Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002065

Experiment: 4-Hydroxybenzoic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C)
2,314,341	+		ABIE53_002064	0.64	-1.1
2,314,480	+		ABIE53_002064	0.71	-1.1
2,314,480	+		ABIE53_002064	0.71	-0.9
2,314,480	+		ABIE53_002064	0.71	-1.1
2,314,480	+		ABIE53_002064	0.71	-0.7
2,314,481	-		ABIE53_002064	0.71	-1.5
2,314,481	-		ABIE53_002064	0.71	-3.2
2,314,481	-		ABIE53_002064	0.71	-1.7
2,314,481	-		ABIE53_002064	0.71	-2.5
2,314,481	-		ABIE53_002064	0.71	-2.7
2,314,481	-		ABIE53_002064	0.71	-1.1
2,314,481	-		ABIE53_002064	0.71	-3.4
2,314,481	-		ABIE53_002064	0.71	+0.1
2,314,495	+		ABIE53_002064	0.72	-0.3
2,314,496	-		ABIE53_002064	0.72	-3.0
2,314,496	-		ABIE53_002064	0.72	-1.9
2,314,496	-		ABIE53_002064	0.72	-2.9
2,314,496	-		ABIE53_002064	0.72	-2.0
2,314,496	-		ABIE53_002064	0.72	-2.0
2,314,534	+		ABIE53_002064	0.74	-0.3
2,314,535	-		ABIE53_002064	0.74	-2.3
2,314,535	-		ABIE53_002064	0.74	-2.6
2,314,573	+		ABIE53_002064	0.76	+0.5
2,314,573	+		ABIE53_002064	0.76	-1.9
2,314,573	+		ABIE53_002064	0.76	-1.7
2,314,573	+		ABIE53_002064	0.76	-1.1
2,314,573	+		ABIE53_002064	0.76	-0.9
2,314,573	+		ABIE53_002064	0.76	-0.3
2,314,573	+		ABIE53_002064	0.76	-1.7
2,314,573	+		ABIE53_002064	0.76	-0.5
2,314,573	+		ABIE53_002064	0.76	-1.3
2,314,573	+		ABIE53_002064	0.76	-2.4
2,314,573	+		ABIE53_002064	0.76	-0.9
2,314,574	-		ABIE53_002064	0.76	-2.7
2,314,574	-		ABIE53_002064	0.76	-1.5
2,314,574	-		ABIE53_002064	0.76	-1.9
2,314,574	-		ABIE53_002064	0.76	-2.1
2,314,574	-		ABIE53_002064	0.76	-1.5
2,314,574	-		ABIE53_002064	0.76	-1.3
2,314,574	-		ABIE53_002064	0.76	+0.1
2,314,574	-		ABIE53_002064	0.76	+0.7
2,314,574	-		ABIE53_002064	0.76	+0.1
2,314,582	+		ABIE53_002064	0.76	-0.9
2,314,582	+		ABIE53_002064	0.76	-2.1
2,314,583	-		ABIE53_002064	0.76	-2.0
2,314,583	-		ABIE53_002064	0.76	-4.9
2,314,583	-		ABIE53_002064	0.76	-1.1
2,314,583	-		ABIE53_002064	0.76	-2.8
2,314,593	+		ABIE53_002064	0.77	-1.5
2,314,593	+		ABIE53_002064	0.77	-2.4
2,314,593	+		ABIE53_002064	0.77	-0.1
2,314,594	+		ABIE53_002064	0.77	+0.7
2,314,594	-		ABIE53_002064	0.77	-1.5
2,314,594	-		ABIE53_002064	0.77	-2.4
2,314,594	-		ABIE53_002064	0.77	-2.4
2,314,594	-		ABIE53_002064	0.77	-1.7
2,314,594	-		ABIE53_002064	0.77	-2.2
2,314,594	-		ABIE53_002064	0.77	-2.2
2,314,594	-		ABIE53_002064	0.77	-1.7
