Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13420

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
2,973,268	+				+0.2
2,973,269	-				+0.7
2,973,269	-				+0.1
2,973,269	-				-0.3
2,973,269	-				-0.9
2,973,269	-				+0.5
2,973,289	+				-0.6
2,973,289	+				+0.9
2,973,289	+				+0.9
2,973,289	+				+1.5
2,973,289	+				-0.4
2,973,289	+				+0.1
2,973,290	-				-1.2
2,973,290	-				+0.6
2,973,290	-				+0.9
2,973,290	-				-0.1
2,973,323	+				+0.2
2,973,323	+				-0.1
2,973,323	+				-1.1
2,973,323	+				-1.1
2,973,324	-				-0.4
2,973,324	-				+2.1
2,973,324	-				-0.1
2,973,324	-				-1.6
2,973,324	-				+0.5
2,973,357	+				+0.6
2,973,357	+				-2.0
2,973,357	+				+0.0
2,973,357	+				+0.3
2,973,357	+				-0.4
2,973,357	+				-0.8
2,973,357	+				-0.5
2,973,357	+				-0.4
2,973,357	+				+0.7
2,973,357	+				-1.1
2,973,357	+				+0.3
2,973,358	-				-0.5
2,973,358	-				-0.3
2,973,358	-				-0.3
2,973,358	-				-1.6
2,973,358	-				-0.4
2,973,358	-				-2.0
2,973,358	-				-0.2
2,973,358	-				-0.4
2,973,358	-				+1.1
2,973,358	-				-1.1
2,973,358	-				-0.9
2,973,358	-				-0.5
2,973,358	-				+0.2
2,973,358	-				+0.2
2,973,358	-				-1.6
2,973,358	-				-1.4
2,973,358	-				+1.4
2,973,358	-				-0.1
2,973,372	-				+0.9
2,973,523	+				-0.4
2,973,523	+				+0.2
2,973,524	-				-0.4
2,973,524	-				+0.8
2,973,524	-				+0.9
2,973,768	+		AO353_13415	0.46	-0.2
2,973,815	+		AO353_13415	0.54	+0.4
2,973,815	+		AO353_13415	0.54	-0.2
2,973,815	+		AO353_13415	0.54	+0.5
2,973,815	+		AO353_13415	0.54	-0.9
2,973,815	+		AO353_13415	0.54	-0.1
2,973,815	+		AO353_13415	0.54	-1.3
2,973,815	+		AO353_13415	0.54	+0.5
2,973,815	+		AO353_13415	0.54	-0.5
2,973,815	+		AO353_13415	0.54	-0.5
2,973,816	-		AO353_13415	0.54	-0.1
2,973,816	-		AO353_13415	0.54	-1.0
2,973,936	-		AO353_13415	0.73	+0.1
2,973,936	-		AO353_13415	0.73	+0.7
2,973,936	-		AO353_13415	0.73	-0.1
2,973,982	+		AO353_13415	0.80	-0.3
2,973,982	+		AO353_13415	0.80	-0.1
2,973,982	+		AO353_13415	0.80	+0.4
2,974,013	+		AO353_13415	0.85	-2.3
2,974,013	+		AO353_13415	0.85	+0.3
2,974,014	-		AO353_13415	0.85	-0.3
2,974,014	-		AO353_13415	0.85	-0.8
2,974,014	-		AO353_13415	0.85	-0.8
2,974,014	-		AO353_13415	0.85	+0.8
2,974,124	+				+0.6
2,974,124	+				+0.5
2,974,125	-				-0.3
2,974,125	-				+0.7
2,974,125	-				+0.3
2,974,125	-				-0.1
2,974,125	-				-1.6
2,974,125	-				-0.0
2,974,125	-				-1.5
2,974,147	+				-2.0
2,974,147	+				+0.8
2,974,148	-				+0.0
2,974,148	-				+0.6
2,974,148	-				+0.1
2,974,148	-				-1.1
2,974,202	+				+0.5
2,974,202	+				-0.5
2,974,202	+				+1.7
2,974,203	-				-0.4
2,974,203	-				-0.6
2,974,203	-				-0.5
2,974,203	-				-0.9
2,974,203	-				-0.5
2,974,203	-				-2.8
2,974,209	+				+1.7
2,974,209	+				-0.8
2,974,209	+				-1.2
2,974,209	+				+0.4
2,974,209	+				-1.3
2,974,209	+				-0.7
2,974,209	+				-1.1
2,974,210	-				-0.5
2,974,210	-				-0.0
2,974,210	-				+0.4
2,974,210	-				-0.1
2,974,210	-				+1.9
2,974,210	-				-0.8
2,974,213	+				+2.1
