Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02408

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
2,549,772	-		CCNA_02406	0.80	+1.0
2,549,779	+		CCNA_02406	0.81	+1.6
2,549,813	-		CCNA_02406	0.87	+0.0
2,549,828	-		CCNA_02406	0.89	+1.4
2,549,828	-		CCNA_02406	0.89	-0.0
2,549,838	+				+0.8
2,549,848	+				+1.0
2,549,855	+				+2.4
2,549,863	-				-0.9
2,549,901	-				-0.5
2,549,913	-				-0.6
2,549,926	+				+2.1
2,549,934	-				-0.0
2,549,950	+				+0.6
2,549,950	+				+0.7
2,549,950	+				+1.4
2,549,950	+				+1.0
2,549,950	+				-0.0
2,549,950	+				+0.1
2,549,950	+				+1.2
2,549,955	+				+0.0
2,549,955	+				-0.7
2,549,955	+				+1.1
2,549,958	-				+1.2
2,549,963	-				+0.9
2,549,963	-				+1.3
2,549,968	-				-0.2
2,549,974	+		CCNA_02407	0.10	+1.6
2,549,974	+		CCNA_02407	0.10	+0.9
2,549,974	+		CCNA_02407	0.10	+0.0
2,549,982	-		CCNA_02407	0.11	+3.8
2,550,097	-		CCNA_02407	0.26	+0.3
2,550,103	+		CCNA_02407	0.27	-0.3
2,550,103	+		CCNA_02407	0.27	+0.1
2,550,103	+				+2.0
2,550,103	+		CCNA_02407	0.27	+1.6
2,550,103	+		CCNA_02407	0.27	+0.9
2,550,111	-		CCNA_02407	0.28	-0.5
2,550,111	-		CCNA_02407	0.28	+1.8
2,550,111	-		CCNA_02407	0.28	+0.1
2,550,111	-		CCNA_02407	0.28	+0.0
2,550,111	-		CCNA_02407	0.28	+0.3
2,550,118	-		CCNA_02407	0.29	+0.4
2,550,145	+		CCNA_02407	0.33	-0.4
2,550,191	+		CCNA_02407	0.39	-3.0
2,550,199	-		CCNA_02407	0.40	-0.1
2,550,199	-		CCNA_02407	0.40	+1.0
2,550,199	-		CCNA_02407	0.40	-0.1
2,550,267	+		CCNA_02407	0.48	-0.6
2,550,269	-		CCNA_02407	0.49	-0.5
2,550,305	-		CCNA_02407	0.53	+0.5
2,550,316	+		CCNA_02407	0.55	-0.6
2,550,319	-		CCNA_02407	0.55	-0.9
2,550,319	-		CCNA_02407	0.55	-0.6
2,550,446	-		CCNA_02407	0.72	-0.9
2,550,448	+		CCNA_02407	0.72	+0.4
2,550,448	+		CCNA_02407	0.72	-1.5
2,550,453	+		CCNA_02407	0.73	-0.0
2,550,456	-		CCNA_02407	0.73	-1.6
2,550,456	-		CCNA_02407	0.73	-1.3
2,550,456	-		CCNA_02407	0.73	-0.4
2,550,461	-		CCNA_02407	0.74	-0.9
2,550,470	-		CCNA_02407	0.75	-0.3
2,550,483	-		CCNA_02407	0.77	+0.0
2,550,495	+		CCNA_02407	0.78	-1.3
2,550,503	-		CCNA_02407	0.79	+0.4
2,550,540	-		CCNA_02407	0.84	+0.1
2,550,669	-				-0.2
2,550,669	-				+0.8
2,550,757	-				+0.8
2,550,852	-		CCNA_02408	0.11	+1.1
2,550,855	-		CCNA_02408	0.11	+1.0
2,550,909	-		CCNA_02408	0.16	+2.5
2,550,912	+		CCNA_02408	0.16	-1.2
2,550,921	+		CCNA_02408	0.17	-3.3
2,550,946	-		CCNA_02408	0.19	+1.1
2,550,970	+		CCNA_02408	0.21	+0.6
2,550,978	+		CCNA_02408	0.22	-0.4
2,551,066	-		CCNA_02408	0.30	+1.6
2,551,084	+		CCNA_02408	0.31	-1.0
2,551,092	-		CCNA_02408	0.32	+2.3
2,551,121	-		CCNA_02408	0.34	-0.3
2,551,128	-		CCNA_02408	0.35	+2.6
2,551,142	-		CCNA_02408	0.36	+1.0
2,551,171	+		CCNA_02408	0.39	-1.4
2,551,215	-		CCNA_02408	0.43	+0.8
2,551,241	+		CCNA_02408	0.45	-1.0
2,551,241	+		CCNA_02408	0.45	-2.0
2,551,246	+		CCNA_02408	0.45	-0.9
2,551,246	+				+1.6
2,551,249	-		CCNA_02408	0.46	-0.1
2,551,249	-		CCNA_02408	0.46	+1.5
2,551,254	-		CCNA_02408	0.46	+1.4
