Strain Fitness in Pantoea sp. MT58 around IAI47_17390

Experiment: copper (II) chloride 2 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 uM, anaerobic
3,680,046	+		IAI47_17375	0.73	-1.5
3,680,047	-		IAI47_17375	0.73	+0.8
3,680,047	-		IAI47_17375	0.73	-0.6
3,680,099	+		IAI47_17375	0.76	+3.1
3,680,099	+		IAI47_17375	0.76	-0.5
3,680,099	+		IAI47_17375	0.76	+0.8
3,680,099	+		IAI47_17375	0.76	+0.4
3,680,099	+		IAI47_17375	0.76	-0.2
3,680,099	+		IAI47_17375	0.76	+2.2
3,680,099	+		IAI47_17375	0.76	-1.0
3,680,100	-		IAI47_17375	0.76	+0.5
3,680,100	-		IAI47_17375	0.76	-0.9
3,680,100	-		IAI47_17375	0.76	+0.3
3,680,123	-		IAI47_17375	0.77	-0.6
3,680,124	+		IAI47_17375	0.77	-1.8
3,680,125	-		IAI47_17375	0.77	+0.0
3,680,136	+		IAI47_17375	0.78	-1.0
3,680,136	+		IAI47_17375	0.78	+1.2
3,680,136	+		IAI47_17375	0.78	-0.1
3,680,137	-		IAI47_17375	0.78	+2.4
3,680,142	+		IAI47_17375	0.78	+0.5
3,680,142	+		IAI47_17375	0.78	-0.8
3,680,142	+		IAI47_17375	0.78	+1.2
3,680,142	+		IAI47_17375	0.78	-0.7
3,680,142	+		IAI47_17375	0.78	+3.1
3,680,142	+		IAI47_17375	0.78	-0.5
3,680,143	-		IAI47_17375	0.78	-0.2
3,680,143	-		IAI47_17375	0.78	+0.7
3,680,143	-		IAI47_17375	0.78	-1.5
3,680,143	-		IAI47_17375	0.78	-0.2
3,680,143	-		IAI47_17375	0.78	-0.7
3,680,143	-		IAI47_17375	0.78	-1.1
3,680,200	+		IAI47_17375	0.81	+0.6
3,680,200	+		IAI47_17375	0.81	-0.4
3,680,201	-		IAI47_17375	0.81	-0.7
3,680,201	-		IAI47_17375	0.81	-0.8
3,680,201	-		IAI47_17375	0.81	-0.7
3,680,271	+		IAI47_17375	0.85	+0.9
3,680,271	+		IAI47_17375	0.85	+0.1
3,680,272	-		IAI47_17375	0.85	+0.9
3,680,272	-		IAI47_17375	0.85	-0.1
3,680,280	-		IAI47_17375	0.86	-0.9
3,680,280	-		IAI47_17375	0.86	+0.4
3,680,280	-		IAI47_17375	0.86	-1.0
3,680,280	-		IAI47_17375	0.86	+1.3
3,680,280	-		IAI47_17375	0.86	+0.0
3,680,501	+				+0.2
3,680,501	+				-0.3
3,680,501	+				-0.7
3,680,501	+				+0.1
3,680,501	+				+1.0
3,680,501	+				+0.5
3,680,501	+				+0.8
3,680,502	-				+0.9
3,680,502	-				+0.1
3,680,502	-				+1.0
3,680,502	-				+0.8
3,680,505	-				-1.1
3,680,505	-				-0.1
3,680,515	+				+0.1
3,680,515	+				+1.5
3,680,515	+				+0.4
3,680,515	+				-0.3
3,680,515	+				-1.8
3,680,515	+				-2.7
3,680,515	+				+1.4
3,680,515	+				+0.7
3,680,515	+				-0.2
3,680,515	+				-2.4
3,680,516	-				-0.4
3,680,516	-				+0.7
3,680,516	-				+0.3
3,680,516	-				+0.1
3,680,516	-				+4.9
3,680,526	+				-0.6
