Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE53_003948 and ABIE53_003949 are separated by 367 nucleotides ABIE53_003949 and ABIE53_003950 are separated by 116 nucleotides
ABIE53_003948: ABIE53_003948 - NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family), at 97,224 to 98,108
_003948
ABIE53_003949: ABIE53_003949 - uracil-DNA glycosylase, at 98,476 to 99,060
_003949
ABIE53_003950: ABIE53_003950 - FMN-dependent oxidoreductase (nitrilotriacetate monooxygenase family), at 99,177 to 100,532
_003950
Position (kb) 98
99
100 Strain fitness (log2 ratio) -1
0
1
2
3 at 97.507 kb on + strand, within ABIE53_003948 at 97.508 kb on - strand, within ABIE53_003948 at 97.508 kb on - strand, within ABIE53_003948 at 97.639 kb on - strand, within ABIE53_003948 at 97.660 kb on + strand, within ABIE53_003948 at 97.966 kb on + strand, within ABIE53_003948 at 98.010 kb on - strand, within ABIE53_003948 at 98.085 kb on - strand at 98.122 kb on + strand at 98.123 kb on - strand at 98.140 kb on + strand at 98.141 kb on - strand at 98.141 kb on - strand at 98.231 kb on + strand at 98.231 kb on + strand at 98.231 kb on + strand at 98.231 kb on + strand at 98.232 kb on - strand at 98.232 kb on - strand at 98.232 kb on - strand at 98.236 kb on - strand at 98.236 kb on - strand at 98.267 kb on + strand at 98.352 kb on + strand at 98.353 kb on - strand at 98.353 kb on - strand at 98.353 kb on - strand at 98.353 kb on - strand at 98.353 kb on - strand at 98.358 kb on - strand at 98.358 kb on - strand at 98.398 kb on + strand at 98.399 kb on - strand at 98.399 kb on - strand at 98.399 kb on - strand at 98.404 kb on + strand at 98.404 kb on + strand at 98.405 kb on - strand at 98.405 kb on - strand at 98.692 kb on + strand, within ABIE53_003949 at 98.692 kb on + strand, within ABIE53_003949 at 98.693 kb on - strand, within ABIE53_003949 at 98.735 kb on - strand, within ABIE53_003949 at 98.851 kb on + strand, within ABIE53_003949 at 98.851 kb on + strand, within ABIE53_003949 at 98.852 kb on - strand, within ABIE53_003949 at 99.069 kb on + strand at 99.069 kb on + strand at 99.069 kb on + strand at 99.069 kb on + strand at 99.070 kb on - strand at 99.070 kb on - strand at 99.070 kb on - strand at 99.073 kb on + strand at 99.073 kb on + strand at 99.073 kb on + strand at 99.073 kb on + strand at 99.073 kb on + strand at 99.074 kb on - strand at 99.074 kb on - strand at 99.074 kb on - strand at 99.076 kb on - strand at 99.089 kb on - strand at 99.220 kb on + strand at 99.297 kb on + strand at 99.297 kb on + strand at 99.298 kb on - strand at 99.481 kb on - strand, within ABIE53_003950 at 99.481 kb on - strand, within ABIE53_003950 at 99.481 kb on - strand, within ABIE53_003950 at 99.481 kb on - strand, within ABIE53_003950 at 99.482 kb on + strand, within ABIE53_003950 at 99.492 kb on + strand, within ABIE53_003950 at 99.627 kb on + strand, within ABIE53_003950 at 99.674 kb on + strand, within ABIE53_003950 at 99.765 kb on + strand, within ABIE53_003950 at 99.765 kb on + strand, within ABIE53_003950 at 99.766 kb on - strand, within ABIE53_003950
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 97,507 + ABIE53_003948 0.32 -0.4 97,508 - ABIE53_003948 0.32 +1.2 97,508 - ABIE53_003948 0.32 -0.8 97,639 - ABIE53_003948 0.47 -1.6 97,660 + ABIE53_003948 0.49 +0.6 97,966 + ABIE53_003948 0.84 +0.6 98,010 - ABIE53_003948 0.89 -0.4 98,085 - -1.6 98,122 + +0.8 98,123 - +2.2 98,140 + +0.6 98,141 - -1.1 98,141 - -0.7 98,231 + +1.2 98,231 + -0.1 98,231 + +0.4 98,231 + +0.6 98,232 - -0.8 98,232 - +0.6 98,232 - +0.2 98,236 - -0.6 98,236 - -0.6 98,267 + +0.9 98,352 + +0.5 98,353 - -0.9 98,353 - -0.8 98,353 - -1.1 98,353 - -0.8 98,353 - +1.2 98,358 - +1.2 98,358 - -0.5 98,398 + +0.8 98,399 - -0.3 98,399 - +0.2 98,399 - +0.2 98,404 + +0.6 98,404 + -1.3 98,405 - -0.4 98,405 - -1.0 98,692 + ABIE53_003949 0.37 +0.2 98,692 + ABIE53_003949 0.37 +0.9 98,693 - ABIE53_003949 0.37 -1.4 98,735 - ABIE53_003949 0.44 -0.5 98,851 + ABIE53_003949 0.64 -0.7 98,851 + ABIE53_003949 0.64 -1.1 98,852 - ABIE53_003949 0.64 -1.5 99,069 + +1.1 99,069 + +0.2 99,069 + -1.6 99,069 + +1.2 99,070 - +1.8 99,070 - -0.6 99,070 - -0.1 99,073 + -0.1 99,073 + -0.4 99,073 + -1.0 99,073 + -0.1 99,073 + -1.4 99,074 - -1.7 99,074 - +0.2 99,074 - +0.9 99,076 - +1.3 99,089 - -1.0 99,220 + +2.2 99,297 + -1.1 99,297 + +0.4 99,298 - -0.5 99,481 - ABIE53_003950 0.22 +0.6 99,481 - ABIE53_003950 0.22 +0.9 99,481 - ABIE53_003950 0.22 +0.2 99,481 - ABIE53_003950 0.22 +0.2 99,482 + ABIE53_003950 0.22 +3.6 99,492 + ABIE53_003950 0.23 -0.1 99,627 + ABIE53_003950 0.33 +0.1 99,674 + ABIE53_003950 0.37 +2.2 99,765 + ABIE53_003950 0.43 +1.6 99,765 + ABIE53_003950 0.43 -1.1 99,766 - ABIE53_003950 0.43 +0.2
Or see this region's nucleotide sequence