2,314,594	-		ABIE53_002064	0.77	-2.0
2,314,594	-		ABIE53_002064	0.77	-1.3
2,314,594	-		ABIE53_002064	0.77	-0.3
2,314,594	-		ABIE53_002064	0.77	-0.3
2,314,594	-		ABIE53_002064	0.77	-0.3
2,314,597	+		ABIE53_002064	0.77	-1.9
2,314,597	+		ABIE53_002064	0.77	-2.7
2,314,597	+		ABIE53_002064	0.77	-1.9
2,314,597	+		ABIE53_002064	0.77	+0.1
2,314,597	+		ABIE53_002064	0.77	-2.7
2,314,597	+		ABIE53_002064	0.77	-0.9
2,314,597	+		ABIE53_002064	0.77	-1.1
2,314,597	+		ABIE53_002064	0.77	-2.7
2,314,598	-		ABIE53_002064	0.77	-0.3
2,314,598	-		ABIE53_002064	0.77	-3.1
2,314,598	-		ABIE53_002064	0.77	-2.2
2,314,598	-		ABIE53_002064	0.77	-1.7
2,314,688	-		ABIE53_002064	0.82	-2.3
2,314,688	-		ABIE53_002064	0.82	-0.7
2,314,688	-		ABIE53_002064	0.82	+0.8
2,314,688	-		ABIE53_002064	0.82	-2.0
2,314,688	-		ABIE53_002064	0.82	-2.7
2,314,688	-		ABIE53_002064	0.82	-0.3
2,314,688	-		ABIE53_002064	0.82	-1.7
2,314,707	+		ABIE53_002064	0.83	-2.3
2,314,707	+		ABIE53_002064	0.83	+0.3
2,314,708	-		ABIE53_002064	0.83	-2.0
2,314,708	-		ABIE53_002064	0.83	-2.7
2,314,708	-		ABIE53_002064	0.83	-1.1
2,314,708	-		ABIE53_002064	0.83	+0.1
2,314,708	-		ABIE53_002064	0.83	-2.7
2,314,708	-		ABIE53_002064	0.83	-1.5
2,314,729	+		ABIE53_002064	0.84	+0.1
2,314,730	-		ABIE53_002064	0.84	-1.1
2,314,730	-		ABIE53_002064	0.84	-3.9
2,314,730	-		ABIE53_002064	0.84	-1.7
2,314,789	-		ABIE53_002064	0.87	-0.7
2,315,027	-				+0.7
2,315,027	-				-1.1
2,315,044	+				+1.7
2,315,044	+				-0.1
2,315,044	+				+0.3
2,315,045	-				+0.7
2,315,092	+				+0.7
2,315,092	+				-0.9
2,315,092	+				-1.2
2,315,092	+				-0.3
2,315,092	+				-0.1
2,315,092	+				+1.4
2,315,093	-				-1.8
2,315,093	-				-2.6
2,315,093	-				-0.9
2,315,093	-				-1.5
2,315,093	-				-2.7
2,315,093	-				-0.7
2,315,093	-				-2.8
2,315,623	+		ABIE53_002065	0.38	-0.3
2,315,623	+		ABIE53_002065	0.38	-2.2
2,315,623	+		ABIE53_002065	0.38	-0.7
2,315,623	+		ABIE53_002065	0.38	-0.7
2,315,623	+		ABIE53_002065	0.38	-3.1
2,315,623	+		ABIE53_002065	0.38	+0.9
2,315,623	+		ABIE53_002065	0.38	-1.3
2,315,623	+		ABIE53_002065	0.38	-1.7
2,315,623	+		ABIE53_002065	0.38	-0.5
2,315,623	+		ABIE53_002065	0.38	-1.7
2,315,623	+		ABIE53_002065	0.38	-0.4
2,315,623	+		ABIE53_002065	0.38	-1.5
2,315,624	-		ABIE53_002065	0.38	-1.3
2,315,624	-		ABIE53_002065	0.38	-2.7
2,315,624	-		ABIE53_002065	0.38	-0.3
2,315,624	-		ABIE53_002065	0.38	+1.7
