Strain Fitness in Pantoea sp. MT58 around IAI47_13595

Experiment: copper (II) chloride 2 uM, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2 uM, anaerobic
2,882,152	+		IAI47_13590	0.18	-0.1
2,882,153	-		IAI47_13590	0.18	+1.5
2,882,153	-		IAI47_13590	0.18	-1.1
2,882,224	+		IAI47_13590	0.25	-1.1
2,882,224	+		IAI47_13590	0.25	-0.1
2,882,224	+		IAI47_13590	0.25	+1.2
2,882,224	+		IAI47_13590	0.25	-1.5
2,882,224	+		IAI47_13590	0.25	+0.7
2,882,224	+		IAI47_13590	0.25	+0.9
2,882,224	+		IAI47_13590	0.25	+0.9
2,882,224	+		IAI47_13590	0.25	-1.4
2,882,224	+		IAI47_13590	0.25	-1.0
2,882,224	+		IAI47_13590	0.25	-0.9
2,882,225	-		IAI47_13590	0.25	+1.4
2,882,225	-		IAI47_13590	0.25	-0.7
2,882,225	-		IAI47_13590	0.25	+0.2
2,882,225	-		IAI47_13590	0.25	-0.6
2,882,225	-		IAI47_13590	0.25	-0.9
2,882,225	-		IAI47_13590	0.25	-0.6
2,882,225	-		IAI47_13590	0.25	+0.0
2,882,225	-		IAI47_13590	0.25	-0.1
2,882,225	-		IAI47_13590	0.25	-2.8
2,882,225	-		IAI47_13590	0.25	-0.0
2,882,225	-		IAI47_13590	0.25	+0.2
2,882,225	-		IAI47_13590	0.25	-0.7
2,882,374	+		IAI47_13590	0.38	+0.2
2,882,374	+		IAI47_13590	0.38	+0.2
2,882,374	+		IAI47_13590	0.38	+0.4
2,882,375	-		IAI47_13590	0.38	+1.0
2,882,375	-		IAI47_13590	0.38	-0.1
2,882,375	-		IAI47_13590	0.38	+1.6
2,882,375	-		IAI47_13590	0.38	+0.6
2,882,375	-		IAI47_13590	0.38	-1.3
2,882,376	+		IAI47_13590	0.38	-1.7
2,882,376	+		IAI47_13590	0.38	-1.3
2,882,376	+		IAI47_13590	0.38	+1.4
2,882,377	-		IAI47_13590	0.38	-0.4
2,882,499	+		IAI47_13590	0.48	+1.1
2,882,499	+		IAI47_13590	0.48	-1.2
2,882,499	+		IAI47_13590	0.48	+0.1
2,882,499	+		IAI47_13590	0.48	-0.7
2,882,499	+		IAI47_13590	0.48	-1.2
2,882,500	-		IAI47_13590	0.49	+0.5
2,882,500	-		IAI47_13590	0.49	-0.5
2,882,500	-		IAI47_13590	0.49	+1.2
2,882,500	-		IAI47_13590	0.49	+0.8
2,882,500	-		IAI47_13590	0.49	-0.2
2,882,553	+		IAI47_13590	0.53	-0.3
2,882,553	+		IAI47_13590	0.53	+1.2
2,882,608	+		IAI47_13590	0.58	-0.0
2,882,609	-		IAI47_13590	0.58	-1.0
2,882,609	-		IAI47_13590	0.58	-1.4
2,882,609	-		IAI47_13590	0.58	-0.4
2,882,655	+		IAI47_13590	0.62	+0.4
2,882,655	+		IAI47_13590	0.62	-0.2
2,882,763	+		IAI47_13590	0.71	-0.3
2,882,880	+		IAI47_13590	0.82	-1.0
2,882,881	-		IAI47_13590	0.82	+2.2
2,882,932	-		IAI47_13590	0.86	-1.1
2,882,932	-		IAI47_13590	0.86	-0.2
2,882,932	-		IAI47_13590	0.86	-1.3