2,974,213	+				-0.6
2,974,213	+				-0.5
2,974,213	+				-0.5
2,974,213	+				-0.6
2,974,213	+				-0.5
2,974,213	+				-0.1
2,974,213	+				-0.7
2,974,213	+				+0.1
2,974,213	+				+0.7
2,974,214	-				-0.2
2,974,214	-				+0.2
2,974,214	-				-0.4
2,974,214	-				+0.0
2,974,214	-				-1.3
2,974,214	-				-0.3
2,974,214	-				+0.0
2,974,214	-				-0.6
2,974,214	-				-0.7
2,974,214	-				-0.2
2,974,214	-				+1.4
2,974,214	-				-0.3
2,974,214	-				-0.8
2,974,214	-				-0.9
2,974,267	+				+0.2
2,974,267	+				-0.2
2,974,267	+				+0.5
2,974,268	-				-2.3
2,974,268	-				-1.2
2,974,268	-				-0.7
2,974,268	-				+0.1
2,974,268	-				-0.1
2,974,268	-				+0.6
2,974,338	-		AO353_13420	0.14	-1.5
2,974,338	-		AO353_13420	0.14	+0.4
2,974,597	+		AO353_13420	0.64	-0.6
2,974,597	+		AO353_13420	0.64	+0.9
2,974,640	+		AO353_13420	0.72	+0.7
2,974,672	+		AO353_13420	0.78	-1.8
2,974,743	+				+0.1
2,974,763	+				-0.3
2,974,770	+				+3.3
2,974,770	+				-0.1
2,974,770	+				-0.9
2,974,770	+				-0.2
2,974,770	+				-0.6
2,974,770	+				+0.3
2,974,770	+				+1.4
2,974,770	+				+0.4
2,974,771	-				-0.2
2,974,771	-				+0.4
2,974,808	+				+1.1
2,974,808	+				+0.1
2,974,809	-				-1.7
2,974,810	+				+0.2
2,974,810	+				+0.7
2,974,810	+				-0.5
2,974,810	+				-0.0
2,974,810	+				+1.2
2,974,810	+				+0.1
2,974,810	+				+0.7
2,974,810	+				-0.3
2,974,811	-				-1.4
2,974,811	-				-1.8
2,974,811	-				+0.1
2,974,827	+				+0.1
2,974,827	+				+0.2
2,974,828	-				+0.6
2,974,828	-				-0.4
2,974,828	-				-0.4
2,974,828	-				+0.1
2,974,828	-				-0.2
2,974,828	-				+1.1
2,974,833	+				-0.6
2,974,833	+				+0.4
2,974,834	-				-1.6
2,974,842	+				-1.4
2,974,852	+				-0.8
2,974,852	+				-0.0
2,974,852	+				+0.1
2,974,853	-				+0.4
2,974,853	-				+0.5
2,974,874	+				+0.7
2,974,875	-				-0.5
2,974,875	-				-0.2
2,974,875	-				-0.2
2,974,877	+				+0.4
2,974,878	-				-1.7
2,974,912	+				+1.1
2,974,912	+				+0.7
2,974,954	+				-0.9
2,974,955	-				-0.8
2,974,955	-				-0.0
2,975,058	+				+0.4
2,975,084	+				+0.1
2,975,084	+				+0.5
2,975,084	+				+1.7
2,975,084	+				-0.1
2,975,084	+				+0.9
2,975,084	+				+1.0
2,975,084	+				-0.5
2,975,085	-				+0.5
2,975,085	-				+0.5
2,975,085	-				+1.1
2,975,085	-				-0.4
2,975,085	-				-0.5
2,975,091	+				+0.8
2,975,091	+				+0.1
2,975,091	+				+0.0
2,975,091	+				+0.4
2,975,092	-				+0.3
2,975,092	-				-0.2
2,975,092	-				-0.5
2,975,092	-				-0.9
2,975,092	-				-0.1
2,975,092	-				-0.1
2,975,092	-				+0.6
2,975,092	-				-0.4
2,975,092	-				+0.1
2,975,094	-				+0.3
2,975,094	-				-0.6
2,975,122	+				-0.9
2,975,122	+				+0.6
2,975,122	+				-0.1
2,975,122	+				-0.4
2,975,122	+				+0.6
2,975,122	+				-0.5
2,975,122	+				+0.1
2,975,123	-				+0.5
2,975,123	-				+0.4
2,975,123	-				-1.0
2,975,123	-				+0.0
2,975,646	-		AO353_13425	0.23	-1.4
2,975,646	-		AO353_13425	0.23	+0.9
2,975,646	-		AO353_13425	0.23	+0.5
2,975,646	-		AO353_13425	0.23	+0.5
2,975,772	+		AO353_13425	0.29	-0.4
2,975,773	-		AO353_13425	0.29	+0.4