Strain Fitness in Rahnella sp. WP5 around EX31_RS17120

Experiment: L-Glutamine (N); RCH2 media; no shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N); RCH2 media; no shaking
15,735	+				+1.3
15,741	+				+2.4
15,741	+				-0.1
15,741	+				-0.1
15,741	+				-1.2
15,742	-				-0.1
15,742	-				+0.4
15,742	-				+1.0
15,742	-				+1.5
15,742	-				+0.9
15,743	+				+1.2
15,744	-				+1.9
15,744	-				+1.1
15,744	-				-0.8
15,764	+				-0.9
15,765	-				+1.3
15,765	-				-1.1
15,778	+				+1.1
15,778	+				+0.4
15,779	-				+3.3
15,809	+		EX31_RS17115	0.13	-0.2
15,809	+		EX31_RS17115	0.13	-0.5
15,810	-		EX31_RS17115	0.13	+0.0
15,874	+		EX31_RS17115	0.20	-0.4
15,874	+		EX31_RS17115	0.20	+0.5
15,874	+		EX31_RS17115	0.20	+1.7
15,874	+		EX31_RS17115	0.20	+0.1
15,874	+		EX31_RS17115	0.20	-2.1
15,875	-		EX31_RS17115	0.20	+0.2
15,875	-		EX31_RS17115	0.20	-0.5
15,875	-		EX31_RS17115	0.20	+1.8
15,875	-		EX31_RS17115	0.20	-0.5
15,875	-		EX31_RS17115	0.20	-0.2
15,875	-		EX31_RS17115	0.20	+0.3
15,875	-		EX31_RS17115	0.20	+0.9
15,875	-		EX31_RS17115	0.20	-0.1
15,875	-		EX31_RS17115	0.20	+0.5
15,875	-		EX31_RS17115	0.20	+0.4
15,875	-		EX31_RS17115	0.20	+1.4
15,875	-		EX31_RS17115	0.20	+0.1
15,875	-		EX31_RS17115	0.20	+1.2
15,875	-		EX31_RS17115	0.20	+0.4
15,943	-		EX31_RS17115	0.28	-0.4
16,036	+		EX31_RS17115	0.39	+1.0
16,036	+		EX31_RS17115	0.39	-0.6
16,037	-		EX31_RS17115	0.39	+0.7
16,065	+		EX31_RS17115	0.42	-0.7
16,065	+		EX31_RS17115	0.42	-0.3
16,066	-		EX31_RS17115	0.43	-0.2
16,073	+		EX31_RS17115	0.43	+0.4
16,074	-		EX31_RS17115	0.43	-0.9
16,099	+		EX31_RS17115	0.46	-0.9
16,099	+		EX31_RS17115	0.46	+0.3
16,100	-		EX31_RS17115	0.46	+0.7
16,100	-		EX31_RS17115	0.46	+1.4
16,135	-		EX31_RS17115	0.51	+0.9
16,135	-		EX31_RS17115	0.51	+1.3
16,178	+		EX31_RS17115	0.56	+0.9
16,179	-		EX31_RS17115	0.56	+1.6
16,179	-		EX31_RS17115	0.56	+1.3
16,191	+		EX31_RS17115	0.57	+0.8
16,192	-		EX31_RS17115	0.57	+0.7
16,192	-		EX31_RS17115	0.57	-0.1
16,195	+		EX31_RS17115	0.57	+0.8
16,220	-		EX31_RS17115	0.60	+0.7
16,233	+		EX31_RS17115	0.62	+0.3
16,289	-		EX31_RS17115	0.68	-2.2
16,289	-		EX31_RS17115	0.68	+0.5
16,318	-		EX31_RS17115	0.72	+0.7
16,330	+		EX31_RS17115	0.73	-0.5
16,331	-		EX31_RS17115	0.73	+0.1
16,331	-		EX31_RS17115	0.73	-1.8
16,331	-		EX31_RS17115	0.73	+0.9
16,371	+		EX31_RS17115	0.78	+0.2
16,371	+		EX31_RS17115	0.78	+0.5
16,371	+		EX31_RS17115	0.78	+0.9
16,372	-		EX31_RS17115	0.78	-0.0
16,372	-		EX31_RS17115	0.78	+0.1
16,372	-		EX31_RS17115	0.78	-1.2
16,461	+		EX31_RS17115	0.88	-0.1
