.8
3,379,888	+				-1.5
3,379,898	+				+0.6
3,379,898	+				-0.2
3,379,898	+				-0.4
3,379,906	-				+0.2
3,379,906	-				-0.2
3,379,924	-				-2.7
3,379,975	-				-2.0
3,380,004	-				-0.6
3,380,009	-				-1.2
3,380,015	+				-1.0
3,380,032	-				-1.6
3,380,061	+		CCNA_03219	0.10	-0.1
3,380,073	-		CCNA_03219	0.11	+0.5
3,380,091	-		CCNA_03219	0.11	+0.6
3,380,114	+		CCNA_03219	0.12	-0.2
3,380,114	+		CCNA_03219	0.12	+0.3
3,380,114	+		CCNA_03219	0.12	-1.8
3,380,114	+		CCNA_03219	0.12	+0.6
3,380,115	-		CCNA_03219	0.12	+0.2
3,380,122	-		CCNA_03219	0.12	-0.1
3,380,122	-		CCNA_03219	0.12	-1.2
3,380,122	-		CCNA_03219	0.12	-1.8
3,380,163	-		CCNA_03219	0.14	-0.5
3,380,174	+		CCNA_03219	0.14	-0.3
3,380,174	+		CCNA_03219	0.14	+0.9
3,380,174	+		CCNA_03219	0.14	-0.1
3,380,174	+		CCNA_03219	0.14	-1.3
3,380,174	+		CCNA_03219	0.14	-0.1
3,380,182	-		CCNA_03219	0.14	+0.8
3,380,192	-		CCNA_03219	0.15	+0.5
3,380,267	+		CCNA_03219	0.17	-0.7
3,380,267	+		CCNA_03219	0.17	-1.6
3,380,275	-		CCNA_03219	0.17	+0.5
3,380,275	-		CCNA_03219	0.17	-1.0
3,380,275	-		CCNA_03219	0.17	-1.3
3,380,275	-		CCNA_03219	0.17	-0.1
3,380,280	-		CCNA_03219	0.17	+3.3
3,380,310	-		CCNA_03219	0.18	+1.1
3,380,311	+		CCNA_03219	0.18	-0.4
3,380,319	-		CCNA_03219	0.19	-0.6
3,380,375	+		CCNA_03219	0.21	-1.9
3,380,402	+		CCNA_03219	0.21	-0.6
3,380,410	-		CCNA_03219	0.22	-2.0
3,380,410	-		CCNA_03219	0.22	-0.5
3,380,410	-		CCNA_03219	0.22	-0.7
3,380,448	+		CCNA_03219	0.23	-3.0
3,380,508	-		CCNA_03219	0.25	+3.5
3,380,511	+		CCNA_03219	0.25	-1.1
3,380,532	+		CCNA_03219	0.26	+0.5
3,380,545	-		CCNA_03219	0.26	-2.2
3,380,574	-		CCNA_03219	0.27	+0.2
3,380,585	+		CCNA_03219	0.27	-2.1
3,380,585	+		CCNA_03219	0.27	-1.8
3,380,593	-		CCNA_03219	0.28	-1.5
3,380,593	-		CCNA_03219	0.28	+0.6
3,380,595	+		CCNA_03219	0.28	-1.2
3,380,631	+		CCNA_03219	0.29	-2.2
3,380,642	-		CCNA_03219	0.29	+0.7
3,380,642	-		CCNA_03219	0.29	+0.6
3,380,642	-		CCNA_03219	0.29	+1.2
3,380,642	-		CCNA_03219	0.29	+1.3
3,380,642	-		CCNA_03219	0.29	+1.1
3,380,670	-		CCNA_03219	0.30	-0.9
3,380,686	+		CCNA_03219	0.31	-1.0
3,380,703	+		CCNA_03219	0.31	-1.6
3,380,707	+		CCNA_03219	0.31	-2.0