Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3058

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
3,878,945	+		BT3057	0.53	-1.3
3,879,004	-		BT3057	0.56	-0.8
3,879,030	-		BT3057	0.58	-0.3
3,879,043	+		BT3057	0.59	+0.2
3,879,043	+		BT3057	0.59	-0.8
3,879,112	+		BT3057	0.64	-0.6
3,879,112	+		BT3057	0.64	+0.6
3,879,150	+		BT3057	0.66	+0.3
3,879,216	+		BT3057	0.70	-0.4
3,879,217	-		BT3057	0.70	-0.5
3,879,263	+		BT3057	0.73	-0.6
3,879,270	-		BT3057	0.74	-1.6
3,879,347	+		BT3057	0.79	-0.3
3,879,474	-		BT3057	0.87	-0.3
3,879,479	-		BT3057	0.88	+0.4
3,879,527	+				-1.0
3,879,548	+				-0.4
3,879,548	+				+0.3
3,879,549	-				-0.3
3,879,579	-				+0.1
3,879,579	-				+0.2
3,879,579	-				-0.8
3,879,579	-				+0.7
3,879,669	+				+1.0
3,879,670	-				+1.8
3,879,673	+				+0.1
3,879,687	+				+0.5
3,879,688	-				-0.5
3,879,688	-				+0.0
3,879,688	-				-0.3
3,879,689	+				-0.0
3,879,695	-				-0.3
3,879,715	+				-0.7
3,879,774	-				-0.7
3,879,793	+				+0.5
3,879,795	+				+0.7
3,879,798	+				-0.3
3,879,798	+				+0.3
3,879,806	+				+0.8
3,879,838	+				-1.0
3,879,839	-				+0.6
3,879,840	+				+0.7
3,879,854	+				+0.3
3,879,928	-				-2.0
3,879,997	+		BT3058	0.11	+0.2
3,880,003	+		BT3058	0.12	+0.4
3,880,008	+		BT3058	0.12	-0.5
3,880,008	+		BT3058	0.12	-0.5
3,880,009	-		BT3058	0.13	-0.1
3,880,052	+		BT3058	0.18	+0.1
3,880,062	-		BT3058	0.19	+0.1
3,880,101	+		BT3058	0.23	-0.4
3,880,102	-		BT3058	0.24	-0.9
3,880,107	-		BT3058	0.24	-0.4
3,880,136	+		BT3058	0.28	-0.6
3,880,136	+		BT3058	0.28	-1.6
3,880,137	-		BT3058	0.28	-3.2
3,880,137	-		BT3058	0.28	+0.0
3,880,137	-		BT3058	0.28	-0.2
3,880,137	-		BT3058	0.28	-0.4
3,880,138	+		BT3058	0.28	-1.1
3,880,182	-		BT3058	0.33	-0.3
3,880,184	-		BT3058	0.33	+0.6
3,880,219	+		BT3058	0.37	+1.7
3,880,219	+		BT3058	0.37	-0.4
3,880,255	+		BT3058	0.42	-0.2
3,880,271	-		BT3058	0.44	-0.1
3,880,278	+		BT3058	0.44	-0.2
3,880,278	+		BT3058	0.44	+0.1
3,880,328	+		BT3058	0.50	-0.6
3,880,384	-		BT3058	0.57	-0.9
3,880,389	+		BT3058	0.58	-0.6
3,880,389	+		BT3058	0.58	-0.8
3,880,427	+		BT3058	0.62	-1.1
3,880,427	+		BT3058	0.62	-2.7
3,880,430	+		BT3058	0.63	+0.4
3,880,431	-		BT3058	0.63	+0.1
3,880,456	-		BT3058	0.66	-0.2
3,880,477	+		BT3058	0.68	-0.4
3,880,481	-		BT3058	0.69	+0.4
3,880,481	-		BT3058	0.69	-0.6
3,880,481	-		BT3058	0.69	-0.0
3,880,484	+		BT3058	0.69	-0.3
3,880,484	+		BT3058	0.69	-2.1
3,880,485	-		BT3058	0.69	-1.4
3,880,541	+		BT3058	0.76	-1.4
3,880,593	+		BT3058	0.82	-1.3
3,880,593	+		BT3058	0.82	+0.2
3,880,593	+		BT3058	0.82	-2.1
3,880,594	-		BT3058	0.82	-0.4
3,880,594	-		BT3058	0.82	-2.0
3,880,594	-		BT3058	0.82	+0.6
3,880,606	-		BT3058	0.83	+0.3
3,880,606	-		BT3058	0.83	+0.1
3,880,670	+				-0.3
3,880,682	+				+0.7
3,880,683	-				-0.1
3,880,683	-				-0.3
3,880,693	-				-0.8
