Strain Fitness in Pantoea sp. MT58 around IAI47_16920

Experiment: copper (II) chloride 2 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 uM, anaerobic
3,589,416	+				-0.4
3,589,416	+				+0.2
3,589,417	-				+1.1
3,589,423	+				-1.2
3,589,424	-				+0.7
3,589,460	+		IAI47_16915	0.10	+5.5
3,589,462	-		IAI47_16915	0.11	-0.2
3,589,487	+		IAI47_16915	0.13	-0.2
3,589,589	-		IAI47_16915	0.23	-1.2
3,589,774	+		IAI47_16915	0.42	-0.9
3,589,797	+		IAI47_16915	0.44	-0.9
3,589,798	-		IAI47_16915	0.44	-2.6
3,589,819	+		IAI47_16915	0.46	-0.3
3,589,819	+		IAI47_16915	0.46	+1.0
3,589,819	+		IAI47_16915	0.46	-0.7
3,589,819	+		IAI47_16915	0.46	+0.7
3,589,819	+		IAI47_16915	0.46	-0.9
3,589,819	+		IAI47_16915	0.46	+0.5
3,589,820	-		IAI47_16915	0.46	-0.6
3,589,888	+		IAI47_16915	0.53	+1.6
3,589,888	+		IAI47_16915	0.53	+5.9
3,589,889	-		IAI47_16915	0.53	-0.6
3,589,889	-		IAI47_16915	0.53	-1.1
3,589,897	+		IAI47_16915	0.54	-0.5
3,589,897	+		IAI47_16915	0.54	+1.9
3,589,897	+		IAI47_16915	0.54	+0.3
3,589,898	-		IAI47_16915	0.54	-0.8
3,589,898	-		IAI47_16915	0.54	-1.2
3,589,898	-		IAI47_16915	0.54	-1.0
3,589,946	+		IAI47_16915	0.59	-0.2
3,589,947	-		IAI47_16915	0.59	-0.2
3,589,949	+		IAI47_16915	0.59	-0.1
3,589,949	+		IAI47_16915	0.59	+0.6
3,589,949	+		IAI47_16915	0.59	+1.2
3,589,949	+		IAI47_16915	0.59	+3.4
3,589,949	+		IAI47_16915	0.59	-0.4
3,589,949	+		IAI47_16915	0.59	+0.3
3,589,950	-		IAI47_16915	0.59	+0.4
3,589,950	-		IAI47_16915	0.59	+0.7
3,589,950	-		IAI47_16915	0.59	-0.7
3,589,950	-		IAI47_16915	0.59	-1.5
3,589,950	-		IAI47_16915	0.59	-0.9
3,589,950	-		IAI47_16915	0.59	-0.8
3,589,950	-		IAI47_16915	0.59	-0.2
3,589,950	-		IAI47_16915	0.59	+1.3
3,589,950	-		IAI47_16915	0.59	-2.0
3,590,192	+		IAI47_16915	0.84	+0.6
3,590,192	+		IAI47_16915	0.84	-1.8
3,590,193	-		IAI47_16915	0.84	-0.5
3,590,193	-		IAI47_16915	0.84	-0.1
3,590,193	-		IAI47_16915	0.84	-1.8
3,590,193	-		IAI47_16915	0.84	+1.5
3,590,393	+				+0.5
3,590,393	+				+0.1
3,590,528	+				-0.8
3,590,528	+				+0.8
3,590,528	+				-1.5
3,590,528	+				-0.1
3,590,528	+				-0.2
3,590,528	+				-0.1
3,590,528	+				+3.9
3,590,528	+				-1.7
3,590,529	-				+1.1
3,590,529	-				+0.2
3,590,529	-				-0.5
3,590,629	+				-1.7
3,590,629	+				+0.4
3,590,695	-		IAI47_16920	0.13	+1.1
3,590,697	+		IAI47_16920	0.13	-0.6
3,590,697	+		IAI47_16920	0.13	-0.1
3,590,698	-		IAI47_16920	0.13	-0.5
3,590,698	-		IAI47_16920	0.13	-0.6
3,590,710	+		IAI47_16920	0.13	-0.5
3,590,782	+		IAI47_16920	0.16	+0.0
3,590,795	+		IAI47_16920	0.17	-0.7
3,590,795	+		IAI47_16920	0.17	+0.3
