Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_28050 and AO353_28055 are separated by 2 nucleotides AO353_28055 and AO353_28060 overlap by 4 nucleotides
AO353_28050: AO353_28050 - exonuclease SbcC, at 6,113,945 to 6,115,921
_28050
AO353_28055: AO353_28055 - hypothetical protein, at 6,115,924 to 6,116,496
_28055
AO353_28060: AO353_28060 - hypothetical protein, at 6,116,493 to 6,117,707
_28060
Position (kb)
6115
6116
6117 Strain fitness (log2 ratio)
-2
-1
0
1 at 6115.172 kb on + strand, within AO353_28050 at 6115.323 kb on - strand, within AO353_28050 at 6115.654 kb on - strand, within AO353_28050 at 6115.669 kb on - strand, within AO353_28050 at 6115.670 kb on + strand, within AO353_28050 at 6115.831 kb on - strand at 6115.953 kb on - strand at 6116.136 kb on - strand, within AO353_28055 at 6116.142 kb on + strand, within AO353_28055 at 6116.143 kb on - strand, within AO353_28055 at 6116.143 kb on - strand, within AO353_28055 at 6116.197 kb on - strand, within AO353_28055 at 6116.276 kb on + strand, within AO353_28055 at 6116.473 kb on + strand at 6116.586 kb on + strand at 6116.735 kb on - strand, within AO353_28060 at 6116.735 kb on - strand, within AO353_28060 at 6116.767 kb on - strand, within AO353_28060 at 6116.970 kb on - strand, within AO353_28060 at 6116.989 kb on + strand, within AO353_28060 at 6117.063 kb on + strand, within AO353_28060 at 6117.125 kb on - strand, within AO353_28060 at 6117.178 kb on + strand, within AO353_28060 at 6117.178 kb on + strand, within AO353_28060 at 6117.179 kb on - strand, within AO353_28060 at 6117.181 kb on - strand, within AO353_28060 at 6117.181 kb on - strand, within AO353_28060 at 6117.181 kb on - strand, within AO353_28060 at 6117.222 kb on - strand, within AO353_28060 at 6117.222 kb on - strand, within AO353_28060 at 6117.294 kb on + strand, within AO353_28060 at 6117.362 kb on + strand, within AO353_28060 at 6117.393 kb on - strand, within AO353_28060 at 6117.403 kb on - strand, within AO353_28060
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 6,115,172 + AO353_28050 0.62 -0.1 6,115,323 - AO353_28050 0.70 -0.7 6,115,654 - AO353_28050 0.86 -0.5 6,115,669 - AO353_28050 0.87 -0.2 6,115,670 + AO353_28050 0.87 +0.5 6,115,831 - -0.0 6,115,953 - -1.4 6,116,136 - AO353_28055 0.37 -1.9 6,116,142 + AO353_28055 0.38 -1.4 6,116,143 - AO353_28055 0.38 -1.6 6,116,143 - AO353_28055 0.38 -0.0 6,116,197 - AO353_28055 0.48 -1.2 6,116,276 + AO353_28055 0.61 -0.6 6,116,473 + -0.2 6,116,586 + -0.5 6,116,735 - AO353_28060 0.20 -0.5 6,116,735 - AO353_28060 0.20 -0.6 6,116,767 - AO353_28060 0.23 +0.4 6,116,970 - AO353_28060 0.39 +1.4 6,116,989 + AO353_28060 0.41 -0.8 6,117,063 + AO353_28060 0.47 -0.2 6,117,125 - AO353_28060 0.52 -0.0 6,117,178 + AO353_28060 0.56 +0.3 6,117,178 + AO353_28060 0.56 -0.7 6,117,179 - AO353_28060 0.56 +0.4 6,117,181 - AO353_28060 0.57 +1.5 6,117,181 - AO353_28060 0.57 -0.2 6,117,181 - AO353_28060 0.57 -0.1 6,117,222 - AO353_28060 0.60 +0.1 6,117,222 - AO353_28060 0.60 +0.5 6,117,294 + AO353_28060 0.66 -0.1 6,117,362 + AO353_28060 0.72 +0.6 6,117,393 - AO353_28060 0.74 -0.0 6,117,403 - AO353_28060 0.75 +1.5
Or see this region's nucleotide sequence