Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2531

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
3,161,751	+		BT2530	0.26	+0.6
3,161,752	-		BT2530	0.26	+1.5
3,161,757	+		BT2530	0.26	+0.3
3,161,758	-		BT2530	0.26	+0.4
3,161,758	-		BT2530	0.26	-1.2
3,161,763	-		BT2530	0.27	-0.4
3,161,840	-		BT2530	0.33	+1.7
3,161,840	-		BT2530	0.33	+0.3
3,161,850	+		BT2530	0.33	-1.3
3,161,979	-		BT2530	0.43	+0.0
3,161,984	-		BT2530	0.43	+0.4
3,161,984	-		BT2530	0.43	+1.5
3,161,984	-		BT2530	0.43	-1.2
3,161,984	-		BT2530	0.43	-0.7
3,162,102	-		BT2530	0.52	-0.9
3,162,102	-				-0.2
3,162,106	+		BT2530	0.53	-0.4
3,162,140	-		BT2530	0.55	-0.0
3,162,193	+		BT2530	0.59	+0.6
3,162,193	+		BT2530	0.59	-0.1
3,162,193	+		BT2530	0.59	+0.0
3,162,193	+		BT2530	0.59	-1.3
3,162,193	+		BT2530	0.59	-0.1
3,162,194	-		BT2530	0.59	-0.4
3,162,194	-		BT2530	0.59	-0.9
3,162,195	+		BT2530	0.59	+0.7
3,162,195	+		BT2530	0.59	+1.0
3,162,196	-		BT2530	0.59	+0.8
3,162,230	-		BT2530	0.62	+0.2
3,162,326	+		BT2530	0.69	+0.6
3,162,329	-		BT2530	0.69	-1.2
3,162,329	-		BT2530	0.69	+1.6
3,162,531	+		BT2530	0.85	-0.1
3,162,556	+		BT2530	0.87	-0.8
3,162,557	-		BT2530	0.87	+0.2
3,162,557	-		BT2530	0.87	-0.5
3,162,684	+				-0.9
3,162,684	+				-0.8
3,162,685	-				+0.4
3,162,740	+				-2.0
3,162,769	+				-1.4
3,162,770	-				-1.0
3,162,775	+				-0.9
3,162,776	-				+1.5
3,162,777	-				-0.7
3,162,868	+				+0.7
3,162,869	-				-1.3
3,162,890	-				-0.7
3,162,891	+				-0.0
3,162,892	-				-1.9
3,162,892	-				-2.7
3,162,918	-				+0.1
3,162,961	-				-0.1
3,162,976	+				+0.6
3,163,036	+				+0.3
3,163,123	+		BT2531	0.12	+1.0
3,163,123	+		BT2531	0.12	-1.3
3,163,133	+		BT2531	0.12	+0.3
3,163,155	-		BT2531	0.13	+1.1
3,163,182	-		BT2531	0.14	+0.6
3,163,277	+		BT2531	0.17	+0.1
3,163,278	-		BT2531	0.17	-0.3
3,163,306	+		BT2531	0.18	-1.4
3,163,429	+		BT2531	0.22	+1.6
3,163,430	-		BT2531	0.22	-0.2
3,163,521	+		BT2531	0.25	+0.4
3,163,521	+		BT2531	0.25	-3.3
3,163,533	+		BT2531	0.25	+0.1
3,163,533	+		BT2531	0.25	+0.1
3,163,534	-		BT2531	0.25	-0.0
3,163,571	-		BT2531	0.26	-0.6
3,163,616	-		BT2531	0.28	-0.5
3,163,652	-		BT2531	0.29	-0.1
3,163,669	+		BT2531	0.29	+0.7
3,163,670	-		BT2531	0.29	+1.1
3,163,670	-		BT2531	0.29	+0.5
3,163,698	+		BT2531	0.30	-0.5
3,163,699	-		BT2531	0.30	-0.0
3,163,701	+		BT2531	0.30	-1.2
3,163,702	-		BT2531	0.30	+0.2
3,163,702	-		BT2531	0.30	+1.0
3,163,705	+		BT2531	0.31	-0.3
3,163,706	-		BT2531	0.31	-0.7
3,163,706	-		BT2531	0.31	+0.0
3,163,783	+		BT2531	0.33	-2.5
3,163,796	+		BT2531	0.33	-2.9
3,163,796	+		BT2531	0.33	+0.3
3,163,797	-		BT2531	0.33	-0.1
3,163,798	+		BT2531	0.33	-0.7
3,163,798	+		BT2531	0.33	-1.2
3,163,799	-		BT2531	0.34	-0.9
3,163,799	-		BT2531	0.34	-0.4
3,163,800	+		BT2531	0.34	-0.2
3,163,800	+		BT2531	0.34	-0.5
3,163,801	-		BT2531	0.34	+1.3
3,163,819	-		BT2531	0.34	-0.7
3,163,827	+		BT2531	0.34	-2.0
3,163,828	-		BT2531	0.34	+0.1
3,163,830	-		BT2531	0.35	-2.0
3,163,847	-		BT2531	0.35	-1.4
3,163,941	-		BT2531	0.38	+0.1
3,163,941	-		BT2531	0.38	-1.9
3,163,943	-		BT2531	0.38	+0.1
3,163,943	-		BT2531	0.38	-0.5
3,163,943	-		BT2531	0.38	+0.3