3,680,527	-				-0.1
3,680,527	-				+1.0
3,680,527	-				-2.3
3,680,527	-				+1.9
3,680,535	-				+1.5
3,680,619	+		IAI47_17380	0.26	+0.6
3,680,619	+		IAI47_17380	0.26	-0.3
3,680,619	+		IAI47_17380	0.26	+0.1
3,680,620	-		IAI47_17380	0.26	-2.3
3,680,620	-		IAI47_17380	0.26	+2.6
3,680,620	-		IAI47_17380	0.26	+0.2
3,680,620	-		IAI47_17380	0.26	+0.1
3,680,668	+		IAI47_17380	0.46	-0.1
3,680,668	+		IAI47_17380	0.46	-1.5
3,680,669	-		IAI47_17380	0.47	+0.8
3,680,700	+		IAI47_17380	0.60	-1.0
3,680,718	+		IAI47_17380	0.67	+0.4
3,680,718	+		IAI47_17380	0.67	+1.0
3,680,719	-		IAI47_17380	0.68	-1.8
3,680,726	+		IAI47_17380	0.71	+1.2
3,680,795	+				+0.4
3,680,795	+				-0.7
3,680,795	+				-0.2
3,680,809	+		IAI47_17385	0.29	-2.0
3,680,809	+		IAI47_17385	0.29	-0.8
3,680,809	+		IAI47_17385	0.29	+0.9
3,680,810	-		IAI47_17385	0.29	+0.2
3,680,810	-		IAI47_17385	0.29	-1.2
3,680,822	-		IAI47_17385	0.35	-0.4
3,680,822	-		IAI47_17385	0.35	+2.7
3,680,855	-		IAI47_17385	0.49	-2.0
3,680,959	+				+2.5
3,680,959	+				-1.3
3,680,960	-				+0.2
3,680,960	-				+0.3
3,680,960	-				-1.6
3,680,960	-				-0.6
3,680,960	-				-0.4
3,680,962	+				-0.1
3,680,962	+				-2.5
3,680,963	-				+0.7
3,680,963	-				-1.9
3,680,963	-				+2.3
3,680,966	+				+0.5
3,680,967	-				-1.7
3,680,967	-				+5.0
3,680,979	+				-1.4
3,680,979	+				-1.8
3,680,979	+				-0.7
3,680,979	+				-0.7
3,680,979	+				+0.3
3,680,979	+				+0.8
3,680,979	+				-0.2
3,680,979	+				+1.1
3,680,980	-				-0.6
3,680,980	-				+0.6
3,680,980	-				+2.9
3,680,980	-				-2.3
3,680,980	-				-0.3
3,680,980	-				+0.1
3,680,980	-				-0.4
3,680,980	-				-0.4
3,680,980	-				-1.5
3,680,987	+				-0.1
3,680,987	+				+0.8
3,680,987	+				-0.9
3,680,987	+				-0.6
3,680,987	+				-1.0
3,680,988	-				-2.4
3,681,104	+				+0.8
3,681,105	-				-0.8
3,681,197	+		IAI47_17390	0.11	+0.8
3,681,197	+		IAI47_17390	0.11	+1.1
3,681,198	-		IAI47_17390	0.11	+0.8
3,681,318	+		IAI47_17390	0.19	-0.0
3,681,318	+		IAI47_17390	0.19	-0.4
3,681,319	-		IAI47_17390	0.19	+0.5
3,681,319	-		IAI47_17390	0.19	-0.1
3,681,319	-		IAI47_17390	0.19	-0.3
3,681,319	-		IAI47_17390	0.19	+0.3
3,681,461	+		IAI47_17390	0.28	+0.6
3,681,461	+		IAI47_17390	0.28	+0.7
3,681,461	+		IAI47_17390	0.28	-0.1
3,681,461	+		IAI47_17390	0.28	-0.2
3,681,461	+		IAI47_17390	0.28	+1.3
3,681,461	+		IAI47_17390	0.28	+0.2
3,681,461	+		IAI47_17390	0.28	-0.3
3,681,461	+		IAI47_17390	0.28	+0.5