3,880,724	+				-0.7
3,880,725	-				-0.0
3,880,736	+				-0.4
3,880,745	+				-0.4
3,880,746	-				-0.7
3,880,746	-				-1.7
3,880,746	-				-0.5
3,880,746	-				-0.9
3,880,747	+				-1.4
3,880,747	+				-0.1
3,880,748	-				-0.3
3,880,790	+				-0.4
3,880,804	+				+1.5
3,880,806	+				-0.4
3,880,854	+				+0.4
3,880,854	+				-1.4
3,880,854	+				+1.2
3,880,905	-				+1.1
3,880,915	-				-0.6
3,880,934	+				-0.3
3,880,935	-				-1.5
3,880,935	-				-0.1
3,880,937	+				+0.0
3,881,010	+				+0.1
3,881,010	+				+1.5
3,881,011	-				+0.4
3,881,042	+		BT3059	0.10	-0.3
3,881,042	+		BT3059	0.10	+0.1
3,881,113	-		BT3059	0.17	+0.2
3,881,114	+		BT3059	0.17	-0.8
3,881,115	-		BT3059	0.18	-0.2
3,881,116	+				+0.6
3,881,117	-		BT3059	0.18	-0.1
3,881,120	+		BT3059	0.18	-0.6
3,881,121	-		BT3059	0.18	+0.1
3,881,141	-		BT3059	0.20	-0.1
3,881,144	+		BT3059	0.21	-0.6
3,881,151	+		BT3059	0.21	-0.9
3,881,152	-		BT3059	0.21	-0.5
3,881,165	+				-0.4
3,881,236	-		BT3059	0.30	+0.3
3,881,242	+		BT3059	0.31	-1.6
3,881,243	-		BT3059	0.31	-0.6
3,881,243	-		BT3059	0.31	+1.1
3,881,243	-		BT3059	0.31	-0.1
3,881,243	-		BT3059	0.31	+0.3
3,881,246	+		BT3059	0.31	+0.2
3,881,246	+		BT3059	0.31	+0.5
3,881,246	+		BT3059	0.31	+0.6
3,881,246	+		BT3059	0.31	+0.9
3,881,247	-		BT3059	0.31	+1.0
3,881,247	-		BT3059	0.31	+0.7
3,881,247	-		BT3059	0.31	-0.2
3,881,247	-		BT3059	0.31	+0.3
3,881,247	-		BT3059	0.31	-1.7
3,881,247	-		BT3059	0.31	-0.8
3,881,248	+		BT3059	0.31	-1.1
3,881,248	+		BT3059	0.31	-0.5
3,881,248	+		BT3059	0.31	+0.7
3,881,298	-		BT3059	0.36	-2.1
3,881,299	+		BT3059	0.36	-1.1
3,881,321	+		BT3059	0.39	+0.8
3,881,331	+		BT3059	0.40	-1.1
3,881,331	+		BT3059	0.40	-1.4
3,881,337	-		BT3059	0.40	-0.5
3,881,345	+		BT3059	0.41	-1.1
3,881,366	+		BT3059	0.43	-1.3
3,881,368	+		BT3059	0.43	-0.7
3,881,369	-		BT3059	0.44	-0.0
3,881,369	-		BT3059	0.44	-0.7
3,881,399	+		BT3059	0.47	+0.6
3,881,450	+		BT3059	0.52	-1.2
3,881,491	-		BT3059	0.56	+0.1
3,881,525	+		BT3059	0.60	-0.3
3,881,525	+		BT3059	0.60	-0.7
3,881,532	-		BT3059	0.60	+0.0
3,881,553	-		BT3059	0.62	+0.1
3,881,570	+		BT3059	0.64	-0.3
3,881,570	+		BT3059	0.64	-0.3
3,881,571	-		BT3059	0.64	-1.2
3,881,572	+		BT3059	0.64	+1.2
3,881,573	-		BT3059	0.65	-0.1
3,881,576	+		BT3059	0.65	-0.2
3,881,577	-		BT3059	0.65	+1.2
3,881,623	-				+0.2
3,881,623	-		BT3059	0.70	+0.0
3,881,623	-		BT3059	0.70	+1.0
3,881,635	+		BT3059	0.71	-0.6
3,881,635	+		BT3059	0.71	+1.3
3,881,661	-		BT3059	0.74	-0.8
3,881,668	+		BT3059	0.74	-2.4
3,881,669	-		BT3059	0.74	-0.8
3,881,669	-		BT3059	0.74	-2.7
3,881,669	-		BT3059	0.74	+0.6
3,881,669	-		BT3059	0.74	-0.6
3,881,678	+		BT3059	0.75	+1.1
3,881,681	+		BT3059	0.76	+0.6
3,881,682	-		BT3059	0.76	+1.3
3,881,682	-		BT3059	0.76	-0.3
3,881,718	-		BT3059	0.79	-0.9
3,881,718	-		BT3059	0.79	-0.6