Strain Fitness in Ralstonia solanacearum IBSBF1503 around RALBFv3_RS24120

Experiment: M63_quarter_strength

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRALBFv3_RS24110 and RALBFv3_RS24115 are separated by 493 nucleotidesRALBFv3_RS24115 and RALBFv3_RS24120 are separated by 265 nucleotidesRALBFv3_RS24120 and RALBFv3_RS15955 are separated by 131 nucleotides RALBFv3_RS24110: RALBFv3_RS24110 - hypothetical protein, at 14,674 to 14,895 _RS24110 RALBFv3_RS24115: RALBFv3_RS24115 - baseplate assembly protein, at 15,389 to 15,629 _RS24115 RALBFv3_RS24120: RALBFv3_RS24120 - IS5/IS1182 family transposase, at 15,895 to 16,698 _RS24120 RALBFv3_RS15955: RALBFv3_RS15955 - fucose-binding lectin protein, at 16,830 to 17,105 _RS15955 Position (kb) 15 16 17Strain fitness (log2 ratio) -1 0 1at 15.361 kb on - strandat 15.381 kb on - strandat 15.381 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M63_quarter_strength
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15,361 - -0.3
15,381 - -0.6
15,381 - -0.1

Or see this region's nucleotide sequence