3,681,461	+		IAI47_17390	0.28	+1.7
3,681,461	+		IAI47_17390	0.28	-1.0
3,681,461	+		IAI47_17390	0.28	+1.3
3,681,461	+		IAI47_17390	0.28	+4.1
3,681,462	-		IAI47_17390	0.28	-0.1
3,681,462	-		IAI47_17390	0.28	-0.1
3,681,462	-		IAI47_17390	0.28	+4.0
3,681,462	-		IAI47_17390	0.28	+2.0
3,681,462	-		IAI47_17390	0.28	-1.7
3,681,462	-		IAI47_17390	0.28	-0.3
3,681,462	-		IAI47_17390	0.28	-0.6
3,681,462	-		IAI47_17390	0.28	+0.5
3,681,462	-		IAI47_17390	0.28	+2.2
3,681,462	-		IAI47_17390	0.28	-0.5
3,681,462	-		IAI47_17390	0.28	+1.6
3,681,462	-		IAI47_17390	0.28	-0.4
3,681,462	-		IAI47_17390	0.28	+0.5
3,681,471	+		IAI47_17390	0.28	-0.4
3,681,471	+		IAI47_17390	0.28	-0.4
3,681,472	-		IAI47_17390	0.28	+0.6
3,681,483	+		IAI47_17390	0.29	-0.2
3,681,483	+		IAI47_17390	0.29	+0.7
3,681,484	-		IAI47_17390	0.29	-1.1
3,681,518	+		IAI47_17390	0.31	+1.0
3,681,518	+		IAI47_17390	0.31	-1.2
3,681,518	+		IAI47_17390	0.31	+1.2
3,681,519	-		IAI47_17390	0.31	+0.3
3,681,519	-		IAI47_17390	0.31	-1.3
3,681,527	+		IAI47_17390	0.32	+0.3
3,681,527	+		IAI47_17390	0.32	+1.1
3,681,528	-		IAI47_17390	0.32	+3.6
3,681,635	+		IAI47_17390	0.39	-0.3
3,681,635	+		IAI47_17390	0.39	+0.2
3,681,635	+		IAI47_17390	0.39	+0.9
3,681,637	+		IAI47_17390	0.39	-2.2
3,681,637	+		IAI47_17390	0.39	+0.0
3,681,637	+		IAI47_17390	0.39	+0.7
3,681,637	+		IAI47_17390	0.39	-0.3
3,681,637	+		IAI47_17390	0.39	-0.2
3,681,637	+		IAI47_17390	0.39	-0.1
3,681,637	+		IAI47_17390	0.39	+0.7
3,681,637	+		IAI47_17390	0.39	+1.4
3,681,637	+		IAI47_17390	0.39	-1.2
3,681,637	+		IAI47_17390	0.39	+1.2
3,681,637	+		IAI47_17390	0.39	-0.8
3,681,637	+		IAI47_17390	0.39	+0.4
3,681,637	+		IAI47_17390	0.39	-1.0
3,681,637	+		IAI47_17390	0.39	+2.1
3,681,637	+		IAI47_17390	0.39	+0.1
3,681,637	+		IAI47_17390	0.39	-1.3
3,681,638	-		IAI47_17390	0.39	-0.0
3,681,638	-		IAI47_17390	0.39	-0.2
3,681,638	-		IAI47_17390	0.39	-0.9
3,681,638	-		IAI47_17390	0.39	+0.3
3,681,638	-		IAI47_17390	0.39	-1.2
3,681,638	-		IAI47_17390	0.39	+5.5
3,681,638	-		IAI47_17390	0.39	-0.7
3,681,638	-		IAI47_17390	0.39	+1.9
3,681,638	-		IAI47_17390	0.39	+0.6
3,681,638	-		IAI47_17390	0.39	+1.3
3,681,638	-		IAI47_17390	0.39	-0.5
3,681,638	-		IAI47_17390	0.39	+5.2
3,681,638	-		IAI47_17390	0.39	-0.2
3,681,638	-		IAI47_17390	0.39	-0.1
3,681,638	-		IAI47_17390	0.39	-1.4
3,681,638	-		IAI47_17390	0.39	-0.2
3,681,702	+		IAI47_17390	0.43	+0.1