3,590,796	-		IAI47_16920	0.17	-1.8
3,590,801	+		IAI47_16920	0.17	+0.3
3,590,801	+		IAI47_16920	0.17	+0.8
3,590,801	+		IAI47_16920	0.17	+0.5
3,590,801	+		IAI47_16920	0.17	+2.0
3,590,802	-		IAI47_16920	0.17	-0.2
3,590,837	+		IAI47_16920	0.19	-0.3
3,590,837	+		IAI47_16920	0.19	-0.5
3,590,837	+		IAI47_16920	0.19	+0.3
3,590,837	+		IAI47_16920	0.19	+1.5
3,590,838	-		IAI47_16920	0.19	-0.6
3,590,838	-		IAI47_16920	0.19	-0.8
3,590,838	-		IAI47_16920	0.19	-0.4
3,590,838	-		IAI47_16920	0.19	+0.6
3,590,838	-		IAI47_16920	0.19	-1.5
3,590,838	-		IAI47_16920	0.19	-1.2
3,590,838	-		IAI47_16920	0.19	+1.6
3,590,838	-		IAI47_16920	0.19	-1.8
3,590,840	+		IAI47_16920	0.19	-1.6
3,590,840	+		IAI47_16920	0.19	+0.3
3,590,840	+		IAI47_16920	0.19	-1.5
3,590,840	+		IAI47_16920	0.19	+0.5
3,590,841	-		IAI47_16920	0.19	-0.3
3,590,869	+		IAI47_16920	0.20	+1.0
3,590,870	-		IAI47_16920	0.20	-0.2
3,590,886	+		IAI47_16920	0.21	-0.8
3,590,887	-		IAI47_16920	0.21	+2.4
3,590,953	+		IAI47_16920	0.24	-1.2
3,590,953	+		IAI47_16920	0.24	-0.7
3,590,954	-		IAI47_16920	0.24	-0.7
3,590,954	-		IAI47_16920	0.24	+0.3
3,590,990	+		IAI47_16920	0.25	-1.6
3,590,990	+		IAI47_16920	0.25	+0.7
3,590,990	+		IAI47_16920	0.25	-0.5
3,590,990	+		IAI47_16920	0.25	+1.9
3,591,070	-		IAI47_16920	0.29	+2.6
3,591,075	+		IAI47_16920	0.29	+2.2
3,591,075	+		IAI47_16920	0.29	-0.1
3,591,075	+		IAI47_16920	0.29	-0.1
3,591,075	+		IAI47_16920	0.29	-0.3
3,591,075	+		IAI47_16920	0.29	+1.7
3,591,075	+		IAI47_16920	0.29	-1.0
3,591,075	+		IAI47_16920	0.29	-0.2
3,591,076	-		IAI47_16920	0.29	-1.0
3,591,076	-		IAI47_16920	0.29	-0.1
3,591,076	-		IAI47_16920	0.29	+0.1
3,591,076	-		IAI47_16920	0.29	+0.5
3,591,076	-		IAI47_16920	0.29	+0.9
3,591,076	-		IAI47_16920	0.29	-0.9
3,591,209	+		IAI47_16920	0.34	+0.3
3,591,223	+		IAI47_16920	0.35	+0.0
3,591,233	+		IAI47_16920	0.35	-0.2
3,591,233	+		IAI47_16920	0.35	-0.9
3,591,233	+		IAI47_16920	0.35	-0.6
3,591,234	-		IAI47_16920	0.35	-0.3
3,591,234	-		IAI47_16920	0.35	-0.7
3,591,234	-		IAI47_16920	0.35	+0.8
3,591,234	-		IAI47_16920	0.35	+0.9
3,591,234	-		IAI47_16920	0.35	-1.1
3,591,408	+		IAI47_16920	0.43	+1.1
3,591,408	+		IAI47_16920	0.43	-0.9
3,591,409	-		IAI47_16920	0.43	+0.2
3,591,409	-		IAI47_16920	0.43	-0.4
3,591,536	+		IAI47_16920	0.48	+0.1
3,591,536	+		IAI47_16920	0.48	-1.3
3,591,536	+		IAI47_16920	0.48	+0.3
3,591,536	+		IAI47_16920	0.48	-0.2
3,591,536	+		IAI47_16920	0.48	+0.4
3,591,537	-		IAI47_16920	0.48	+0.1
3,591,537	-		IAI47_16920	0.48	+1.0
3,591,563	+		IAI47_16920	0.49	-0.4
3,591,564	-		IAI47_16920	0.49	+0.1
