Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002066

Experiment: m-Inositol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m-Inositol (C)
2,315,623	+		ABIE53_002065	0.38	+0.3
2,315,623	+		ABIE53_002065	0.38	-0.6
2,315,623	+		ABIE53_002065	0.38	+1.0
2,315,623	+		ABIE53_002065	0.38	-0.3
2,315,623	+		ABIE53_002065	0.38	-0.9
2,315,623	+		ABIE53_002065	0.38	-0.0
2,315,623	+		ABIE53_002065	0.38	-1.3
2,315,623	+		ABIE53_002065	0.38	-2.1
2,315,623	+		ABIE53_002065	0.38	-0.9
2,315,623	+		ABIE53_002065	0.38	+0.6
2,315,623	+		ABIE53_002065	0.38	-0.4
2,315,623	+		ABIE53_002065	0.38	+0.7
2,315,624	-		ABIE53_002065	0.38	-0.7
2,315,624	-		ABIE53_002065	0.38	-2.1
2,315,624	-		ABIE53_002065	0.38	+0.3
2,315,624	-		ABIE53_002065	0.38	+2.3
2,315,624	-		ABIE53_002065	0.38	-2.7
2,315,624	-		ABIE53_002065	0.38	-0.3
2,315,624	-		ABIE53_002065	0.38	-0.9
2,315,624	-		ABIE53_002065	0.38	-0.5
2,315,624	-		ABIE53_002065	0.38	-0.5
2,315,624	-		ABIE53_002065	0.38	-1.2
2,315,624	-		ABIE53_002065	0.38	-0.3
2,315,624	-		ABIE53_002065	0.38	+0.3
2,315,632	+		ABIE53_002065	0.39	-1.0
2,315,632	+		ABIE53_002065	0.39	-1.0
2,315,632	+		ABIE53_002065	0.39	-1.3
2,315,632	+		ABIE53_002065	0.39	-1.7
2,315,633	-		ABIE53_002065	0.39	-1.2
2,316,502	+				-1.5
2,316,502	+				-0.7
2,316,502	+				-0.0
2,316,503	-				-0.0
2,316,503	-				-2.0
2,316,556	+				-0.7
2,316,556	+				-2.2
2,316,556	+				+1.3
2,316,556	+				-0.9
2,316,556	+				-0.6
2,316,556	+				-0.3
2,316,556	+				-2.2
2,316,557	-				+0.7
2,316,557	-				+1.3
2,316,557	-				-1.7
2,316,557	-				-1.5
2,316,561	+				-0.3
2,316,561	+				-0.7
2,316,562	-				+0.7
2,316,562	-				-0.3
2,316,562	-				-2.2
2,316,580	+				+0.7
2,316,580	+				-2.2
2,316,580	+				-0.5
2,316,580	+				-0.7
2,316,581	-				-1.3
2,316,581	-				-1.5
2,316,581	-				+2.3
2,316,581	-				-0.5
2,316,581	-				-0.3
2,316,581	-				-0.8
2,316,584	+				-0.0
2,316,584	+				+1.7
2,316,584	+				-0.7
2,316,585	-				+1.3
2,316,585	-				-2.1
2,316,585	-				-2.7
2,316,585	-				+0.4
2,316,585	-				+2.3
2,316,644	-		ABIE53_002066	0.11	+0.7
2,316,644	-		ABIE53_002066	0.11	+0.9
2,316,972	+		ABIE53_002066	0.55	-1.1
2,316,972	+		ABIE53_002066	0.55	+0.3
2,316,972	+		ABIE53_002066	0.55	-0.3
2,316,972	+		ABIE53_002066	0.55	+0.7
2,316,972	+		ABIE53_002066	0.55	-3.1
2,316,972	+		ABIE53_002066	0.55	+0.3
2,316,972	+		ABIE53_002066	0.55	-1.2
2,316,972	+		ABIE53_002066	0.55	-2.2
2,316,973	-		ABIE53_002066	0.55	+0.3
2,316,973	-		ABIE53_002066	0.55	+1.3
2,317,018	+		ABIE53_002066	0.62	-0.3
2,317,018	+		ABIE53_002066	0.62	+0.3
2,317,018	+		ABIE53_002066	0.62	+0.3
2,317,018	+		ABIE53_002066	0.62	+1.3
2,317,018	+		ABIE53_002066	0.62	-1.9
2,317,018	+		ABIE53_002066	0.62	-1.0
2,317,018	+		ABIE53_002066	0.62	-2.9
2,317,018	+		ABIE53_002066	0.62	-1.7
2,317,018	+		ABIE53_002066	0.62	-0.3
2,317,019	-		ABIE53_002066	0.62	-0.9
2,317,114	+		ABIE53_002066	0.74	-0.9
2,317,114	+		ABIE53_002066	0.74	-3.0
2,317,114	+		ABIE53_002066	0.74	-1.6
2,317,115	-		ABIE53_002066	0.75	-1.7
2,317,115	-		ABIE53_002066	0.75	-3.1
2,317,115	-		ABIE53_002066	0.75	-1.2
2,317,293	+				-0.5
2,317,294	-				-0.3
2,317,408	+				+0.3
2,317,409	-				+0.7
2,317,409	-				-1.3
2,317,427	+				-2.0
2,317,427	+				-2.1
2,317,427	+				-1.7
2,317,428	-				+1.5
2,317,428	-				+0.3
2,317,428	-				-1.3
2,317,428	-				+0.3