3,681,702	+		IAI47_17390	0.43	+1.0
3,681,727	+		IAI47_17390	0.44	-0.5
3,681,727	+		IAI47_17390	0.44	-2.1
3,681,728	-		IAI47_17390	0.44	+0.8
3,681,883	+		IAI47_17390	0.54	+0.5
3,681,884	-		IAI47_17390	0.54	+1.1
3,681,884	-		IAI47_17390	0.54	-0.9
3,681,884	-		IAI47_17390	0.54	+4.3
3,681,884	-		IAI47_17390	0.54	-0.6
3,681,932	+		IAI47_17390	0.57	+0.6
3,681,965	+		IAI47_17390	0.59	+0.1
3,681,965	+		IAI47_17390	0.59	+0.9
3,681,966	-		IAI47_17390	0.59	+4.5
3,681,988	-		IAI47_17390	0.61	+0.3
3,681,988	-		IAI47_17390	0.61	+0.1
3,681,988	-		IAI47_17390	0.61	+3.2
3,681,988	-		IAI47_17390	0.61	+0.3
3,681,992	+		IAI47_17390	0.61	+0.8
3,681,992	+		IAI47_17390	0.61	-1.2
3,681,992	+		IAI47_17390	0.61	+2.1
3,681,992	+		IAI47_17390	0.61	-1.0
3,681,993	-		IAI47_17390	0.61	-0.8
3,681,993	-		IAI47_17390	0.61	-0.6
3,681,993	-		IAI47_17390	0.61	+1.3
3,681,993	-		IAI47_17390	0.61	-0.7
3,681,993	-		IAI47_17390	0.61	-1.0
3,681,993	-		IAI47_17390	0.61	+0.8
3,681,993	-		IAI47_17390	0.61	-1.1
3,681,993	-		IAI47_17390	0.61	-0.2
3,681,993	-		IAI47_17390	0.61	-0.4
3,681,993	-		IAI47_17390	0.61	+0.8
3,681,995	+		IAI47_17390	0.61	-0.0
3,681,995	+		IAI47_17390	0.61	+2.0
3,681,995	+		IAI47_17390	0.61	-0.7
3,681,995	+		IAI47_17390	0.61	-1.5
3,681,996	-		IAI47_17390	0.61	+0.2
3,681,996	-		IAI47_17390	0.61	+0.9
3,681,996	-		IAI47_17390	0.61	-0.2
3,682,063	+		IAI47_17390	0.65	+5.0
3,682,063	+		IAI47_17390	0.65	-1.2
3,682,064	-		IAI47_17390	0.65	+1.1
3,682,064	-		IAI47_17390	0.65	+1.1
3,682,064	-		IAI47_17390	0.65	-1.3
3,682,064	-		IAI47_17390	0.65	-0.7
3,682,142	+		IAI47_17390	0.70	+0.5
3,682,143	-		IAI47_17390	0.70	-0.8
3,682,146	+		IAI47_17390	0.70	+1.3
3,682,146	+		IAI47_17390	0.70	+1.1
3,682,146	+		IAI47_17390	0.70	-0.4
3,682,146	+		IAI47_17390	0.70	+0.1
3,682,146	+		IAI47_17390	0.70	+0.8
3,682,146	+		IAI47_17390	0.70	-0.0
3,682,146	+		IAI47_17390	0.70	+2.1
3,682,146	+		IAI47_17390	0.70	-0.8
3,682,146	+		IAI47_17390	0.70	+1.6
3,682,147	-		IAI47_17390	0.70	+0.5
3,682,147	-		IAI47_17390	0.70	-1.0
3,682,147	-		IAI47_17390	0.70	-0.2
3,682,147	-		IAI47_17390	0.70	+1.0
3,682,147	-		IAI47_17390	0.70	+1.0
3,682,147	-		IAI47_17390	0.70	+5.5
3,682,147	-		IAI47_17390	0.70	-1.3
3,682,147	-		IAI47_17390	0.70	-1.1
3,682,162	-		IAI47_17390	0.71	+0.7
3,682,162	-		IAI47_17390	0.71	-2.6
3,682,348	+		IAI47_17390	0.83	-1.2
3,682,348	+		IAI47_17390	0.83	+1.5
