Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_605 and Ac3H11_606 overlap by 4 nucleotides Ac3H11_606 and Ac3H11_607 are separated by 25 nucleotides
Ac3H11_605 - Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1), at 41,466 to 42,503
_605
Ac3H11_606 - Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1), at 42,500 to 43,513
_606
Ac3H11_607 - Predicted L-arabinose ABC transport system, ATP-binding protein, at 43,539 to 45,092
_607
Position (kb) 42
43
44 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 41.635 kb on + strand, within Ac3H11_605 at 41.635 kb on + strand, within Ac3H11_605 at 41.636 kb on - strand, within Ac3H11_605 at 41.691 kb on + strand, within Ac3H11_605 at 41.734 kb on + strand, within Ac3H11_605 at 41.785 kb on + strand, within Ac3H11_605 at 41.940 kb on + strand, within Ac3H11_605 at 41.990 kb on - strand, within Ac3H11_605 at 42.349 kb on + strand, within Ac3H11_605 at 42.349 kb on + strand, within Ac3H11_605 at 42.350 kb on - strand, within Ac3H11_605 at 42.412 kb on + strand at 42.412 kb on + strand at 42.639 kb on + strand, within Ac3H11_606 at 42.640 kb on - strand, within Ac3H11_606 at 42.648 kb on + strand, within Ac3H11_606 at 42.648 kb on + strand, within Ac3H11_606 at 42.849 kb on + strand, within Ac3H11_606 at 42.849 kb on + strand, within Ac3H11_606 at 42.850 kb on - strand, within Ac3H11_606 at 43.038 kb on + strand, within Ac3H11_606 at 43.048 kb on - strand, within Ac3H11_606 at 43.048 kb on - strand, within Ac3H11_606 at 43.050 kb on + strand, within Ac3H11_606 at 43.050 kb on + strand, within Ac3H11_606 at 43.050 kb on + strand, within Ac3H11_606 at 43.051 kb on - strand, within Ac3H11_606 at 43.051 kb on - strand, within Ac3H11_606 at 43.051 kb on - strand, within Ac3H11_606 at 43.051 kb on - strand, within Ac3H11_606 at 43.178 kb on + strand, within Ac3H11_606 at 43.568 kb on - strand at 43.632 kb on + strand at 43.633 kb on - strand at 43.633 kb on - strand at 43.779 kb on + strand, within Ac3H11_607 at 43.894 kb on + strand, within Ac3H11_607 at 43.895 kb on - strand, within Ac3H11_607 at 44.428 kb on + strand, within Ac3H11_607 at 44.429 kb on - strand, within Ac3H11_607 at 44.429 kb on - strand, within Ac3H11_607
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 41,635 + Ac3H11_605 0.16 -4.8 41,635 + Ac3H11_605 0.16 -3.2 41,636 - Ac3H11_605 0.16 -3.1 41,691 + Ac3H11_605 0.22 -4.5 41,734 + Ac3H11_605 0.26 -2.5 41,785 + Ac3H11_605 0.31 -4.6 41,940 + Ac3H11_605 0.46 -3.7 41,990 - Ac3H11_605 0.50 -4.4 42,349 + Ac3H11_605 0.85 -3.2 42,349 + Ac3H11_605 0.85 -2.8 42,350 - Ac3H11_605 0.85 -1.1 42,412 + -3.5 42,412 + -2.4 42,639 + Ac3H11_606 0.14 -2.1 42,640 - Ac3H11_606 0.14 -3.0 42,648 + Ac3H11_606 0.15 -0.3 42,648 + Ac3H11_606 0.15 -4.2 42,849 + Ac3H11_606 0.34 -3.9 42,849 + Ac3H11_606 0.34 -2.8 42,850 - Ac3H11_606 0.35 -3.1 43,038 + Ac3H11_606 0.53 -4.2 43,048 - Ac3H11_606 0.54 -2.8 43,048 - Ac3H11_606 0.54 -3.7 43,050 + Ac3H11_606 0.54 -3.2 43,050 + Ac3H11_606 0.54 -3.7 43,050 + Ac3H11_606 0.54 -3.1 43,051 - Ac3H11_606 0.54 -0.2 43,051 - Ac3H11_606 0.54 -3.3 43,051 - Ac3H11_606 0.54 -3.1 43,051 - Ac3H11_606 0.54 -4.3 43,178 + Ac3H11_606 0.67 -2.6 43,568 - -3.1 43,632 + -2.7 43,633 - -1.5 43,633 - -4.5 43,779 + Ac3H11_607 0.15 +0.3 43,894 + Ac3H11_607 0.23 -2.5 43,895 - Ac3H11_607 0.23 -2.8 44,428 + Ac3H11_607 0.57 -4.1 44,429 - Ac3H11_607 0.57 -1.7 44,429 - Ac3H11_607 0.57 -5.2
Or see this region's nucleotide sequence