2,315,624	-		ABIE53_002065	0.38	-1.3
2,315,624	-		ABIE53_002065	0.38	-0.9
2,315,624	-		ABIE53_002065	0.38	-1.5
2,315,624	-		ABIE53_002065	0.38	-1.1
2,315,624	-		ABIE53_002065	0.38	-1.1
2,315,624	-		ABIE53_002065	0.38	-0.8
2,315,624	-		ABIE53_002065	0.38	-0.9
2,315,624	-		ABIE53_002065	0.38	-0.9
2,315,632	+		ABIE53_002065	0.39	-1.0
2,315,632	+		ABIE53_002065	0.39	-1.7
2,315,632	+		ABIE53_002065	0.39	+0.1
2,315,632	+		ABIE53_002065	0.39	-0.3
2,315,633	-		ABIE53_002065	0.39	-1.8
2,316,502	+				-0.7
2,316,502	+				-0.3
2,316,502	+				+1.7
2,316,503	-				-0.7
2,316,503	-				-2.7
2,316,556	+				+1.3
2,316,556	+				-0.9
2,316,556	+				+2.3
2,316,556	+				-1.5
2,316,556	+				+0.3
2,316,556	+				-0.9
2,316,556	+				-0.9
2,316,557	-				+0.1
2,316,557	-				+0.7
2,316,557	-				-3.8
2,316,557	-				-2.1
2,316,561	+				-0.9
2,316,561	+				-1.3
2,316,562	-				+0.1
2,316,562	-				-0.9
2,316,562	-				-2.9
2,316,580	+				-0.9
2,316,580	+				-3.9
2,316,580	+				-1.1
2,316,580	+				-1.3
2,316,581	-				-0.9
2,316,581	-				-2.1
2,316,581	-				+0.1
2,316,581	-				-1.1
2,316,581	-				-0.9
2,316,581	-				-3.0
2,316,584	+				-0.7
2,316,584	+				+1.7
2,316,584	+				-1.7
2,316,585	-				+0.7
2,316,585	-				-3.1
2,316,585	-				-3.4
2,316,585	-				-2.2
2,316,585	-				+1.7
2,316,644	-		ABIE53_002066	0.11	+1.1
2,316,644	-		ABIE53_002066	0.11	-1.3
2,316,972	+		ABIE53_002066	0.55	-1.3
2,316,972	+		ABIE53_002066	0.55	-0.3
2,316,972	+		ABIE53_002066	0.55	-0.9
2,316,972	+		ABIE53_002066	0.55	+0.1
2,316,972	+		ABIE53_002066	0.55	-3.2
2,316,972	+		ABIE53_002066	0.55	-0.3
2,316,972	+		ABIE53_002066	0.55	-0.2
2,316,972	+		ABIE53_002066	0.55	-1.8
2,316,973	-		ABIE53_002066	0.55	-0.3
2,316,973	-		ABIE53_002066	0.55	+0.7
2,317,018	+		ABIE53_002066	0.62	+0.1
2,317,018	+		ABIE53_002066	0.62	-0.3
2,317,018	+		ABIE53_002066	0.62	-0.3
2,317,018	+		ABIE53_002066	0.62	+0.7
2,317,018	+		ABIE53_002066	0.62	-1.4
2,317,018	+		ABIE53_002066	0.62	-0.1
2,317,018	+		ABIE53_002066	0.62	-3.6
2,317,018	+		ABIE53_002066	0.62	-1.7
2,317,018	+		ABIE53_002066	0.62	-0.9
2,317,019	-		ABIE53_002066	0.62	+0.1
2,317,114	+		ABIE53_002066	0.74	-1.5
2,317,114	+		ABIE53_002066	0.74	-4.0
2,317,114	+		ABIE53_002066	0.74	-1.2
2,317,115	-		ABIE53_002066	0.75	-2.3
2,317,115	-		ABIE53_002066	0.75	-2.7
2,317,115	-		ABIE53_002066	0.75	-1.8
2,317,293	+				-1.1
2,317,294	-				-0.9