3,682,348	+		IAI47_17390	0.83	+0.1
3,682,349	-		IAI47_17390	0.83	-0.7
3,682,349	-		IAI47_17390	0.83	+0.4
3,682,351	+		IAI47_17390	0.83	-2.1
3,682,351	+		IAI47_17390	0.83	+0.2
3,682,351	+		IAI47_17390	0.83	-0.7
3,682,352	-		IAI47_17390	0.83	-2.4
3,682,352	-		IAI47_17390	0.83	+1.3
3,682,352	-		IAI47_17390	0.83	+0.4
3,682,352	-		IAI47_17390	0.83	+0.2
3,682,352	-		IAI47_17390	0.83	-0.7
3,682,389	+		IAI47_17390	0.86	-1.1
3,682,390	-		IAI47_17390	0.86	+0.6
3,682,410	+		IAI47_17390	0.87	-1.5
3,682,410	+		IAI47_17390	0.87	-1.8
3,682,410	+		IAI47_17390	0.87	-0.4
3,682,410	+		IAI47_17390	0.87	+0.2
3,682,410	+		IAI47_17390	0.87	-1.1
3,682,410	+		IAI47_17390	0.87	+0.3
3,682,411	-		IAI47_17390	0.87	+0.6
3,682,411	-		IAI47_17390	0.87	+0.5
3,682,411	-		IAI47_17390	0.87	-2.8
3,682,411	-		IAI47_17390	0.87	+0.1
3,682,411	-		IAI47_17390	0.87	-1.1
3,682,411	-		IAI47_17390	0.87	-1.6
3,682,411	-		IAI47_17390	0.87	+2.5
3,682,439	+		IAI47_17390	0.89	-0.5
3,682,440	-		IAI47_17390	0.89	+0.5
3,682,440	-		IAI47_17390	0.89	+0.6
3,682,440	-		IAI47_17390	0.89	+0.6
3,682,477	+				-1.0
3,682,477	+				-0.3
3,682,477	+				+0.6
3,682,477	+				-0.1
3,682,477	+				-0.5
3,682,478	-				+0.1
3,682,478	-				+1.6
3,682,478	-				-0.9
3,682,478	-				+0.3
3,682,478	-				+0.8
3,682,478	-				-0.2
3,682,478	-				+0.1
3,682,478	-				+0.3
3,682,478	-				-1.7
3,682,478	-				+1.5
3,682,522	-				+1.0
3,682,522	-				-1.6
3,682,522	-				+0.1
3,682,522	-				-1.4
3,682,542	+				+1.7
3,682,543	-				+4.3
3,682,543	-				+0.8
3,682,649	-				-2.3
3,682,649	-				+0.1
3,682,649	-				-2.4
3,682,649	-				-0.7
3,682,649	-				-1.8
3,682,649	-				-1.8
3,682,651	+				-0.7
3,682,651	+				+0.5
3,682,651	+				+0.1
3,682,651	+				-0.8
3,682,651	+				-1.2
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3,682,652	-				+0.1
3,682,652	-				+0.8
3,682,652	-				-2.4
3,682,652	-				+1.5
3,682,652	-				+0.1
3,682,694	+				-1.0
3,682,694	+				-0.6
3,682,695	-				-1.2
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3,682,695	-				+0.4
3,682,780	+				-0.2
3,682,781	-				-0.9
3,682,861	+				-0.2
3,682,862	-				-0.5
3,682,862	-				-1.7
3,682,881	+				+0.1
3,682,881	+				+1.2
3,682,881	+				-0.7
3,682,882	-				+1.1
3,682,915	+				+0.7
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3,682,944	+				-1.8
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3,682,945	-				+1.6
