Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01475

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
1,581,602	+		CCNA_01473	0.68	-0.0
1,581,618	+		CCNA_01473	0.68	+1.1
1,581,621	+		CCNA_01473	0.69	-0.0
1,581,660	+		CCNA_01473	0.70	-0.6
1,581,660	+		CCNA_01473	0.70	+2.0
1,581,660	+		CCNA_01473	0.70	+3.2
1,581,660	+		CCNA_01473	0.70	-1.4
1,581,660	+		CCNA_01473	0.70	+0.9
1,581,660	+		CCNA_01473	0.70	-1.2
1,581,663	-		CCNA_01473	0.70	-0.5
1,581,700	+		CCNA_01473	0.72	-1.2
1,581,700	+		CCNA_01473	0.72	+0.6
1,581,714	+		CCNA_01473	0.73	-0.4
1,581,757	+		CCNA_01473	0.75	-0.2
1,581,759	+		CCNA_01473	0.75	+0.5
1,581,759	+		CCNA_01473	0.75	-0.2
1,581,825	+		CCNA_01473	0.78	+0.3
1,581,825	+		CCNA_01473	0.78	+0.1
1,581,877	+		CCNA_01473	0.80	-1.8
1,581,905	+		CCNA_01473	0.82	+0.1
1,581,911	-		CCNA_01473	0.82	-1.2
1,581,911	-		CCNA_01473	0.82	-0.2
1,581,913	-		CCNA_01473	0.82	-0.7
1,581,913	-		CCNA_01473	0.82	+0.2
1,581,963	+		CCNA_01473	0.84	-0.2
1,581,963	-		CCNA_01473	0.84	-0.7
1,581,999	+		CCNA_01473	0.86	+0.5
1,581,999	+		CCNA_01473	0.86	-0.5
1,582,002	-		CCNA_01473	0.86	-0.2
1,582,004	+		CCNA_01473	0.86	-0.2
1,582,004	+		CCNA_01473	0.86	+0.5
1,582,004	+		CCNA_01473	0.86	-0.5
1,582,004	+		CCNA_01473	0.86	-1.1
1,582,004	+		CCNA_01473	0.86	-1.7
1,582,012	-		CCNA_01473	0.87	-2.0
1,582,012	-		CCNA_01473	0.87	-2.0
1,582,012	-		CCNA_01473	0.87	-0.0
1,582,012	-		CCNA_01473	0.87	-0.7
1,582,012	-		CCNA_01473	0.87	-2.4
1,582,012	-		CCNA_01473	0.87	+1.4
1,582,026	-		CCNA_01473	0.87	-1.4
1,582,048	-		CCNA_01473	0.88	-0.7
1,582,050	+		CCNA_01473	0.88	+0.5
1,582,050	+		CCNA_01473	0.88	-1.2
1,582,050	+		CCNA_01473	0.88	-0.8
1,582,055	+		CCNA_01473	0.89	-1.5
1,582,058	-		CCNA_01473	0.89	-1.4
1,582,058	-		CCNA_01473	0.89	-1.8
1,582,058	-		CCNA_01473	0.89	-2.5
1,582,106	-				+0.6
1,582,177	-				-1.9
1,582,177	-				-1.5
1,582,199	+				-1.5
1,582,207	-				+1.8
1,582,252	+				-2.1
1,582,257	+				-1.5
1,582,265	-				-2.0
1,582,270	-				-1.6
1,582,311	+				-0.4
1,582,332	+		CCNA_01474	0.18	-0.9
1,582,337	+		CCNA_01474	0.21	-0.9
1,582,351	+		CCNA_01474	0.30	-2.4
1,582,393	-		CCNA_01474	0.55	-1.1
1,582,399	+		CCNA_01474	0.58	-1.9
1,582,425	+		CCNA_01474	0.74	-2.2
1,582,597	-				-1.2
1,582,659	+				-2.1
1,582,659	+				-3.1
1,582,674	-		CCNA_01475	0.12	+0.7
1,582,679	+		CCNA_01475	0.12	-1.1
1,582,687	-		CCNA_01475	0.14	-0.9
1,582,702	-		CCNA_01475	0.16	-1.2
1,582,735	-		CCNA_01475	0.21	-1.5
1,582,746	-				+2.6
1,582,750	-		CCNA_01475	0.23	-2.5
1,582,796	+		CCNA_01475	0.31	+0.6
1,582,804	-		CCNA_01475	0.32	-1.9
1,582,806	+				+0.6
1,582,814	-		CCNA_01475	0.33	-0.4
1,582,823	+		CCNA_01475	0.35	-1.4
1,582,827	-		CCNA_01475	0.35	+1.4
1,582,856	+		CCNA_01475	0.40	-0.6
1,582,864	+		CCNA_01475	0.41	-0.9
1,582,872	-		CCNA_01475	0.42	+2.0
1,582,874	-		CCNA_01475	0.43	-1.2
1,582,892	+		CCNA_01475	0.45	-1.1