3,163,943	-		BT2531	0.38	+0.5
3,164,000	+		BT2531	0.40	+0.9
3,164,000	+		BT2531	0.40	+0.3
3,164,000	+		BT2531	0.40	-0.6
3,164,000	+		BT2531	0.40	-0.6
3,164,000	+		BT2531	0.40	-1.4
3,164,040	+		BT2531	0.41	-2.3
3,164,057	+		BT2531	0.42	+0.5
3,164,082	+		BT2531	0.43	-0.7
3,164,083	-		BT2531	0.43	-1.8
3,164,163	+		BT2531	0.45	-1.4
3,164,164	-		BT2531	0.45	-0.1
3,164,164	-		BT2531	0.45	-1.5
3,164,164	-		BT2531	0.45	-1.2
3,164,214	+		BT2531	0.47	+0.1
3,164,214	+		BT2531	0.47	-0.0
3,164,331	-		BT2531	0.51	-2.4
3,164,385	+		BT2531	0.52	+1.0
3,164,386	-		BT2531	0.52	-2.4
3,164,388	+		BT2531	0.52	+0.6
3,164,424	-		BT2531	0.53	-1.5
3,164,434	+		BT2531	0.54	-0.9
3,164,478	-		BT2531	0.55	-3.4
3,164,478	-		BT2531	0.55	-0.9
3,164,478	-		BT2531	0.55	-0.1
3,164,500	-		BT2531	0.56	-0.3
3,164,500	-		BT2531	0.56	-0.2
3,164,526	-		BT2531	0.57	-0.6
3,164,526	-		BT2531	0.57	+0.4
3,164,560	-		BT2531	0.58	-2.7
3,164,598	-		BT2531	0.59	+0.1
3,164,613	-		BT2531	0.60	+1.0
3,164,641	-		BT2531	0.60	+0.6
3,164,646	-		BT2531	0.61	-0.5
3,164,650	+		BT2531	0.61	+0.5
3,164,676	-		BT2531	0.62	-1.2
3,164,706	+		BT2531	0.63	-1.0
3,164,712	-		BT2531	0.63	+0.4
3,164,831	+		BT2531	0.67	-0.2
3,164,831	+		BT2531	0.67	-0.8
3,164,853	-		BT2531	0.67	+1.0
3,165,097	-		BT2531	0.75	+0.1
3,165,106	-		BT2531	0.75	+0.6
3,165,120	+		BT2531	0.76	-0.2
3,165,125	+		BT2531	0.76	-0.2
3,165,126	-		BT2531	0.76	+0.5
3,165,196	-		BT2531	0.78	+0.1
3,165,223	+		BT2531	0.79	+1.4
3,165,245	+		BT2531	0.80	-0.5
3,165,267	-		BT2531	0.80	-1.0
3,165,309	+		BT2531	0.82	-1.0
3,165,324	+		BT2531	0.82	-0.6
3,165,406	-		BT2531	0.85	-0.2
3,165,409	+		BT2531	0.85	-1.2
3,165,460	-		BT2531	0.87	-0.3
3,165,540	+		BT2531	0.89	-1.7
3,165,670	+				+0.3
3,165,671	-				+0.9
3,165,671	-				+0.7
3,165,671	-				+0.3
3,165,671	-				-3.0
3,165,671	-				-0.9
3,165,671	-				-0.1
3,165,696	+				-0.1
3,165,727	+				-0.1
3,165,727	+				-0.3
3,165,728	-				-1.4
3,165,761	+				-2.3
3,165,762	-				+0.3
3,165,772	-				-0.5
3,165,775	+				+0.9
3,165,776	-				-2.9
3,165,830	-				-0.8
3,165,830	-				+0.2
3,165,863	-				-0.3
3,165,864	+				-0.1
3,165,865	-				+0.2
3,165,880	-				+0.5
3,165,880	-				-1.6
3,165,883	+				+0.4
3,165,967	+				-0.0
3,165,967	+				+0.3
3,165,992	-				+1.5
3,165,997	+				+0.4
3,165,998	-				-0.3
3,166,055	+				+1.0
3,166,055	+				+1.5
3,166,056	-				+1.5
3,166,056	-				+0.2
3,166,065	+				-1.9
3,166,065	+				-2.1
3,166,123	-		BT2532	0.11	+0.2
3,166,187	+		BT2532	0.14	+0.7
3,166,187	+		BT2532	0.14	+1.2
3,166,191	+		BT2532	0.14	+0.9
3,166,276	-		BT2532	0.18	-0.5
3,166,448	-		BT2532	0.27	+0.2
3,166,473	+		BT2532	0.28	-2.2
3,166,476	+		BT2532	0.28	+1.1
3,166,477	-		BT2532	0.28	+0.9
3,166,497	+		BT2532	0.29	+0.7
3,166,640	-		BT2532	0.36	+0.4
3,166,722	+		BT2532	0.40	+0.0
3,166,722	+		BT2532	0.40	+0.0
3,166,723	-		BT2532	0.40	+0.2
3,166,801	-		BT2532	0.44	-1.8
3,166,809	+		BT2532	0.45	-1.9
3,166,811	+		BT2532	0.45	-0.6
3,166,815	+		BT2532	0.45	-1.7
3,166,815	+		BT2532	0.45	+1.2
3,166,815	+		BT2532	0.45	-0.2
3,166,816	-		BT2532	0.45	-0.6
3,166,833	-		BT2532	0.46	-0.6