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3,682,996	-		IAI47_17395	0.11	+0.8
3,682,996	-		IAI47_17395	0.11	+2.5
3,683,036	+		IAI47_17395	0.12	-0.1
3,683,036	+		IAI47_17395	0.12	-0.4
3,683,037	-		IAI47_17395	0.12	+1.5
3,683,037	-		IAI47_17395	0.12	+0.3
3,683,037	-		IAI47_17395	0.12	+1.6
3,683,074	+		IAI47_17395	0.13	+0.1
3,683,075	-		IAI47_17395	0.13	+0.4
3,683,122	+		IAI47_17395	0.15	-1.1
3,683,122	+		IAI47_17395	0.15	+1.9
3,683,122	+		IAI47_17395	0.15	-0.1
3,683,123	-		IAI47_17395	0.15	-0.3
3,683,149	+		IAI47_17395	0.15	+0.9
3,683,210	+		IAI47_17395	0.17	+0.7
3,683,210	+		IAI47_17395	0.17	-0.9
3,683,210	+		IAI47_17395	0.17	-0.2
3,683,210	+		IAI47_17395	0.17	+4.2
3,683,211	-		IAI47_17395	0.17	+0.3
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3,683,211	-		IAI47_17395	0.17	-0.6
3,683,211	-		IAI47_17395	0.17	+0.1
3,683,211	-		IAI47_17395	0.17	-1.8
3,683,245	+		IAI47_17395	0.18	-0.4
3,683,245	+		IAI47_17395	0.18	-0.0
3,683,245	+		IAI47_17395	0.18	-0.1
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3,683,264	+		IAI47_17395	0.19	+0.2
3,683,264	+		IAI47_17395	0.19	+0.0
3,683,264	+		IAI47_17395	0.19	-0.2
3,683,264	+		IAI47_17395	0.19	-2.3
3,683,264	+		IAI47_17395	0.19	-0.5
3,683,264	+		IAI47_17395	0.19	+0.2
3,683,265	-		IAI47_17395	0.19	+2.9
3,683,265	-		IAI47_17395	0.19	+0.3
3,683,265	-		IAI47_17395	0.19	+0.0
3,683,266	+		IAI47_17395	0.19	-2.7
3,683,266	+		IAI47_17395	0.19	-0.9
3,683,267	-		IAI47_17395	0.19	-0.2
3,683,267	-		IAI47_17395	0.19	-0.5
3,683,267	-		IAI47_17395	0.19	-0.3
3,683,302	+		IAI47_17395	0.20	-0.8
3,683,303	-		IAI47_17395	0.20	-2.1
3,683,328	+		IAI47_17395	0.21	-0.3
3,683,328	+		IAI47_17395	0.21	-0.1
3,683,329	-		IAI47_17395	0.21	-0.8
3,683,329	-		IAI47_17395	0.21	-0.3
3,683,443	+		IAI47_17395	0.24	+0.2
3,683,443	+		IAI47_17395	0.24	-0.0
3,683,444	-		IAI47_17395	0.24	-0.8
3,683,444	-		IAI47_17395	0.24	+1.2
3,683,444	-				+3.9
3,683,496	+		IAI47_17395	0.25	+0.1
3,683,496	+		IAI47_17395	0.25	+0.3
3,683,496	+		IAI47_17395	0.25	+3.1
3,683,496	+		IAI47_17395	0.25	-0.5
3,683,497	-		IAI47_17395	0.26	+2.1
3,683,497	-		IAI47_17395	0.26	+2.3
3,683,497	-		IAI47_17395	0.26	+0.5
3,683,497	-		IAI47_17395	0.26	+0.7
3,683,506	+		IAI47_17395	0.26	-0.2
3,683,506	+		IAI47_17395	0.26	+1.0
3,683,506	+		IAI47_17395	0.26	-0.9
3,683,507	-		IAI47_17395	0.26	-0.8
3,683,537	+		IAI47_17395	0.27	-0.1
3,683,538	-		IAI47_17395	0.27	-0.6