3,591,564	-		IAI47_16920	0.49	+1.3
3,591,564	-		IAI47_16920	0.49	-1.9
3,591,618	+		IAI47_16920	0.52	-1.1
3,591,740	+		IAI47_16920	0.57	+0.2
3,591,740	+		IAI47_16920	0.57	+1.0
3,591,741	-		IAI47_16920	0.57	-2.0
3,591,741	-		IAI47_16920	0.57	+0.2
3,591,905	+		IAI47_16920	0.64	-0.7
3,591,905	+		IAI47_16920	0.64	-0.8
3,591,906	-		IAI47_16920	0.64	+1.0
3,591,906	-		IAI47_16920	0.64	+1.6
3,591,906	-		IAI47_16920	0.64	-0.9
3,591,986	-		IAI47_16920	0.67	-0.5
3,591,986	-		IAI47_16920	0.67	-0.3
3,592,032	+		IAI47_16920	0.69	-0.4
3,592,073	+		IAI47_16920	0.71	-0.4
3,592,073	+		IAI47_16920	0.71	-1.2
3,592,073	+		IAI47_16920	0.71	-0.3
3,592,073	+		IAI47_16920	0.71	-0.6
3,592,074	-		IAI47_16920	0.71	-1.9
3,592,074	-		IAI47_16920	0.71	-0.3
3,592,106	+		IAI47_16920	0.72	+0.3
3,592,106	+		IAI47_16920	0.72	-0.1
3,592,106	+		IAI47_16920	0.72	-0.2
3,592,106	+		IAI47_16920	0.72	+0.9
3,592,106	+		IAI47_16920	0.72	+0.3
3,592,106	+		IAI47_16920	0.72	+0.3
3,592,106	+		IAI47_16920	0.72	-0.1
3,592,106	+		IAI47_16920	0.72	+0.4
3,592,106	+		IAI47_16920	0.72	+0.7
3,592,106	+		IAI47_16920	0.72	+0.4
3,592,106	+		IAI47_16920	0.72	+1.0
3,592,106	+		IAI47_16920	0.72	+3.7
3,592,107	-		IAI47_16920	0.72	-2.8
3,592,107	-		IAI47_16920	0.72	-1.3
3,592,107	-		IAI47_16920	0.72	-1.1
3,592,107	-		IAI47_16920	0.72	-0.7
3,592,107	-		IAI47_16920	0.72	-0.3
3,592,107	-		IAI47_16920	0.72	-0.5
3,592,109	+		IAI47_16920	0.72	+1.3
3,592,109	+		IAI47_16920	0.72	-1.0
3,592,109	+		IAI47_16920	0.72	-1.4
3,592,109	+		IAI47_16920	0.72	-1.4
3,592,109	+		IAI47_16920	0.72	-0.0
3,592,109	+		IAI47_16920	0.72	+1.0
3,592,109	+		IAI47_16920	0.72	-2.0
3,592,109	+		IAI47_16920	0.72	-1.6
3,592,109	+		IAI47_16920	0.72	+0.5
3,592,110	-		IAI47_16920	0.72	-0.7
3,592,110	-		IAI47_16920	0.72	-1.2
3,592,110	-		IAI47_16920	0.72	+0.3
3,592,110	-		IAI47_16920	0.72	-1.7
3,592,110	-		IAI47_16920	0.72	+0.0
3,592,110	-		IAI47_16920	0.72	+0.0
3,592,110	-		IAI47_16920	0.72	-0.8
3,592,239	+		IAI47_16920	0.78	+1.0
3,592,239	+		IAI47_16920	0.78	+1.9
3,592,239	+		IAI47_16920	0.78	+0.1
3,592,239	+		IAI47_16920	0.78	-0.4
3,592,239	+		IAI47_16920	0.78	-0.2
3,592,239	+		IAI47_16920	0.78	+3.3
3,592,239	+		IAI47_16920	0.78	-0.9
3,592,239	+		IAI47_16920	0.78	+0.1
3,592,239	+		IAI47_16920	0.78	+1.0
3,592,239	+		IAI47_16920	0.78	-0.5
3,592,239	+		IAI47_16920	0.78	-0.4
3,592,239	+		IAI47_16920	0.78	-0.3
3,592,239	+		IAI47_16920	0.78	+0.3
3,592,240	-		IAI47_16920	0.78	-0.6
3,592,240	-		IAI47_16920	0.78	-0.3
3,592,240	-		IAI47_16920	0.78	+0.5
