Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2574 and Ac3H11_2575 are separated by 12 nucleotides Ac3H11_2575 and Ac3H11_2576 are separated by 156 nucleotides
Ac3H11_2574 - Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51), at 851,924 to 852,979
_2574
Ac3H11_2575 - Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43), at 852,992 to 853,864
_2575
Ac3H11_2576 - 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) / Cytidylate kinase (EC 2.7.4.25), at 854,021 to 856,051
_2576
Position (kb) 852
853
854 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 852.242 kb on + strand, within Ac3H11_2574 at 852.242 kb on + strand, within Ac3H11_2574 at 852.242 kb on + strand, within Ac3H11_2574 at 852.296 kb on + strand, within Ac3H11_2574 at 852.296 kb on + strand, within Ac3H11_2574 at 852.656 kb on + strand, within Ac3H11_2574 at 852.656 kb on + strand, within Ac3H11_2574 at 852.656 kb on + strand, within Ac3H11_2574 at 852.656 kb on + strand, within Ac3H11_2574 at 852.656 kb on + strand, within Ac3H11_2574 at 852.656 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.857 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.860 kb on + strand, within Ac3H11_2574 at 852.866 kb on + strand, within Ac3H11_2574 at 852.866 kb on + strand, within Ac3H11_2574 at 852.866 kb on + strand, within Ac3H11_2574 at 852.866 kb on + strand, within Ac3H11_2574 at 852.944 kb on + strand at 852.962 kb on + strand at 852.962 kb on + strand at 853.088 kb on + strand, within Ac3H11_2575 at 853.088 kb on + strand, within Ac3H11_2575 at 853.088 kb on + strand, within Ac3H11_2575 at 853.275 kb on + strand, within Ac3H11_2575 at 853.275 kb on + strand, within Ac3H11_2575 at 853.406 kb on + strand, within Ac3H11_2575 at 853.406 kb on + strand, within Ac3H11_2575 at 853.862 kb on + strand at 853.862 kb on + strand at 854.024 kb on + strand at 854.024 kb on + strand at 854.024 kb on + strand at 854.034 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 852,242 + Ac3H11_2574 0.30 -2.9 852,242 + Ac3H11_2574 0.30 -2.0 852,242 + Ac3H11_2574 0.30 -2.7 852,296 + Ac3H11_2574 0.35 -1.9 852,296 + Ac3H11_2574 0.35 -5.1 852,656 + Ac3H11_2574 0.69 -4.3 852,656 + Ac3H11_2574 0.69 -3.9 852,656 + Ac3H11_2574 0.69 -3.9 852,656 + Ac3H11_2574 0.69 -4.1 852,656 + Ac3H11_2574 0.69 -3.7 852,656 + Ac3H11_2574 0.69 -3.3 852,857 + Ac3H11_2574 0.88 -2.2 852,857 + Ac3H11_2574 0.88 -3.3 852,857 + Ac3H11_2574 0.88 -0.9 852,857 + Ac3H11_2574 0.88 -2.5 852,857 + Ac3H11_2574 0.88 -1.9 852,857 + Ac3H11_2574 0.88 -4.4 852,857 + Ac3H11_2574 0.88 -4.0 852,857 + Ac3H11_2574 0.88 -3.2 852,857 + Ac3H11_2574 0.88 -3.6 852,857 + Ac3H11_2574 0.88 -4.5 852,860 + Ac3H11_2574 0.89 -3.9 852,860 + Ac3H11_2574 0.89 -3.3 852,860 + Ac3H11_2574 0.89 -3.1 852,860 + Ac3H11_2574 0.89 -4.2 852,860 + Ac3H11_2574 0.89 -1.8 852,860 + Ac3H11_2574 0.89 -3.8 852,860 + Ac3H11_2574 0.89 -3.9 852,860 + Ac3H11_2574 0.89 -3.4 852,860 + Ac3H11_2574 0.89 -3.3 852,860 + Ac3H11_2574 0.89 -4.1 852,866 + Ac3H11_2574 0.89 -1.2 852,866 + Ac3H11_2574 0.89 -3.0 852,866 + Ac3H11_2574 0.89 -4.3 852,866 + Ac3H11_2574 0.89 -0.6 852,944 + -3.5 852,962 + -5.0 852,962 + -3.7 853,088 + Ac3H11_2575 0.11 -1.8 853,088 + Ac3H11_2575 0.11 -1.9 853,088 + Ac3H11_2575 0.11 -1.4 853,275 + Ac3H11_2575 0.32 -1.0 853,275 + Ac3H11_2575 0.32 -4.3 853,406 + Ac3H11_2575 0.47 -2.6 853,406 + Ac3H11_2575 0.47 -3.9 853,862 + -1.0 853,862 + +0.6 854,024 + -3.6 854,024 + -1.8 854,024 + -1.9 854,034 + -4.4
Or see this region's nucleotide sequence