2,317,435	+				-1.7
2,317,435	+				-0.3
2,317,435	+				-0.9
2,317,435	+				-0.9
2,317,435	+				-1.6
2,317,436	-				-1.6
2,317,436	-				+0.7
2,317,436	-				+1.3
2,317,436	-				+3.3
2,317,436	-				-0.0
2,317,438	+				-0.1
2,317,438	+				-2.8
2,317,438	+				-1.3
2,317,438	+				+1.7
2,317,439	-				-1.6
2,317,439	-				+1.3
2,317,439	-				-2.5
2,317,439	-				+1.3
2,317,439	-				-0.2
2,317,439	-				-0.5
2,317,439	-				+2.3
2,317,439	-				-0.5
2,317,441	+				-2.7
2,317,441	+				-2.6
2,317,441	+				+1.3
2,317,441	+				-2.3
2,317,441	+				-1.0
2,317,442	-				-0.7
2,317,475	+				-2.9
2,317,476	-				-3.3
2,317,493	+		ABIE53_002067	0.10	-0.5
2,317,493	+		ABIE53_002067	0.10	-0.9
2,317,494	-		ABIE53_002067	0.10	-2.7
2,317,494	-		ABIE53_002067	0.10	-3.0
2,317,494	-		ABIE53_002067	0.10	-1.5
2,317,494	-		ABIE53_002067	0.10	-1.3
2,317,514	+		ABIE53_002067	0.14	-1.2
2,317,514	+		ABIE53_002067	0.14	-1.0
2,317,514	+		ABIE53_002067	0.14	-3.0
2,317,514	+		ABIE53_002067	0.14	-0.0
2,317,514	+		ABIE53_002067	0.14	-2.4
2,317,514	+		ABIE53_002067	0.14	-1.4
2,317,514	+		ABIE53_002067	0.14	-0.0
2,317,514	+		ABIE53_002067	0.14	-1.2
2,317,514	+		ABIE53_002067	0.14	-0.3
2,317,514	+		ABIE53_002067	0.14	-1.5
2,317,514	+		ABIE53_002067	0.14	-0.4
2,317,514	+		ABIE53_002067	0.14	-2.1
2,317,514	+		ABIE53_002067	0.14	+0.7
2,317,514	+		ABIE53_002067	0.14	-1.2
2,317,514	+		ABIE53_002067	0.14	+2.3
2,317,514	+		ABIE53_002067	0.14	-1.0
2,317,515	-		ABIE53_002067	0.14	+1.6
2,317,515	-		ABIE53_002067	0.14	-1.3
2,317,515	-		ABIE53_002067	0.14	+0.7
2,317,515	-		ABIE53_002067	0.14	-2.3
2,317,515	-		ABIE53_002067	0.14	+0.6
2,317,515	-		ABIE53_002067	0.14	-1.8
2,317,515	-		ABIE53_002067	0.14	-2.9
2,317,515	-		ABIE53_002067	0.14	-1.3
2,317,724	+		ABIE53_002067	0.48	-1.3
2,317,724	+		ABIE53_002067	0.48	-0.3
2,317,724	+		ABIE53_002067	0.48	-0.0
2,317,724	+		ABIE53_002067	0.48	-1.2
2,317,724	+		ABIE53_002067	0.48	+0.3
2,317,725	-		ABIE53_002067	0.48	-0.3
2,317,725	-		ABIE53_002067	0.48	-1.7
2,317,725	-		ABIE53_002067	0.48	-0.0
2,317,725	-		ABIE53_002067	0.48	-0.7
2,317,725	-		ABIE53_002067	0.48	+0.7
2,317,725	-		ABIE53_002067	0.48	+0.7
2,317,793	+		ABIE53_002067	0.59	-0.3
2,317,793	+		ABIE53_002067	0.59	-1.9
2,317,793	+		ABIE53_002067	0.59	-0.8
2,317,793	+		ABIE53_002067	0.59	+0.7
2,317,794	-		ABIE53_002067	0.59	+0.3
2,317,794	-		ABIE53_002067	0.59	+0.8
2,317,794	-		ABIE53_002067	0.59	-1.3
2,317,794	-		ABIE53_002067	0.59	-0.4
2,317,877	+		ABIE53_002067	0.73	-1.9
2,317,877	+		ABIE53_002067	0.73	-1.9
2,317,877	+		ABIE53_002067	0.73	-2.1
2,317,877	+		ABIE53_002067	0.73	+1.3
2,317,877	+		ABIE53_002067	0.73	-0.0
2,317,877	+		ABIE53_002067	0.73	-2.7
2,317,878	-		ABIE53_002067	0.73	-0.5
2,317,878	-		ABIE53_002067	0.73	+0.6
2,317,878	-		ABIE53_002067	0.73	-0.9
2,317,878	-		ABIE53_002067	0.73	-0.6
2,317,999	+				-0.9
2,317,999	+				-0.4
2,318,044	+				+2.3
2,318,044	+				-0.5
2,318,044	+				-0.9
2,318,044	+				-0.4
2,318,045	-				+0.7
2,318,045	-				+0.7
2,318,045	-				-0.9
2,318,045	-				-0.5
2,318,045	-				-0.9
2,318,045	-				-0.1
2,318,045	-				-0.2
2,318,045	-				+0.1
2,318,045	-				+1.0
2,318,045	-				+1.3
2,318,045	-				-0.5
2,318,182	+				-0.9
2,318,183	-				+0.3
2,318,183	-				+0.1
2,318,183	-				+0.7
2,318,183	-				-0.3
2,318,183	-				-1.0
2,318,183	-				-1.3