3,592,240	-		IAI47_16920	0.78	-0.7
3,592,240	-		IAI47_16920	0.78	-0.5
3,592,240	-		IAI47_16920	0.78	-1.1
3,592,240	-		IAI47_16920	0.78	-0.6
3,592,249	+		IAI47_16920	0.78	-1.0
3,592,250	-		IAI47_16920	0.78	+5.0
3,592,250	-		IAI47_16920	0.78	+0.0
3,592,250	-		IAI47_16920	0.78	-0.1
3,592,257	+		IAI47_16920	0.79	+0.4
3,592,257	+		IAI47_16920	0.79	-1.2
3,592,325	+		IAI47_16920	0.81	+0.3
3,592,325	+		IAI47_16920	0.81	+0.1
3,592,325	+		IAI47_16920	0.81	-0.2
3,592,326	-		IAI47_16920	0.82	+0.1
3,592,326	-		IAI47_16920	0.82	+1.1
3,592,326	-		IAI47_16920	0.82	-0.6
3,592,380	+		IAI47_16920	0.84	-0.4
3,592,415	-		IAI47_16920	0.85	+0.9
3,592,448	+		IAI47_16920	0.87	-0.1
3,592,448	+		IAI47_16920	0.87	+1.1
3,592,448	+		IAI47_16920	0.87	-1.9
3,592,448	+		IAI47_16920	0.87	+2.9
3,592,449	-		IAI47_16920	0.87	-1.8
3,592,449	-		IAI47_16920	0.87	+1.5
3,592,449	-		IAI47_16920	0.87	-1.0
3,592,503	+		IAI47_16920	0.89	+2.5
3,592,503	+		IAI47_16920	0.89	+0.3
3,592,503	+		IAI47_16920	0.89	+0.2
3,592,504	-		IAI47_16920	0.89	-0.4
3,592,504	-		IAI47_16920	0.89	+2.0
3,592,504	-		IAI47_16920	0.89	+0.9
3,592,504	-		IAI47_16920	0.89	+0.9
3,592,504	-		IAI47_16920	0.89	-0.4
3,592,507	+		IAI47_16920	0.89	-0.7
3,592,507	+		IAI47_16920	0.89	-0.5
3,592,507	+		IAI47_16920	0.89	-0.3
3,592,507	+		IAI47_16920	0.89	-2.3
3,592,507	+		IAI47_16920	0.89	-2.0
3,592,507	+		IAI47_16920	0.89	+0.4
3,592,507	+		IAI47_16920	0.89	-0.1
3,592,507	+		IAI47_16920	0.89	-0.1
3,592,507	+		IAI47_16920	0.89	-0.9
3,592,507	+		IAI47_16920	0.89	+0.7
3,592,507	+		IAI47_16920	0.89	-0.3
3,592,507	+		IAI47_16920	0.89	+0.1
3,592,507	+		IAI47_16920	0.89	-0.7
3,592,507	+		IAI47_16920	0.89	-0.3
3,592,507	+		IAI47_16920	0.89	-0.1
3,592,507	+		IAI47_16920	0.89	+1.1
3,592,507	+		IAI47_16920	0.89	-0.1
3,592,507	+		IAI47_16920	0.89	+0.3
3,592,507	+		IAI47_16920	0.89	-0.8
3,592,507	+		IAI47_16920	0.89	+1.3
3,592,508	-		IAI47_16920	0.89	-0.7
3,592,508	-		IAI47_16920	0.89	-0.5
3,592,508	-		IAI47_16920	0.89	-0.1
3,592,508	-		IAI47_16920	0.89	-1.6
3,592,508	-		IAI47_16920	0.89	+1.0
3,592,508	-		IAI47_16920	0.89	+2.1
3,592,508	-		IAI47_16920	0.89	-0.7
3,592,508	-		IAI47_16920	0.89	-0.1
3,592,508	-		IAI47_16920	0.89	-0.8
3,592,508	-		IAI47_16920	0.89	-0.1
3,592,508	-		IAI47_16920	0.89	+0.7
3,592,508	-		IAI47_16920	0.89	+0.9
3,592,508	-		IAI47_16920	0.89	+0.2
3,592,508	-		IAI47_16920	0.89	+0.1
3,592,508	-		IAI47_16920	0.89	-0.4
3,592,509	+		IAI47_16920	0.89	+0.6
3,592,509	+		IAI47_16920	0.89	-0.3
3,592,509	+		IAI47_16920	0.89	+0.1
3,592,510	-				+3.9
3,592,510	-		IAI47_16920	0.89	+0.1