16,461	+		EX31_RS17115	0.88	+0.1
16,462	-		EX31_RS17115	0.89	-2.5
16,462	-		EX31_RS17115	0.89	+1.4
16,463	+		EX31_RS17115	0.89	-0.1
16,463	+		EX31_RS17115	0.89	-0.5
16,463	+		EX31_RS17115	0.89	-0.3
16,463	+		EX31_RS17115	0.89	+1.8
16,463	+		EX31_RS17115	0.89	+1.0
16,464	-		EX31_RS17115	0.89	-0.7
16,464	-		EX31_RS17115	0.89	+0.3
16,501	-				-0.1
16,501	-				+0.0
16,501	-				+0.1
16,518	+				-0.4
16,518	+				-0.5
16,519	-				-0.8
16,519	-				-0.6
16,519	-				-0.1
16,519	-				-0.7
16,526	+				+1.7
16,526	+				+2.3
16,526	+				+0.1
16,527	-				+0.7
16,550	+				+1.9
16,551	+				+1.7
16,551	+				+0.7
16,551	+				+0.4
16,552	-				-0.5
16,552	-				+1.3
16,552	-				+1.5
16,552	-				-1.1
16,552	-				+1.3
16,560	+				-0.1
16,560	+				+1.5
16,561	-				+0.1
16,561	-				+0.3
16,561	-				-0.2
16,561	-				+0.5
16,561	-				-0.5
16,561	-				+0.9
16,575	-				+0.4
16,609	+				-0.3
16,610	-				+0.3
16,629	+				+2.3
16,633	-				-0.1
16,637	-				+0.6
16,637	-				+0.3
16,640	-				+2.9
16,674	+				-0.3
16,674	+				+0.1
16,690	-				+0.2
16,690	-				+0.7
16,690	-				-1.2
16,690	-				-0.2
16,697	+				+1.4
16,697	+				-1.3
16,698	-				+1.3
16,698	-				-0.7
16,698	-				+0.2
16,698	-				+2.3
16,698	-				-0.3
16,698	-				-0.3
16,719	+				-0.4
16,720	-				+0.3
16,782	+		EX31_RS17120	0.11	-0.1
16,799	+		EX31_RS17120	0.14	+0.3
16,821	+		EX31_RS17120	0.19	+0.3
16,822	-		EX31_RS17120	0.19	-0.4
16,822	-		EX31_RS17120	0.19	-0.8
16,886	-		EX31_RS17120	0.32	-0.8
16,886	-		EX31_RS17120	0.32	+2.3
16,889	-		EX31_RS17120	0.33	-0.8
16,921	+		EX31_RS17120	0.39	-0.1
16,922	-		EX31_RS17120	0.40	-0.3
16,922	-		EX31_RS17120	0.40	+0.3
16,922	-		EX31_RS17120	0.40	+0.2
16,922	-		EX31_RS17120	0.40	-0.9
16,954	+		EX31_RS17120	0.46	-0.8
16,954	+		EX31_RS17120	0.46	-1.3
16,955	-		EX31_RS17120	0.46	-0.3
16,955	-		EX31_RS17120	0.46	+1.7
16,955	-		EX31_RS17120	0.46	+0.4
16,955	-		EX31_RS17120	0.46	-1.3
16,955	-		EX31_RS17120	0.46	+0.4
16,955	-		EX31_RS17120	0.46	+1.0
17,011	+		EX31_RS17120	0.58	+0.6
17,012	-		EX31_RS17120	0.58	+0.7
17,073	+		EX31_RS17120	0.71	+0.8
17,073	+		EX31_RS17120	0.71	-0.7
17,100	+		EX31_RS17120	0.76	+0.0
17,100	+		EX31_RS17120	0.76	+0.8
17,100	+		EX31_RS17120	0.76	-0.1
17,100	+		EX31_RS17120	0.76	-1.2
17,100	+		EX31_RS17120	0.76	+0.9
17,100	+		EX31_RS17120	0.76	+2.3
17,100	+		EX31_RS17120	0.76	-0.2
17,100	+		EX31_RS17120	0.76	+0.3
17,101	-		EX31_RS17120	0.76	-0.5
17,101	-		EX31_RS17120	0.76	+2.3
17,101	-		EX31_RS17120	0.76	-1.3
17,101	-		EX31_RS17120	0.76	+0.2
17,101	-		EX31_RS17120	0.76	+1.2