2,882,998	-				-1.4
2,883,019	+				+1.5
2,883,019	+				+0.2
2,883,019	+				+1.2
2,883,019	+				+1.5
2,883,019	+				-0.4
2,883,020	-				+3.4
2,883,020	-				+1.0
2,883,020	-				-0.0
2,883,052	+				+1.4
2,883,052	+				+1.0
2,883,052	+				+0.0
2,883,052	+				+2.6
2,883,052	+				+0.2
2,883,052	+				+2.1
2,883,052	+				-0.6
2,883,052	+				+0.4
2,883,052	+				+0.4
2,883,053	-				-0.9
2,883,053	-				+1.0
2,883,053	-				+1.8
2,883,053	-				+0.0
2,883,053	-				-1.3
2,883,053	-				-0.9
2,883,053	-				+3.3
2,883,053	-				-0.5
2,883,053	-				+0.4
2,883,053	-				-0.3
2,883,053	-				-0.7
2,883,053	-				-1.9
2,883,053	-				+0.3
2,883,053	-				+0.7
2,883,053	-				+0.3
2,883,053	-				-1.7
2,883,053	-				+1.5
2,883,055	-				-2.2
2,883,060	+				-0.9
2,883,061	-				-1.7
2,883,061	-				-0.1
2,883,061	-				+0.2
2,883,173	+				-0.7
2,883,174	-				+5.1
2,883,174	-				+0.2
2,883,208	+		IAI47_13595	0.12	+6.0
2,883,267	+		IAI47_13595	0.18	-0.3
2,883,267	+		IAI47_13595	0.18	-0.1
2,883,285	+		IAI47_13595	0.19	-1.7
2,883,286	-		IAI47_13595	0.20	+0.8
2,883,310	-		IAI47_13595	0.22	+2.0
2,883,310	-		IAI47_13595	0.22	+0.1
2,883,310	-		IAI47_13595	0.22	-2.0
2,883,342	-		IAI47_13595	0.25	+0.9
2,883,348	-		IAI47_13595	0.26	+0.1
2,883,365	+		IAI47_13595	0.27	-0.7
2,883,376	+		IAI47_13595	0.28	-0.9
2,883,376	+		IAI47_13595	0.28	-1.6
2,883,377	-		IAI47_13595	0.28	-1.2
2,883,377	-		IAI47_13595	0.28	-0.1
2,883,377	-		IAI47_13595	0.28	-1.8
2,883,377	-		IAI47_13595	0.28	+0.5
2,883,377	-		IAI47_13595	0.28	+0.2
2,883,519	+		IAI47_13595	0.42	-0.2
2,883,520	-		IAI47_13595	0.42	-0.3
2,883,555	+		IAI47_13595	0.46	-1.4
2,883,555	+		IAI47_13595	0.46	+2.7
2,883,556	-		IAI47_13595	0.46	-2.3
2,883,556	-		IAI47_13595	0.46	-0.5
2,883,606	+		IAI47_13595	0.50	-1.2
2,883,606	+		IAI47_13595	0.50	-0.3
2,883,606	+		IAI47_13595	0.50	+0.7
2,883,606	+		IAI47_13595	0.50	+0.7
2,883,606	+		IAI47_13595	0.50	-0.1
2,883,606	+		IAI47_13595	0.50	+5.8
2,883,607	-		IAI47_13595	0.51	-0.7
2,883,607	-		IAI47_13595	0.51	+1.2
2,883,607	-		IAI47_13595	0.51	+0.2
2,883,611	+		IAI47_13595	0.51	+1.5
2,883,612	-		IAI47_13595	0.51	+1.2
2,883,652	+		IAI47_13595	0.55	-0.7
2,883,652	+		IAI47_13595	0.55	-0.3
2,883,652	+		IAI47_13595	0.55	-1.7
2,883,653	-		IAI47_13595	0.55	-0.4
2,883,653	-		IAI47_13595	0.55	+0.3
2,883,653	-		IAI47_13595	0.55	+0.1