1,582,918	-		CCNA_01475	0.49	-1.2
1,582,919	+		CCNA_01475	0.50	-0.9
1,582,947	+		CCNA_01475	0.54	-2.3
1,582,976	+		CCNA_01475	0.58	+0.4
1,582,981	+		CCNA_01475	0.59	-2.0
1,582,989	-		CCNA_01475	0.60	-0.4
1,582,998	+		CCNA_01475	0.62	-1.2
1,582,998	+		CCNA_01475	0.62	+0.0
1,583,005	+		CCNA_01475	0.63	+0.5
1,583,006	-		CCNA_01475	0.63	+0.6
1,583,006	-		CCNA_01475	0.63	+0.4
1,583,015	+		CCNA_01475	0.64	-0.2
1,583,023	-		CCNA_01475	0.66	-2.0
1,583,023	-		CCNA_01475	0.66	-1.6
1,583,047	+		CCNA_01475	0.69	-1.0
1,583,053	+		CCNA_01475	0.70	-0.0
1,583,070	+		CCNA_01475	0.73	-1.8
1,583,077	-		CCNA_01475	0.74	-1.7
1,583,079	+		CCNA_01475	0.74	-0.2
1,583,132	+		CCNA_01475	0.83	-0.2
1,583,165	+		CCNA_01475	0.88	-0.4
1,583,194	-				-2.1
1,583,205	-				-2.0
1,583,205	-				-2.6
1,583,238	+				+0.1
1,583,310	-				-0.9
1,583,323	+				-1.2
1,583,324	+				-1.8
1,583,324	+				-0.1
1,583,348	-				-0.8
1,583,369	-				-0.3
1,583,377	+				-2.8
1,583,385	-				-0.9
1,583,385	-				-0.4
1,583,413	-				+1.3
1,583,415	+				-0.4
1,583,437	-				-1.1
1,583,438	+				-2.8
1,583,438	+				-0.1
1,583,487	+				-1.2
1,583,543	+		CCNA_01476	0.15	-0.6
1,583,543	+		CCNA_01476	0.15	-1.6
1,583,551	-		CCNA_01476	0.16	+0.5
1,583,551	-		CCNA_01476	0.16	+1.2
1,583,557	+		CCNA_01476	0.17	+1.3
1,583,558	+		CCNA_01476	0.17	-1.6
1,583,565	-		CCNA_01476	0.18	-0.6
1,583,600	-		CCNA_01476	0.23	-1.8
1,583,650	-		CCNA_01476	0.29	-0.8
1,583,688	-		CCNA_01476	0.34	-2.6
1,583,697	-		CCNA_01476	0.35	-0.7
1,583,697	-		CCNA_01476	0.35	+0.3
1,583,697	-		CCNA_01476	0.35	-0.7
1,583,699	+		CCNA_01476	0.36	+0.7
1,583,699	+		CCNA_01476	0.36	+0.1
1,583,699	+		CCNA_01476	0.36	+0.8
1,583,707	-		CCNA_01476	0.37	+0.0
1,583,707	-		CCNA_01476	0.37	-2.1
1,583,743	-		CCNA_01476	0.41	+1.0
1,583,749	+		CCNA_01476	0.42	+0.5
1,583,751	-		CCNA_01476	0.42	-1.2
1,583,791	+		CCNA_01476	0.48	-2.9
1,583,791	+		CCNA_01476	0.48	-2.8
1,583,799	-		CCNA_01476	0.49	-0.8
1,583,865	+		CCNA_01476	0.57	-1.4
1,583,866	-		CCNA_01476	0.57	-1.7
1,583,873	-		CCNA_01476	0.58	-3.6
1,583,881	-		CCNA_01476	0.59	+0.6
1,583,883	-		CCNA_01476	0.60	-2.9
1,583,902	-		CCNA_01476	0.62	-1.3
1,583,918	-		CCNA_01476	0.64	-0.1
1,583,920	-		CCNA_01476	0.64	+0.0
1,583,930	+		CCNA_01476	0.66	-1.3
1,583,930	+		CCNA_01476	0.66	-1.5
1,583,937	+				+1.6
1,583,969	-		CCNA_01476	0.71	+0.1
1,583,969	-		CCNA_01476	0.71	-0.7
1,583,976	+		CCNA_01476	0.72	-0.9
1,583,984	-		CCNA_01476	0.73	-1.7
1,583,984	-		CCNA_01476	0.73	-1.5
1,583,989	+		CCNA_01476	0.73	-1.5
1,584,017	+		CCNA_01476	0.77	+0.8
1,584,069	+		CCNA_01476	0.84	-1.0
1,584,070	+		CCNA_01476	0.84	-0.6
1,584,078	-		CCNA_01476	0.85	-1.2
1,584,078	-		CCNA_01476	0.85	-1.3
1,584,141	+				-1.8
1,584,149	-				+0.6
1,584,194	-				-0.5
1,584,206	+				-0.4
1,584,218	+				+0.7
1,584,223	+				+0.4
1,584,226	-				-0.2
1,584,226	-				-0.5
1,584,231	-				-0.4