3,592,644	+				-0.3
3,592,644	+				+0.4
3,592,645	-				+1.5
3,592,645	-				-0.5
3,592,794	+				-0.2
3,592,814	+				-0.2
3,592,814	+				-0.5
3,592,814	+				+1.6
3,592,815	-				+0.3
3,592,834	-				-0.7
3,592,834	-				+3.8
3,592,842	+				-0.8
3,592,843	-				+0.5
3,592,878	+				-0.8
3,592,879	-				-0.5
3,592,942	-				+0.4
3,592,958	+				-2.8
3,592,958	+				-1.9
3,592,958	+				-2.3
3,592,958	+				+0.3
3,592,958	+				-0.9
3,592,958	+				-0.4
3,592,958	+				-0.0
3,592,958	+				+2.6
3,592,958	+				-0.4
3,592,959	-				-0.2
3,592,959	-				-0.3
3,592,959	-				-0.7
3,592,964	+				-1.4
3,592,964	+				-1.0
3,592,964	+				-0.7
3,592,964	+				+0.5
3,592,964	+				+0.3
3,592,964	+				-0.4
3,592,964	+				-0.1
3,592,964	+				-2.1
3,592,965	-				+1.4
3,592,965	-				+1.0
3,592,965	-				-0.7
3,592,965	-				-1.2
3,592,971	+				+2.8
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3,592,972	-				+2.6
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3,592,990	-				-0.1
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3,592,990	-				+0.6
3,592,990	-				-0.1
3,592,990	-				-0.4
3,592,991	+				-1.7
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3,592,991	+				-1.7
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3,592,991	+				+0.1
3,592,991	+				-2.6
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3,592,992	-				-0.0
3,592,992	-				+1.7
3,592,992	-				+0.1
3,592,992	-				-1.1
3,592,992	-				-0.8
3,592,992	-				+1.5
3,592,992	-				+1.3
3,592,992	-				-0.4
3,592,992	-				+0.5
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3,593,263	-		IAI47_16925	0.12	-0.2
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3,593,494	-		IAI47_16925	0.22	-0.7
3,593,494	-		IAI47_16925	0.22	-0.6
3,593,508	+		IAI47_16925	0.23	-1.9
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3,593,559	-		IAI47_16925	0.26	-0.8
3,593,559	-		IAI47_16925	0.26	-0.8
3,593,606	+		IAI47_16925	0.28	+2.0
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3,593,687	-		IAI47_16925	0.32	+0.4
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3,593,730	+		IAI47_16925	0.34	-0.8
3,593,730	+		IAI47_16925	0.34	-1.0
3,593,731	-		IAI47_16925	0.34	-1.8
3,593,731	-		IAI47_16925	0.34	+0.4
3,593,731	-		IAI47_16925	0.34	+0.8
3,593,731	-		IAI47_16925	0.34	+0.8
3,593,731	-		IAI47_16925	0.34	-1.6
3,593,731	-		IAI47_16925	0.34	-2.0
3,593,731	-		IAI47_16925	0.34	-1.2
3,593,731	-		IAI47_16925	0.34	-0.7
3,593,731	-		IAI47_16925	0.34	-1.0
3,593,731	-		IAI47_16925	0.34	+1.1
3,593,733	-		IAI47_16925	0.34	+1.4