2,883,672	+		IAI47_13595	0.57	-1.0
2,883,672	+		IAI47_13595	0.57	+0.8
2,883,672	+		IAI47_13595	0.57	-1.1
2,883,672	+		IAI47_13595	0.57	+0.1
2,883,672	+		IAI47_13595	0.57	-1.0
2,883,673	-		IAI47_13595	0.57	-0.8
2,883,673	-		IAI47_13595	0.57	+1.3
2,883,676	+		IAI47_13595	0.57	+2.3
2,883,676	+		IAI47_13595	0.57	+0.1
2,883,677	-		IAI47_13595	0.57	-0.9
2,883,713	-		IAI47_13595	0.61	+0.4
2,883,753	-		IAI47_13595	0.65	+1.2
2,883,753	-		IAI47_13595	0.65	-0.2
2,883,800	-		IAI47_13595	0.69	+3.1
2,883,807	+		IAI47_13595	0.70	+2.5
2,883,807	+		IAI47_13595	0.70	+0.3
2,883,808	-		IAI47_13595	0.70	-0.6
2,883,808	-		IAI47_13595	0.70	-0.1
2,883,902	+		IAI47_13595	0.79	+2.2
2,883,902	+		IAI47_13595	0.79	+2.5
2,883,903	-		IAI47_13595	0.79	-1.0
2,883,903	-		IAI47_13595	0.79	+1.0
2,883,903	-		IAI47_13595	0.79	+0.0
2,883,927	+		IAI47_13595	0.81	+0.6
2,883,927	+		IAI47_13595	0.81	+2.1
2,883,927	+		IAI47_13595	0.81	-0.2
2,883,927	+		IAI47_13595	0.81	-2.1
2,883,939	+		IAI47_13595	0.83	+2.7
2,883,939	+		IAI47_13595	0.83	+3.6
2,883,939	+		IAI47_13595	0.83	+0.0
2,883,939	+		IAI47_13595	0.83	-1.0
2,883,940	-		IAI47_13595	0.83	+2.7
2,883,940	-		IAI47_13595	0.83	+1.3
2,883,940	-		IAI47_13595	0.83	-0.7
2,883,940	-		IAI47_13595	0.83	+1.0
2,883,975	+		IAI47_13595	0.86	+0.6
2,883,975	+		IAI47_13595	0.86	+6.3
2,883,975	+		IAI47_13595	0.86	+1.5
2,883,975	+		IAI47_13595	0.86	+1.0
2,883,975	+		IAI47_13595	0.86	-1.9
2,883,975	+		IAI47_13595	0.86	+0.5
2,883,975	+		IAI47_13595	0.86	-1.4
2,883,975	+		IAI47_13595	0.86	+0.4
2,883,975	+		IAI47_13595	0.86	-0.4
2,883,975	+		IAI47_13595	0.86	-0.3
2,883,976	-		IAI47_13595	0.86	+0.7
2,883,976	-		IAI47_13595	0.86	+0.7
2,883,976	-		IAI47_13595	0.86	-1.1
2,883,976	-		IAI47_13595	0.86	+1.3
2,883,976	-		IAI47_13595	0.86	-1.2
2,883,976	-		IAI47_13595	0.86	-0.0
2,883,976	-		IAI47_13595	0.86	+1.8
2,883,977	+		IAI47_13595	0.86	-2.2
2,883,977	+		IAI47_13595	0.86	+0.6
2,883,977	+		IAI47_13595	0.86	+0.2
2,883,977	+		IAI47_13595	0.86	+0.5
2,883,978	-		IAI47_13595	0.86	-0.8
2,883,978	-		IAI47_13595	0.86	-1.1
2,883,978	-		IAI47_13595	0.86	+0.9
2,883,978	-		IAI47_13595	0.86	-0.0
2,884,160	-				-0.7
2,884,181	+				-0.8
2,884,186	+				+1.3
2,884,206	+				+0.0
2,885,020	+				+1.1
2,885,021	-				+1.5
2,885,070	+				-0.9
2,885,071	-				+0.1
2,885,071	-				+0.5