17,101	-		EX31_RS17120	0.76	+0.4
17,101	-		EX31_RS17120	0.76	+1.3
17,101	-		EX31_RS17120	0.76	+0.4
17,101	-		EX31_RS17120	0.76	+0.7
17,101	-		EX31_RS17120	0.76	-0.0
17,101	-		EX31_RS17120	0.76	+0.9
17,101	-		EX31_RS17120	0.76	-0.3
17,101	-		EX31_RS17120	0.76	-0.6
17,104	+		EX31_RS17120	0.77	+0.3
17,104	+		EX31_RS17120	0.77	+0.7
17,104	+		EX31_RS17120	0.77	-0.1
17,105	-		EX31_RS17120	0.77	-0.8
17,105	-		EX31_RS17120	0.77	+0.9
17,105	-		EX31_RS17120	0.77	+0.4
17,110	+		EX31_RS17120	0.78	+1.3
17,110	+		EX31_RS17120	0.78	+0.7
17,111	-		EX31_RS17120	0.78	-1.1
17,111	-		EX31_RS17120	0.78	+0.8
17,119	-		EX31_RS17120	0.80	+0.8
17,119	-		EX31_RS17120	0.80	-1.3
17,142	+		EX31_RS17120	0.85	+0.7
17,142	+		EX31_RS17120	0.85	+0.2
17,142	+		EX31_RS17120	0.85	-0.7
17,143	-		EX31_RS17120	0.85	+0.7
17,143	-		EX31_RS17120	0.85	-1.3
17,143	-		EX31_RS17120	0.85	-1.3
17,145	+		EX31_RS17120	0.85	+0.3
17,146	-		EX31_RS17120	0.86	-0.4
17,146	-		EX31_RS17120	0.86	-0.1
17,175	-				+2.9
17,175	-				-3.3
17,201	+				+0.2
17,202	-				+1.1
17,202	-				-1.3
17,233	+				-0.5
17,233	+				+0.3
17,234	-				+1.9
17,234	-				+3.9
17,234	-				-0.2
17,234	-				-1.6
17,234	-				-1.0
17,299	+				-1.4
17,302	-				+0.3
17,302	-				-1.3
17,661	+		EX31_RS25515	0.22	-0.5
17,661	+		EX31_RS25515	0.22	-0.6
17,661	+		EX31_RS25515	0.22	+1.2
17,661	+		EX31_RS25515	0.22	-0.3
17,661	+		EX31_RS25515	0.22	+1.3
17,661	+		EX31_RS25515	0.22	+1.7
17,738	+		EX31_RS25515	0.44	+0.5
17,738	+		EX31_RS25515	0.44	+0.7
17,738	+		EX31_RS25515	0.44	+0.4
17,738	+		EX31_RS25515	0.44	+0.8
17,738	+		EX31_RS25515	0.44	-1.1
17,738	+		EX31_RS25515	0.44	+0.1
17,738	+		EX31_RS25515	0.44	+1.4
17,738	+		EX31_RS25515	0.44	-1.0
17,739	-		EX31_RS25515	0.44	-0.3
17,739	-		EX31_RS25515	0.44	-0.1
17,739	-		EX31_RS25515	0.44	+0.5
17,739	-		EX31_RS25515	0.44	+1.5
17,739	-		EX31_RS25515	0.44	-0.8
17,739	-		EX31_RS25515	0.44	-0.1
17,739	-		EX31_RS25515	0.44	-0.5
17,792	+		EX31_RS25515	0.59	-1.0
17,793	-		EX31_RS25515	0.59	+0.0
17,810	+		EX31_RS25515	0.64	-0.5
17,810	+		EX31_RS25515	0.64	-0.0
17,811	-		EX31_RS25515	0.64	-0.2
17,811	-		EX31_RS25515	0.64	+1.7
17,811	-		EX31_RS25515	0.64	-0.8
17,811	-		EX31_RS25515	0.64	+0.7
17,816	+		EX31_RS25515	0.66	-0.5
17,830	+		EX31_RS25515	0.70	-0.4
17,830	+		EX31_RS25515	0.70	+0.2
17,831	-		EX31_RS25515	0.70	+0.7
17,831	-		EX31_RS25515	0.70	+3.5
17,831	-		EX31_RS25515	0.70	-2.3
17,831	-		EX31_RS25515	0.70	-0.5
17,881	+		EX31_RS25515	0.84	+0.4
17,882	-		EX31_RS25515	0.84	+0.3
17,928	-				+0.3
17,928	-				-0.9