Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25235 and AO353_25240 are separated by 11 nucleotides AO353_25240 and AO353_25245 are separated by 68 nucleotides AO353_25245 and AO353_25250 are separated by 33 nucleotides
AO353_25235: AO353_25235 - oxidase, at 5,566,461 to 5,567,702
_25235
AO353_25240: AO353_25240 - cytochrome C552, at 5,567,714 to 5,568,352
_25240
AO353_25245: AO353_25245 - regulator, at 5,568,421 to 5,569,053
_25245
AO353_25250: AO353_25250 - histidine kinase, at 5,569,087 to 5,570,448
_25250
Position (kb) 5568
5569
5570 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5567.674 kb on + strand at 5567.885 kb on + strand, within AO353_25240 at 5567.885 kb on + strand, within AO353_25240 at 5567.885 kb on + strand, within AO353_25240 at 5567.886 kb on - strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand at 5567.955 kb on + strand, within AO353_25240 at 5567.955 kb on + strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.956 kb on - strand, within AO353_25240 at 5567.957 kb on + strand, within AO353_25240 at 5567.957 kb on + strand, within AO353_25240 at 5567.957 kb on + strand, within AO353_25240 at 5567.957 kb on + strand, within AO353_25240 at 5567.957 kb on + strand, within AO353_25240 at 5567.958 kb on - strand, within AO353_25240 at 5567.958 kb on - strand, within AO353_25240 at 5567.958 kb on - strand, within AO353_25240 at 5567.958 kb on - strand, within AO353_25240 at 5568.018 kb on - strand, within AO353_25240 at 5568.018 kb on - strand, within AO353_25240 at 5568.048 kb on + strand, within AO353_25240 at 5568.048 kb on + strand, within AO353_25240 at 5568.048 kb on + strand, within AO353_25240 at 5568.048 kb on + strand, within AO353_25240 at 5568.049 kb on - strand, within AO353_25240 at 5568.049 kb on - strand, within AO353_25240 at 5568.049 kb on - strand, within AO353_25240 at 5568.097 kb on - strand, within AO353_25240 at 5568.123 kb on + strand, within AO353_25240 at 5568.124 kb on - strand, within AO353_25240 at 5568.124 kb on - strand, within AO353_25240 at 5568.163 kb on + strand at 5568.163 kb on + strand, within AO353_25240 at 5568.163 kb on + strand, within AO353_25240 at 5568.163 kb on + strand, within AO353_25240 at 5568.164 kb on - strand, within AO353_25240 at 5568.164 kb on - strand, within AO353_25240 at 5568.164 kb on - strand, within AO353_25240 at 5568.164 kb on - strand, within AO353_25240 at 5568.164 kb on - strand, within AO353_25240 at 5568.164 kb on - strand, within AO353_25240 at 5568.171 kb on + strand, within AO353_25240 at 5568.203 kb on + strand, within AO353_25240 at 5568.203 kb on + strand, within AO353_25240 at 5568.204 kb on - strand, within AO353_25240 at 5568.234 kb on + strand, within AO353_25240 at 5568.235 kb on - strand, within AO353_25240 at 5568.303 kb on + strand at 5568.375 kb on + strand at 5568.422 kb on + strand at 5568.422 kb on + strand at 5568.423 kb on - strand at 5568.452 kb on + strand at 5568.452 kb on + strand at 5568.452 kb on + strand at 5568.665 kb on + strand, within AO353_25245 at 5568.737 kb on + strand, within AO353_25245 at 5568.773 kb on + strand, within AO353_25245 at 5568.773 kb on + strand, within AO353_25245 at 5568.773 kb on + strand, within AO353_25245 at 5568.773 kb on + strand, within AO353_25245 at 5568.773 kb on + strand, within AO353_25245 at 5568.774 kb on - strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand at 5568.779 kb on + strand, within AO353_25245 at 5568.779 kb on + strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.780 kb on - strand, within AO353_25245 at 5568.788 kb on + strand, within AO353_25245 at 5568.789 kb on - strand, within AO353_25245 at 5568.800 kb on - strand, within AO353_25245 at 5568.887 kb on - strand, within AO353_25245 at 5569.077 kb on - strand at 5569.210 kb on + strand at 5569.211 kb on - strand at 5569.211 kb on - strand at 5569.279 kb on + strand, within AO353_25250 at 5569.305 kb on + strand, within AO353_25250 at 5569.305 kb on + strand, within AO353_25250 at 5569.306 kb on - strand, within AO353_25250 at 5569.306 kb on - strand, within AO353_25250 at 5569.312 kb on + strand, within AO353_25250 at 5569.312 kb on + strand, within AO353_25250 at 5569.424 kb on + strand, within AO353_25250 at 5569.425 kb on - strand, within AO353_25250 at 5569.425 kb on - strand, within AO353_25250 at 5569.425 kb on - strand, within AO353_25250 at 5569.443 kb on + strand, within AO353_25250 at 5569.444 kb on - strand, within AO353_25250 at 5569.444 kb on - strand, within AO353_25250 at 5569.580 kb on - strand, within AO353_25250 at 5569.658 kb on - strand, within AO353_25250 at 5569.658 kb on - strand, within AO353_25250 at 5569.826 kb on - strand, within AO353_25250 at 5569.914 kb on - strand, within AO353_25250 at 5569.914 kb on - strand, within AO353_25250 at 5569.961 kb on + strand, within AO353_25250 at 5569.961 kb on + strand, within AO353_25250 at 5569.961 kb on + strand, within AO353_25250 at 5569.961 kb on + strand, within AO353_25250 at 5569.961 kb on + strand, within AO353_25250 at 5570.010 kb on - strand, within AO353_25250 at 5570.010 kb on - strand, within AO353_25250
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 5,567,674 + +0.3 5,567,885 + AO353_25240 0.27 +0.9 5,567,885 + AO353_25240 0.27 +0.2 5,567,885 + AO353_25240 0.27 -0.6 5,567,886 - AO353_25240 0.27 +0.2 5,567,955 + AO353_25240 0.38 -0.2 5,567,955 + AO353_25240 0.38 -0.9 5,567,955 + AO353_25240 0.38 +0.2 5,567,955 + AO353_25240 0.38 +0.3 5,567,955 + AO353_25240 0.38 +1.0 5,567,955 + AO353_25240 0.38 -1.0 5,567,955 + AO353_25240 0.38 +0.4 5,567,955 + AO353_25240 0.38 -0.0 5,567,955 + AO353_25240 0.38 -0.3 5,567,955 + AO353_25240 0.38 -0.7 5,567,955 + AO353_25240 0.38 +0.4 5,567,955 + AO353_25240 0.38 +0.4 5,567,955 + AO353_25240 0.38 +0.2 5,567,955 + AO353_25240 0.38 +0.8 5,567,955 + AO353_25240 0.38 +0.2 5,567,955 + AO353_25240 0.38 +1.0 5,567,955 + AO353_25240 0.38 +0.3 5,567,955 + AO353_25240 0.38 +0.3 5,567,955 + AO353_25240 0.38 -0.1 5,567,955 + AO353_25240 0.38 +0.4 5,567,955 + +1.8 5,567,955 + AO353_25240 0.38 -0.2 5,567,955 + AO353_25240 0.38 -0.1 5,567,956 - AO353_25240 0.38 -0.6 5,567,956 - AO353_25240 0.38 -0.9 5,567,956 - AO353_25240 0.38 -1.5 5,567,956 - AO353_25240 0.38 +0.5 5,567,956 - AO353_25240 0.38 -0.4 5,567,956 - AO353_25240 0.38 -0.6 5,567,956 - AO353_25240 0.38 +0.4 5,567,956 - AO353_25240 0.38 -1.2 5,567,956 - AO353_25240 0.38 +0.8 5,567,956 - AO353_25240 0.38 -0.2 5,567,956 - AO353_25240 0.38 -1.1 5,567,956 - AO353_25240 0.38 -0.2 5,567,956 - AO353_25240 0.38 +0.3 5,567,956 - AO353_25240 0.38 -0.5 5,567,956 - AO353_25240 0.38 +1.0 5,567,956 - AO353_25240 0.38 -0.2 5,567,956 - AO353_25240 0.38 +0.9 5,567,956 - AO353_25240 0.38 +0.2 5,567,956 - AO353_25240 0.38 +0.5 5,567,956 - AO353_25240 0.38 +0.9 5,567,956 - AO353_25240 0.38 -0.3 5,567,957 + AO353_25240 0.38 -0.2 5,567,957 + AO353_25240 0.38 -0.7 5,567,957 + AO353_25240 0.38 +1.2 5,567,957 + AO353_25240 0.38 -0.6 5,567,957 + AO353_25240 