2,551,254	-		CCNA_02408	0.46	+4.2
2,551,266	+		CCNA_02408	0.47	+1.9
2,551,323	+		CCNA_02408	0.52	+0.9
2,551,331	+		CCNA_02408	0.53	-0.9
2,551,386	+		CCNA_02408	0.58	+1.1
2,551,405	+		CCNA_02408	0.59	+1.3
2,551,434	+		CCNA_02408	0.62	-2.3
2,551,442	-		CCNA_02408	0.63	+0.5
2,551,448	+		CCNA_02408	0.63	+0.2
2,551,453	+		CCNA_02408	0.64	+0.7
2,551,466	-		CCNA_02408	0.65	+1.1
2,551,477	+		CCNA_02408	0.66	+1.6
2,551,529	-		CCNA_02408	0.70	+2.0
2,551,540	+		CCNA_02408	0.71	+1.0
2,551,548	-		CCNA_02408	0.72	+3.4
2,551,558	-		CCNA_02408	0.73	+1.9
2,551,582	-		CCNA_02408	0.75	+1.5
2,551,616	-		CCNA_02408	0.78	+1.7
2,551,659	+		CCNA_02408	0.82	-0.8
2,551,734	+		CCNA_02408	0.88	+0.3
2,551,735	+		CCNA_02408	0.89	-1.0
2,551,740	-		CCNA_02408	0.89	+3.6
2,551,743	-		CCNA_02408	0.89	+1.2
2,551,778	-				+2.5
2,551,811	+				+2.4
2,551,838	+				-1.5
2,551,846	-				+1.4
2,551,864	+				-0.8
2,551,867	-				-2.1
2,551,912	+				-1.4
2,551,946	-				-1.6
2,551,967	+				+1.1
2,552,000	+				+1.1
2,552,000	+				+0.1
2,552,000	+				+1.4
2,552,008	-				-0.3
2,552,008	-				-1.7
2,552,032	+				+0.9
2,552,034	+				+2.0
2,552,034	+				+0.6
2,552,058	+				+3.5
2,552,058	+				+1.0
2,552,066	-				-0.7
2,552,066	-				+0.0
2,552,075	+				+1.6
2,552,083	+				+1.8
2,552,083	+				+4.6
2,552,083	+				+1.5
2,552,096	+				+1.0
2,552,109	-				-1.2
2,552,138	-				+0.6
2,552,173	+				+1.7
2,552,211	+		CCNA_02409	0.11	+1.2
2,552,269	+		CCNA_02409	0.14	+0.7
2,552,306	-		CCNA_02409	0.16	-0.7
2,552,313	-		CCNA_02409	0.16	-3.0
2,552,337	-		CCNA_02409	0.18	-1.1
2,552,350	+		CCNA_02409	0.19	+0.5
2,552,375	-		CCNA_02409	0.20	-1.4
2,552,394	+		CCNA_02409	0.21	+1.3
2,552,396	+		CCNA_02409	0.21	+1.1
2,552,396	+		CCNA_02409	0.21	+0.7
2,552,404	-		CCNA_02409	0.22	-0.2
2,552,409	-		CCNA_02409	0.22	-1.6
2,552,453	-		CCNA_02409	0.24	+0.7
2,552,471	-		CCNA_02409	0.25	-2.1
2,552,485	+		CCNA_02409	0.26	+0.9
2,552,523	+		CCNA_02409	0.28	+1.6
2,552,524	-		CCNA_02409	0.28	-1.8
2,552,531	-		CCNA_02409	0.29	-2.2
2,552,558	-		CCNA_02409	0.30	+0.4
2,552,596	+		CCNA_02409	0.32	-1.3
2,552,604	+		CCNA_02409	0.33	+1.2
2,552,604	+		CCNA_02409	0.33	+0.1
2,552,604	+		CCNA_02409	0.33	+0.6
2,552,604	+		CCNA_02409	0.33	+1.4
2,552,604	+		CCNA_02409	0.33	+0.3
2,552,612	-				+3.6
2,552,612	-		CCNA_02409	0.33	-1.8
2,552,612	-		CCNA_02409	0.33	+0.3
2,552,614	+		CCNA_02409	0.33	+1.2
2,552,665	+		CCNA_02409	0.36	+0.7
2,552,687	+		CCNA_02409	0.37	+0.9
2,552,711	+		CCNA_02409	0.39	+0.8
2,552,716	+		CCNA_02409	0.39	+2.4
2,552,719	-				+0.6
2,552,759	-		CCNA_02409	0.41	+0.3
2,552,783	+		CCNA_02409	0.43	+1.2
2,552,785	+		CCNA_02409	0.43	+1.4
2,552,785	+		CCNA_02409	0.43	+1.2
2,552,785	+		CCNA_02409	0.43	-0.2
2,552,785	+		CCNA_02409	0.43	+1.3
2,552,785	+		CCNA_02409	0.43	+0.9
2,552,793	-		CCNA_02409	0.43	-2.3
2,552,807	+		CCNA_02409	0.44	+0.7
2,552,807	+		CCNA_02409	0.44	+1.5
2,552,807	+		CCNA_02409	0.44	+1.0
2,552,815	-		CCNA_02409	0.44	-0.2