0.38 +0.1 5,567,958 - AO353_25240 0.38 +0.5 5,567,958 - AO353_25240 0.38 -0.6 5,567,958 - AO353_25240 0.38 -1.2 5,567,958 - AO353_25240 0.38 +0.3 5,568,018 - AO353_25240 0.48 +1.6 5,568,018 - AO353_25240 0.48 -0.8 5,568,048 + AO353_25240 0.52 -0.7 5,568,048 + AO353_25240 0.52 +1.0 5,568,048 + AO353_25240 0.52 +1.4 5,568,048 + AO353_25240 0.52 +1.4 5,568,049 - AO353_25240 0.52 -1.0 5,568,049 - AO353_25240 0.52 -0.4 5,568,049 - AO353_25240 0.52 -2.0 5,568,097 - AO353_25240 0.60 +0.4 5,568,123 + AO353_25240 0.64 +1.8 5,568,124 - AO353_25240 0.64 +0.0 5,568,124 - AO353_25240 0.64 -0.3 5,568,163 + -1.4 5,568,163 + AO353_25240 0.70 -0.8 5,568,163 + AO353_25240 0.70 +1.2 5,568,163 + AO353_25240 0.70 +0.2 5,568,164 - AO353_25240 0.70 -0.8 5,568,164 - AO353_25240 0.70 -0.2 5,568,164 - AO353_25240 0.70 -0.3 5,568,164 - AO353_25240 0.70 +0.3 5,568,164 - AO353_25240 0.70 -1.6 5,568,164 - AO353_25240 0.70 -0.2 5,568,171 + AO353_25240 0.72 +1.2 5,568,203 + AO353_25240 0.77 -0.0 5,568,203 + AO353_25240 0.77 +1.0 5,568,204 - AO353_25240 0.77 -0.3 5,568,234 + AO353_25240 0.81 -0.2 5,568,235 - AO353_25240 0.82 +0.3 5,568,303 + +0.0 5,568,375 + -0.1 5,568,422 + -0.1 5,568,422 + -0.6 5,568,423 - +1.2 5,568,452 + +0.4 5,568,452 + -2.0 5,568,452 + -0.5 5,568,665 + AO353_25245 0.39 -1.4 5,568,737 + AO353_25245 0.50 +1.2 5,568,773 + AO353_25245 0.56 -0.4 5,568,773 + AO353_25245 0.56 -4.2 5,568,773 + AO353_25245 0.56 +0.4 5,568,773 + AO353_25245 0.56 -2.1 5,568,773 + AO353_25245 0.56 -1.2 5,568,774 - AO353_25245 0.56 -1.4 5,568,779 + AO353_25245 0.57 +0.8 5,568,779 + AO353_25245 0.57 -1.2 5,568,779 + AO353_25245 0.57 -0.8 5,568,779 + AO353_25245 0.57 -0.0 5,568,779 + AO353_25245 0.57 -0.9 5,568,779 + AO353_25245 0.57 -1.9 5,568,779 + AO353_25245 0.57 -1.5 5,568,779 + AO353_25245 0.57 -0.2 5,568,779 + AO353_25245 0.57 +0.5 5,568,779 + +0.2 5,568,779 + AO353_25245 0.57 -0.9 5,568,779 + AO353_25245 0.57 -1.2 5,568,780 - AO353_25245 0.57 -1.3 5,568,780 - AO353_25245 0.57 -2.0 5,568,780 - AO353_25245 0.57 -0.8 5,568,780 - AO353_25245 0.57 -1.9 5,568,780 - AO353_25245 0.57 -1.7 5,568,780 - AO353_25245 0.57 -1.8 5,568,780 - AO353_25245 0.57 -0.0 5,568,780 - AO353_25245 0.57 -1.1 5,568,780 - AO353_25245 0.57 -0.7 5,568,780 - AO353_25245 0.57 -0.8 5,568,780 - AO353_25245 0.57 -0.5 5,568,780 - AO353_25245 0.57 -1.9 5,568,788 + AO353_25245 0.58 -0.2 5,568,789 - AO353_25245 0.58 -2.1 5,568,800 - AO353_25245 0.60 -0.7 5,568,887 - AO353_25245 0.74 -0.8 5,569,077 - +0.2 5,569,210 + -1.9 5,569,211 - -0.4 5,569,211 - -1.1 5,569,279 + AO353_25250 0.14 -1.4 5,569,305 + AO353_25250 0.16 -0.6 5,569,305 + AO353_25250 0.16 -0.8 5,569,306 - AO353_25250 0.16 +0.1 5,569,306 - AO353_25250 0.16 +1.3 5,569,312 + AO353_25250 0.17 -0.1 5,569,312 + AO353_25250 0.17 -0.1 5,569,424 + AO353_25250 0.25 -0.6 5,569,425 - AO353_25250 0.25 -1.4 5,569,425 - AO353_25250 0.25 -1.0 5,569,425 - AO353_25250 0.25 +1.0 5,569,443 + AO353_25250 0.26 -0.7 5,569,444 - AO353_25250 0.26 -0.0 5,569,444 - AO353_25250 0.26 -0.2 5,569,580 - AO353_25250 0.36 -1.1 5,569,658 - AO353_25250 0.42 -0.5 5,569,658 - AO353_25250 0.42 -1.8 5,569,826 - AO353_25250 0.54 -1.5 5,569,914 - AO353_25250 0.61 -0.3 5,569,914 - AO353_25250 0.61 -1.3 5,569,961 + AO353_25250 0.64 -1.9 5,569,961 + AO353_25250 0.64 -2.0 5,569,961 + AO353_25250 0.64 -1.6 5,569,961 + AO353_25250 0.64 -1.8 5,569,961 + AO353_25250 0.64 +0.4 5,570,010 - AO353_25250 0.68 -0.8 5,570,010 - AO353_25250 0.68 -1.8
Or see this region's nucleotide sequence